| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241480
Identifier: 21241480
GI number: 21241480
Start: 841098
End: 843494
Strand: Direct
Name: 21241480
Synonym: XAC0709
Alternate gene names: NA
Gene position: 841098-843494 (Clockwise)
Preceding gene: 21241479
Following gene: 21241481
Centisome position: 16.25
GC content: 64.58
Gene sequence:
>2397_bases ATGACCTTTTCACTGTTTTCCTCATCGTCGCCTGCGCGCCTGTTCGCCGTGGTGCTGGGCGCGTTGCTCGCCACTCCCGT CTCCGTGCTGGCGGCATCGCCCGCGCAGGCGGTCGTGCAACGCCTGATCGGCGCGCGTGCCGCCCAGTTCGACATGACCG TCGCACCGCGTGGCGATGGTGCAGACTGGTATCGCATCGACGCCGGCGGCGACACGGTGCGCATCGCCGGCTCCTCGCAA GTGGCCTTGGCGCGTGGCGCCTATGCGTATCTCGGTCAAGCAGGTGCGGCCTCGATGAGTTGGGAGGGCGACCGCGTGGC GCTGCCAGCGCAATGGCCGGCCTACCGCAGTGGTCAAGTGCGCACGCCATTTGCCCACCGCGCCTATCTCAATACCTGCA CCTACGGCTACACCACGCCGTTCTGGGATTGGCCGCGCTGGCAGCGCGAGATCGACTGGATGGCCTTGCATGGCATCGAC ATGCCGCTGGCGATGGAAGGCCAGGAAGCGATCTGGCAAGCGTTGTGGCGCGAGTTCGATGTCGGCGATGACGCGCTGGC GGAGTATTTTTCCGGCCGGGCGTTCACGCCGTGGCAGCGCATGGGCAATATCGAAGGCTATCGCGCACCGCTGCCGCAAC ACTGGATCGATAGCAAACGCGTGCTGCAGAAGCAGATCCTGACGCGCATGCGCGAGTTGGGCATGCAGCCGGTGCTGCCC GCATTTGCCGGCTACGTGCCCAGGGCGTTCGCGCAGGCGCATCCGCATGCGCGCATCTATCGCATGCGCGCCTGGGAAGG CTTTCACGAGACCTATTGGCTGGATCCGCGCGATCCGCTGTTTGCCAAGCTCGCGCGGCGCTTCCTTGAGCTGTACGCCC AGACCTACGGCGCAGGCGAGTTCTACCTGGCCGATGCCTTCAACGAAATGCTGCCACCCGTGGCCGACGATGGCAGCGAC GTGGCCGCCGCCAGGTACGGCGACAGCATCGCCAACTCCGATGCTGCGCGGGCAAAAGCGGTACCGCCAGCGCAACGCGA TGCACGCCTGGCCGAATACGGGCAGGCGTTGTATCGCTCCATCGCGCAGGTGAATCCGAAGGCCACCTGGGTGATGCAGG GCTGGCTGTTCGGTGCCGACCGCCAGTTCTGGCAAGCGCAGGCGATCGCTGCGTTTCTCGGCAAGGTGCCCGACGCGCGC TTGATGGTGCTTGACATCGGCAACGACCGCTATCCCGGTACCTGGAAGGCATCGCGGGCCTTCGACAACAAGCAGTGGAT CTACGGCTACGTGCACAACTATGGCGCTAGCAATCCGTTGTACGGCGATTTCGCGTTCTATCGGCACGATCTGCAAGCCT TGCTGGCCGATCCGGACAAACGCAATCTGCGCGGCTTCGGCGTGTTTCCGGAAGGCCTGCACAGCAACTCGGTGATCTAC GAGTATCTCTACGCGCTGGCCTGGGAAGGCCCGCAACAATCGTGGTCGCAGTGGCTCACGCACTATCTGCGCGCGCGCTA CGGCCGCAGCGATGCTGCATTACTGAGCGCATGGTCTGATCTGGAAGCAGGCATCTACCAGACCCGTTACTGGTCGCCAC GCTGGTGGAACAAGCGTGCCGGTGCCTACCTGCTGTTCAAGCGGCCGACTGCCGACATCGTCGATTTCGACGATCGTCCT GGCGACCCGCAACGCCTGCGCCGCGCCATCGATGCGTTGCTGCGGCAGGCCAACCGTTATGCAGATGCGCCGCTGTATCG CTACGATTTGATCGAAGACGCACGCCATTACCTGAGCCTGCAGGCCGACCGTCAATTGCAGGCAGTGGTGCAGGCCTATG ATGCCGGCGATTTCGCGCGCGGCGATGCGCAGCTGGCGCGCACCACGCAACTGGTGCGGGGACTGGATGCGCTGGTTGGC GGTCAACACGAAACCTTGGCCGACTGGACCGGCCAGGCCGCCGCTGCGGCCGGCCACGATGCCGGATTGCGGCGCGCCTA TGTCGGCAATGCGCGAGCGCAGGTCAGTGTCTGGGGCGGCGACGGCAACCTTGCTGATTACGCGTCCAAGGCGTGGCAGG GCATGTACGCAGACTTCTATCTGCAGCGTTGGACGCGCTTTCTCAGCGCGTATCGTGCTGCACGCAAGGCCGGCACGCCG TTCGATGCGGTGGCCGTGGATCACCAGCTTGCAACATGGGAACGCCAATGGTCCGCGCAGGACGAGATGTCGAAGCGTCA GCCGCCACGTGAGCCACTGAGCTTGCTGCACACCTTGCTGGCACAGGTAGATGCGCACGATCCAAGGCAACGCGCTTCGC AGGATCGCGGGCCAGACGCGCGGCAGGAAAGTGCATCCGTTGGCGTTCACAGCACTACGCAAGGGGTCGCTCAATGA
Upstream 100 bases:
>100_bases CCGCGGCCGGCGAGCGCACCCTGGCGGTGATTCTGCAGGTCGCTGCCGATCAGCCATTTGGATTCCACGACGTCGTCACC GTGCATTATCGGAACCCGCC
Downstream 100 bases:
>100_bases ACGCATCCGTGTTGCGCGTGGCGTTCATGCCGGAGCGCAGTTGCGTCGATGCAAGAGCCCAGACCACCAGGTGTGCATGT CGCATCCACCTCTATGACGT
Product: N-acetylglucosaminidase
Products: NA
Alternate protein names: Alpha-N-Acetylglucosaminidase Family Protein; N-Acetylglucosaminidase; Truncated N-Acetylglucosaminidase; LOW QUALITY PROTEIN Alpha-N-Acetylglucosaminidase; Glycoside Hydrolase Family
Number of amino acids: Translated: 798; Mature: 797
Protein sequence:
>798_residues MTFSLFSSSSPARLFAVVLGALLATPVSVLAASPAQAVVQRLIGARAAQFDMTVAPRGDGADWYRIDAGGDTVRIAGSSQ VALARGAYAYLGQAGAASMSWEGDRVALPAQWPAYRSGQVRTPFAHRAYLNTCTYGYTTPFWDWPRWQREIDWMALHGID MPLAMEGQEAIWQALWREFDVGDDALAEYFSGRAFTPWQRMGNIEGYRAPLPQHWIDSKRVLQKQILTRMRELGMQPVLP AFAGYVPRAFAQAHPHARIYRMRAWEGFHETYWLDPRDPLFAKLARRFLELYAQTYGAGEFYLADAFNEMLPPVADDGSD VAAARYGDSIANSDAARAKAVPPAQRDARLAEYGQALYRSIAQVNPKATWVMQGWLFGADRQFWQAQAIAAFLGKVPDAR LMVLDIGNDRYPGTWKASRAFDNKQWIYGYVHNYGASNPLYGDFAFYRHDLQALLADPDKRNLRGFGVFPEGLHSNSVIY EYLYALAWEGPQQSWSQWLTHYLRARYGRSDAALLSAWSDLEAGIYQTRYWSPRWWNKRAGAYLLFKRPTADIVDFDDRP GDPQRLRRAIDALLRQANRYADAPLYRYDLIEDARHYLSLQADRQLQAVVQAYDAGDFARGDAQLARTTQLVRGLDALVG GQHETLADWTGQAAAAAGHDAGLRRAYVGNARAQVSVWGGDGNLADYASKAWQGMYADFYLQRWTRFLSAYRAARKAGTP FDAVAVDHQLATWERQWSAQDEMSKRQPPREPLSLLHTLLAQVDAHDPRQRASQDRGPDARQESASVGVHSTTQGVAQ
Sequences:
>Translated_798_residues MTFSLFSSSSPARLFAVVLGALLATPVSVLAASPAQAVVQRLIGARAAQFDMTVAPRGDGADWYRIDAGGDTVRIAGSSQ VALARGAYAYLGQAGAASMSWEGDRVALPAQWPAYRSGQVRTPFAHRAYLNTCTYGYTTPFWDWPRWQREIDWMALHGID MPLAMEGQEAIWQALWREFDVGDDALAEYFSGRAFTPWQRMGNIEGYRAPLPQHWIDSKRVLQKQILTRMRELGMQPVLP AFAGYVPRAFAQAHPHARIYRMRAWEGFHETYWLDPRDPLFAKLARRFLELYAQTYGAGEFYLADAFNEMLPPVADDGSD VAAARYGDSIANSDAARAKAVPPAQRDARLAEYGQALYRSIAQVNPKATWVMQGWLFGADRQFWQAQAIAAFLGKVPDAR LMVLDIGNDRYPGTWKASRAFDNKQWIYGYVHNYGASNPLYGDFAFYRHDLQALLADPDKRNLRGFGVFPEGLHSNSVIY EYLYALAWEGPQQSWSQWLTHYLRARYGRSDAALLSAWSDLEAGIYQTRYWSPRWWNKRAGAYLLFKRPTADIVDFDDRP GDPQRLRRAIDALLRQANRYADAPLYRYDLIEDARHYLSLQADRQLQAVVQAYDAGDFARGDAQLARTTQLVRGLDALVG GQHETLADWTGQAAAAAGHDAGLRRAYVGNARAQVSVWGGDGNLADYASKAWQGMYADFYLQRWTRFLSAYRAARKAGTP FDAVAVDHQLATWERQWSAQDEMSKRQPPREPLSLLHTLLAQVDAHDPRQRASQDRGPDARQESASVGVHSTTQGVAQ >Mature_797_residues TFSLFSSSSPARLFAVVLGALLATPVSVLAASPAQAVVQRLIGARAAQFDMTVAPRGDGADWYRIDAGGDTVRIAGSSQV ALARGAYAYLGQAGAASMSWEGDRVALPAQWPAYRSGQVRTPFAHRAYLNTCTYGYTTPFWDWPRWQREIDWMALHGIDM PLAMEGQEAIWQALWREFDVGDDALAEYFSGRAFTPWQRMGNIEGYRAPLPQHWIDSKRVLQKQILTRMRELGMQPVLPA FAGYVPRAFAQAHPHARIYRMRAWEGFHETYWLDPRDPLFAKLARRFLELYAQTYGAGEFYLADAFNEMLPPVADDGSDV AAARYGDSIANSDAARAKAVPPAQRDARLAEYGQALYRSIAQVNPKATWVMQGWLFGADRQFWQAQAIAAFLGKVPDARL MVLDIGNDRYPGTWKASRAFDNKQWIYGYVHNYGASNPLYGDFAFYRHDLQALLADPDKRNLRGFGVFPEGLHSNSVIYE YLYALAWEGPQQSWSQWLTHYLRARYGRSDAALLSAWSDLEAGIYQTRYWSPRWWNKRAGAYLLFKRPTADIVDFDDRPG DPQRLRRAIDALLRQANRYADAPLYRYDLIEDARHYLSLQADRQLQAVVQAYDAGDFARGDAQLARTTQLVRGLDALVGG QHETLADWTGQAAAAAGHDAGLRRAYVGNARAQVSVWGGDGNLADYASKAWQGMYADFYLQRWTRFLSAYRAARKAGTPF DAVAVDHQLATWERQWSAQDEMSKRQPPREPLSLLHTLLAQVDAHDPRQRASQDRGPDARQESASVGVHSTTQGVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66346698, Length=707, Percent_Identity=32.2489391796322, Blast_Score=333, Evalue=3e-91, Organism=Caenorhabditis elegans, GI32564213, Length=592, Percent_Identity=28.0405405405405, Blast_Score=230, Evalue=3e-60, Organism=Drosophila melanogaster, GI21356587, Length=748, Percent_Identity=28.6096256684492, Blast_Score=321, Evalue=1e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89716; Mature: 89585
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSLFSSSSPARLFAVVLGALLATPVSVLAASPAQAVVQRLIGARAAQFDMTVAPRGDG CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCEEEECCCCCC ADWYRIDAGGDTVRIAGSSQVALARGAYAYLGQAGAASMSWEGDRVALPAQWPAYRSGQV CCEEEEECCCCEEEEECCCCEEHHHCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC RTPFAHRAYLNTCTYGYTTPFWDWPRWQREIDWMALHGIDMPLAMEGQEAIWQALWREFD CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCEECCHHHHHHHHHHHCC VGDDALAEYFSGRAFTPWQRMGNIEGYRAPLPQHWIDSKRVLQKQILTRMRELGMQPVLP CCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHH AFAGYVPRAFAQAHPHARIYRMRAWEGFHETYWLDPRDPLFAKLARRFLELYAQTYGAGE HHHHHHHHHHHHCCCCHHEEEEHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCC FYLADAFNEMLPPVADDGSDVAAARYGDSIANSDAARAKAVPPAQRDARLAEYGQALYRS EEHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH IAQVNPKATWVMQGWLFGADRQFWQAQAIAAFLGKVPDARLMVLDIGNDRYPGTWKASRA HHHCCCCEEEEEECEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHC FDNKQWIYGYVHNYGASNPLYGDFAFYRHDLQALLADPDKRNLRGFGVFPEGLHSNSVIY CCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH EYLYALAWEGPQQSWSQWLTHYLRARYGRSDAALLSAWSDLEAGIYQTRYWSPRWWNKRA HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCC GAYLLFKRPTADIVDFDDRPGDPQRLRRAIDALLRQANRYADAPLYRYDLIEDARHYLSL CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QADRQLQAVVQAYDAGDFARGDAQLARTTQLVRGLDALVGGQHETLADWTGQAAAAAGHD CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHCCCH AGLRRAYVGNARAQVSVWGGDGNLADYASKAWQGMYADFYLQRWTRFLSAYRAARKAGTP HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FDAVAVDHQLATWERQWSAQDEMSKRQPPREPLSLLHTLLAQVDAHDPRQRASQDRGPDA HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC RQESASVGVHSTTQGVAQ HHHHCCCCCCCCHHHCCC >Mature Secondary Structure TFSLFSSSSPARLFAVVLGALLATPVSVLAASPAQAVVQRLIGARAAQFDMTVAPRGDG EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCEEEECCCCCC ADWYRIDAGGDTVRIAGSSQVALARGAYAYLGQAGAASMSWEGDRVALPAQWPAYRSGQV CCEEEEECCCCEEEEECCCCEEHHHCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC RTPFAHRAYLNTCTYGYTTPFWDWPRWQREIDWMALHGIDMPLAMEGQEAIWQALWREFD CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEEEECCCCCCEECCHHHHHHHHHHHCC VGDDALAEYFSGRAFTPWQRMGNIEGYRAPLPQHWIDSKRVLQKQILTRMRELGMQPVLP CCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHH AFAGYVPRAFAQAHPHARIYRMRAWEGFHETYWLDPRDPLFAKLARRFLELYAQTYGAGE HHHHHHHHHHHHCCCCHHEEEEHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCC FYLADAFNEMLPPVADDGSDVAAARYGDSIANSDAARAKAVPPAQRDARLAEYGQALYRS EEHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH IAQVNPKATWVMQGWLFGADRQFWQAQAIAAFLGKVPDARLMVLDIGNDRYPGTWKASRA HHHCCCCEEEEEECEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHC FDNKQWIYGYVHNYGASNPLYGDFAFYRHDLQALLADPDKRNLRGFGVFPEGLHSNSVIY CCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH EYLYALAWEGPQQSWSQWLTHYLRARYGRSDAALLSAWSDLEAGIYQTRYWSPRWWNKRA HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCC GAYLLFKRPTADIVDFDDRPGDPQRLRRAIDALLRQANRYADAPLYRYDLIEDARHYLSL CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QADRQLQAVVQAYDAGDFARGDAQLARTTQLVRGLDALVGGQHETLADWTGQAAAAAGHD CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHCCCH AGLRRAYVGNARAQVSVWGGDGNLADYASKAWQGMYADFYLQRWTRFLSAYRAARKAGTP HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FDAVAVDHQLATWERQWSAQDEMSKRQPPREPLSLLHTLLAQVDAHDPRQRASQDRGPDA HHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC RQESASVGVHSTTQGVAQ HHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA