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The map label for this gene is nrtB [H]

Identifier: 21241597

GI number: 21241597

Start: 987386

End: 988270

Strand: Reverse

Name: nrtB [H]

Synonym: XAC0827

Alternate gene names: 21241597

Gene position: 988270-987386 (Counterclockwise)

Preceding gene: 21241598

Following gene: 21241596

Centisome position: 19.09

GC content: 69.94

Gene sequence:

>885_bases
ATGAGCCGCAGCACTGCAAGCGCATTGCCACCGATTCCACCGGTGCGGCCCGAGTACGAAGTGGCGCTGACGCCGCTGGA
CCCCGCCCTGGTTGCCGCGACCACGCCCACGCGTTGGCAGGCACCGCCGTGGCTGCGCAAGACATTGGTGCTGGCGGTCT
TGGTTGCGGCATGGGAAATCGCCGCGCGGCTGGTCGGCGACGATCTGATGCTGCCCGGCGCAGGGCAGACCGCGCGCGCG
TTCTACGACGGGCTGCTGTCCGGCGAACTGCTGCGCCGGGTCGGTGCCTCATTGCGGGTGCTGGCGCAGGGTTATGCGCT
GGGCGTGCTGCTGGCGTTCGTGCTGACCGCACTGGCCGCTTCCACACGCTGGGGCCGGGATGTGCTCGGCACGCTGACCG
CCATGTTCAACCCGCTGCCGGCCATTGCGCTGTTGCCGCTGGCCTTGCTGTGGTTCGGGCTGGGCACCGGCAGCCTGGTG
TTCGTGCTGGTGCACTCGGTGCTGTGGCCGCTGGCGCTGACCACCTACGCCGGCTTCCAGGCAGTGCCGGACACGCTGCG
CATGGCCGGGCGCAACTATGGCCTGCGCGGCCCGCGCTACGTGGCGCAGCTGCTGATTCCGGCGGCGCTGCCGGCGATCC
TGTCCGGGCTGAAGATCGGCTGGGCGTTCGCCTGGCGCACCCTGATCGCCGCCGAATTGGTCTTCGGCGCCACCTCCGGC
CAGGGCGGCCTGGGCTGGTACATCTTCCAGAACCGCAACGAGCTTTATACCGACAAGGTGTTCGCGGGGCTGGCGATGGT
GATCGTGCTGGGGCTGCTGGTGGAGGGCGTGGTGTTCCAGGCGGTCGAGCGGCTGACGGTGCGCCGCTGGGGCATGCAGC
GCTAG

Upstream 100 bases:

>100_bases
GCATTCACCGGTTGCTGTTCGATCTGCCCGATGAAACGCTGGATGACGACAAGGTGGCACCGCTGCGTCGCCCGTCCCTG
CGCCAGCGCGAGGCGCTGAC

Downstream 100 bases:

>100_bases
AGCGGCCTCGGCGGTGCGGTCGCGTGCGCTTAACGAGGTTGGCTTATGCTTCGGCCCCCATTCTCTGCCGCTCGCCGCCA
TGCCCACCGCCCCCTTCACC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSRSTASALPPIPPVRPEYEVALTPLDPALVAATTPTRWQAPPWLRKTLVLAVLVAAWEIAARLVGDDLMLPGAGQTARA
FYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLV
FVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAVERLTVRRWGMQR

Sequences:

>Translated_294_residues
MSRSTASALPPIPPVRPEYEVALTPLDPALVAATTPTRWQAPPWLRKTLVLAVLVAAWEIAARLVGDDLMLPGAGQTARA
FYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLV
FVLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAVERLTVRRWGMQR
>Mature_293_residues
SRSTASALPPIPPVRPEYEVALTPLDPALVAATTPTRWQAPPWLRKTLVLAVLVAAWEIAARLVGDDLMLPGAGQTARAF
YDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAASTRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLVF
VLVHSVLWPLALTTYAGFQAVPDTLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATSGQ
GGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAVERLTVRRWGMQR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=237, Percent_Identity=31.2236286919831, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1786564, Length=218, Percent_Identity=29.8165137614679, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31641; Mature: 31510

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSTASALPPIPPVRPEYEVALTPLDPALVAATTPTRWQAPPWLRKTLVLAVLVAAWEI
CCCCCCCCCCCCCCCCCCCEEEECCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
AARLVGDDLMLPGAGQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLVFVLVHSVLWPLALTTYAGFQ
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVPDTLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
HCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAVERLTVRRWGMQR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRSTASALPPIPPVRPEYEVALTPLDPALVAATTPTRWQAPPWLRKTLVLAVLVAAWEI
CCCCCCCCCCCCCCCCCCEEEECCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
AARLVGDDLMLPGAGQTARAFYDGLLSGELLRRVGASLRVLAQGYALGVLLAFVLTALAA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STRWGRDVLGTLTAMFNPLPAIALLPLALLWFGLGTGSLVFVLVHSVLWPLALTTYAGFQ
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AVPDTLRMAGRNYGLRGPRYVAQLLIPAALPAILSGLKIGWAFAWRTLIAAELVFGATSG
HCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QGGLGWYIFQNRNELYTDKVFAGLAMVIVLGLLVEGVVFQAVERLTVRRWGMQR
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]