| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241492
Identifier: 21241492
GI number: 21241492
Start: 861104
End: 861841
Strand: Reverse
Name: 21241492
Synonym: XAC0721
Alternate gene names: NA
Gene position: 861841-861104 (Counterclockwise)
Preceding gene: 21241493
Following gene: 21241491
Centisome position: 16.65
GC content: 63.96
Gene sequence:
>738_bases GTGCTGACCGCCAATATCCAGGCTGGCTCCAGCACCCGCCGTTACAGCGACTATGTGACGCGTAGCTGGTCGCACGCGTT GCCGCTGGGCAGCAAGCGCACCAGCCTGGACAGCATCGCCAAGCTGGTCGGCGAACGCGACATCGTCGGCCTGCAGGAGG CCGACCCCGGCAGCCTGCGCTCGGGTTTCACCAACCAGACCCACTATCTGGCCGAGCGCGCCGGCTTCGATTACTGGAGC CACCAACCCAACCGTCGCATGGGTGGGGTGGCCTCCAGCGCCAACGGTTTGCTGAGCAAGCTCGAACCGGTGGAAGTGCA GGACCATGCCCTGCCCGGCCGCATCGGCGGACGCGGCATCCTGCTGGCGAAATTCGGTGAGGGCCGCGATGGCCTGGCCG TGGCGGTGGCGCATCTGTCGCTGGGCGCCAATTCGCGCATGGCGCAGCTGGCCTTCATCGCCGAACTGTTGTCCGACCAT CCCAACGCCATGTTGATGGGCGATTTCAATTGCATGGCCGATCGACCGGAGATGCAGTCGCTCTATCGCCATACCCGTCT GCAACCGCCGAGCTGCGACGTGCACACCTTTCCCAGCTGGCGTCCAGACCGGGCGATCGACCACATCCTGGTCAGCGACA GCCTGGTGATCGAACATACCGAAGCGATTCCGGCCGCGTTTTCAGATCATCTGGCAGTGGGGATGGATATCCGCGTACCA AAGCAATTGCTGCGTTAA
Upstream 100 bases:
>100_bases CGCATTGCCGATCACCTGATCGCGCGCGAACGCGCCACGCTGGCCAAGTGAGTCGCGCGAACGCAACGTCGTGAACGCTT CGGACTCGCGCACCCTGCGG
Downstream 100 bases:
>100_bases GAGCAGCCAACAGAACTCCTGCGCAGCCGCCAGGCGGGCGCGGCCGGTGCTCGGAATCCTCTTGTATCACTCGTCCACTC CAGTTCTGAGCGCGCCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGERDIVGLQEADPGSLRSGFTNQTHYLAERAGFDYWS HQPNRRMGGVASSANGLLSKLEPVEVQDHALPGRIGGRGILLAKFGEGRDGLAVAVAHLSLGANSRMAQLAFIAELLSDH PNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCDVHTFPSWRPDRAIDHILVSDSLVIEHTEAIPAAFSDHLAVGMDIRVP KQLLR
Sequences:
>Translated_245_residues MLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGERDIVGLQEADPGSLRSGFTNQTHYLAERAGFDYWS HQPNRRMGGVASSANGLLSKLEPVEVQDHALPGRIGGRGILLAKFGEGRDGLAVAVAHLSLGANSRMAQLAFIAELLSDH PNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCDVHTFPSWRPDRAIDHILVSDSLVIEHTEAIPAAFSDHLAVGMDIRVP KQLLR >Mature_245_residues MLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGERDIVGLQEADPGSLRSGFTNQTHYLAERAGFDYWS HQPNRRMGGVASSANGLLSKLEPVEVQDHALPGRIGGRGILLAKFGEGRDGLAVAVAHLSLGANSRMAQLAFIAELLSDH PNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCDVHTFPSWRPDRAIDHILVSDSLVIEHTEAIPAAFSDHLAVGMDIRVP KQLLR
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26832; Mature: 26832
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGERDIVGLQEADPGSLR CEEECCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH SGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHALPGRIGGRGI CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE LLAKFGEGRDGLAVAVAHLSLGANSRMAQLAFIAELLSDHPNAMLMGDFNCMADRPEMQS EEEECCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHCCCCHHHHH LYRHTRLQPPSCDVHTFPSWRPDRAIDHILVSDSLVIEHTEAIPAAFSDHLAVGMDIRVP HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECHHHHHHHHCCEEECCCCCCH KQLLR HHHCC >Mature Secondary Structure MLTANIQAGSSTRRYSDYVTRSWSHALPLGSKRTSLDSIAKLVGERDIVGLQEADPGSLR CEEECCCCCCCCHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH SGFTNQTHYLAERAGFDYWSHQPNRRMGGVASSANGLLSKLEPVEVQDHALPGRIGGRGI CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE LLAKFGEGRDGLAVAVAHLSLGANSRMAQLAFIAELLSDHPNAMLMGDFNCMADRPEMQS EEEECCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHCCCCHHHHH LYRHTRLQPPSCDVHTFPSWRPDRAIDHILVSDSLVIEHTEAIPAAFSDHLAVGMDIRVP HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECHHHHHHHHCCEEECCCCCCH KQLLR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA