| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241481
Identifier: 21241481
GI number: 21241481
Start: 843610
End: 844776
Strand: Direct
Name: 21241481
Synonym: XAC0710
Alternate gene names: NA
Gene position: 843610-844776 (Clockwise)
Preceding gene: 21241480
Following gene: 21241482
Centisome position: 16.3
GC content: 64.18
Gene sequence:
>1167_bases ATGAGCGCACACAGGCCCGCGGCTGCCACTCCCGCTGCAGCCGCACCGTCAAAGCGCGAACGCTTCCTCTCACTGGATGT GTTCCGCGGCCTGACCATCTTCCTGATGATTCTGGTCAACACCGCAGGGCCGGGCGCTCAGGCGTACGCGCAGCTGACCC ACGCGGCTTGGTTCGGCTTCACGCTGGCCGATCTGGTGTTTCCTTCGTTCCTGTTCGCGGTTGGGAGCGCGATGAGTTTT GCGCTGGCAACCAACACGCCGCATCTGCAGTTCCTCGGCCGTGTGAGCAGGCGCGCCGCGCTGATCCTGCTATGCGGTGT GCTGATGTACTGGTTTCCTTTTTTCCATCTGCAGCCAGATGGTGGATGGGCGTTCACGACGGTCGATCAACTTCGCCTGA CCTGCGTATTGCAACGGATCGGCCTGTGCTACCTGGCGGCGGCATTGCTGGTGCGCTATCTGCCACCGCGCGGCATCGCG CCTGTCTGCTTAGCACTGCTGTTGGGCTATTGGGCGTTGTTGTACGCCTTCGGCCAACCTGGCGCGGAATTGAGCAAGAC CGGCAATGCCGGCACTCGCCTGGATCTGTGGCTGTACGGGCGTGATCATCTGTACCGCAAGGACGGCGGCTTCGATCCTG AAGGCTTGCTCGGCACGCTGTCGGCCACGGTCAATGTGCTGGCCGGTTATCTGTGCGGGCGCTTCCTGCAGCGACATGGC AAGACCATTGCCAGCACGCGCAGCTTGTTGTTGGCGGGCGCAGGTCTGGTGCTGCTGGCGCTGCTCTGGGCACCGGCCTG GCCGTTGTCGAAGAAGCTCTGGAGCGGCTCGTTCGTCGCCTGCACGGTGGGCCTGGATCTGCTGGCGCTGGGTGCACTGG TATACCTGCTGGAATTGCGCGGCTGGACCGGCGGCAGCGGTTTCTTCACCGTCCTGGGGCGCAACCCGCTGGCGATCTAC CTGTTCTCCGAATTGTTCGTGGTGGTGTTGCGGCTGATCCCGGCCGGAAGCTCCGGGCTGGACCTGTACGCCTGGGCCGG CATCGGCGTGTTCCAGACCATTGCGCCAGGACCACTCGGCTCGCTGCTGTGCGCGCTGAGCTACACGCTGATGTGCTGCG CGGTGGGTTGGTGGATGGATCGGCGGCGCTGGTACCTGCGGCTGTGA
Upstream 100 bases:
>100_bases GCGTGGCGTTCATGCCGGAGCGCAGTTGCGTCGATGCAAGAGCCCAGACCACCAGGTGTGCATGTCGCATCCACCTCTAT GACGTGGGCGAGGGCGTGCA
Downstream 100 bases:
>100_bases TCGCATCGCCCATCCGGCGACGGGCCAGGGTGCAAAGCACTGACCAGCTCGGCCATGGCTGCACGATGCCCACCCGTGGC AGCGGTCAATGTGGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSAHRPAAATPAAAAPSKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGFTLADLVFPSFLFAVGSAMSF ALATNTPHLQFLGRVSRRAALILLCGVLMYWFPFFHLQPDGGWAFTTVDQLRLTCVLQRIGLCYLAAALLVRYLPPRGIA PVCLALLLGYWALLYAFGQPGAELSKTGNAGTRLDLWLYGRDHLYRKDGGFDPEGLLGTLSATVNVLAGYLCGRFLQRHG KTIASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGALVYLLELRGWTGGSGFFTVLGRNPLAIY LFSELFVVVLRLIPAGSSGLDLYAWAGIGVFQTIAPGPLGSLLCALSYTLMCCAVGWWMDRRRWYLRL
Sequences:
>Translated_388_residues MSAHRPAAATPAAAAPSKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGFTLADLVFPSFLFAVGSAMSF ALATNTPHLQFLGRVSRRAALILLCGVLMYWFPFFHLQPDGGWAFTTVDQLRLTCVLQRIGLCYLAAALLVRYLPPRGIA PVCLALLLGYWALLYAFGQPGAELSKTGNAGTRLDLWLYGRDHLYRKDGGFDPEGLLGTLSATVNVLAGYLCGRFLQRHG KTIASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGALVYLLELRGWTGGSGFFTVLGRNPLAIY LFSELFVVVLRLIPAGSSGLDLYAWAGIGVFQTIAPGPLGSLLCALSYTLMCCAVGWWMDRRRWYLRL >Mature_387_residues SAHRPAAATPAAAAPSKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGFTLADLVFPSFLFAVGSAMSFA LATNTPHLQFLGRVSRRAALILLCGVLMYWFPFFHLQPDGGWAFTTVDQLRLTCVLQRIGLCYLAAALLVRYLPPRGIAP VCLALLLGYWALLYAFGQPGAELSKTGNAGTRLDLWLYGRDHLYRKDGGFDPEGLLGTLSATVNVLAGYLCGRFLQRHGK TIASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGALVYLLELRGWTGGSGFFTVLGRNPLAIYL FSELFVVVLRLIPAGSSGLDLYAWAGIGVFQTIAPGPLGSLLCALSYTLMCCAVGWWMDRRRWYLRL
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=366, Percent_Identity=28.1420765027322, Blast_Score=105, Evalue=6e-23, Organism=Drosophila melanogaster, GI24639786, Length=361, Percent_Identity=31.5789473684211, Blast_Score=120, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42131; Mature: 42000
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHRPAAATPAAAAPSKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TLADLVFPSFLFAVGSAMSFALATNTPHLQFLGRVSRRAALILLCGVLMYWFPFFHLQPD HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GGWAFTTVDQLRLTCVLQRIGLCYLAAALLVRYLPPRGIAPVCLALLLGYWALLYAFGQP CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC GAELSKTGNAGTRLDLWLYGRDHLYRKDGGFDPEGLLGTLSATVNVLAGYLCGRFLQRHG CCHHHCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KTIASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGALVYLLELR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHC GWTGGSGFFTVLGRNPLAIYLFSELFVVVLRLIPAGSSGLDLYAWAGIGVFQTIAPGPLG CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCHHH SLLCALSYTLMCCAVGWWMDRRRWYLRL HHHHHHHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure SAHRPAAATPAAAAPSKRERFLSLDVFRGLTIFLMILVNTAGPGAQAYAQLTHAAWFGF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TLADLVFPSFLFAVGSAMSFALATNTPHLQFLGRVSRRAALILLCGVLMYWFPFFHLQPD HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC GGWAFTTVDQLRLTCVLQRIGLCYLAAALLVRYLPPRGIAPVCLALLLGYWALLYAFGQP CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC GAELSKTGNAGTRLDLWLYGRDHLYRKDGGFDPEGLLGTLSATVNVLAGYLCGRFLQRHG CCHHHCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC KTIASTRSLLLAGAGLVLLALLWAPAWPLSKKLWSGSFVACTVGLDLLALGALVYLLELR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHC GWTGGSGFFTVLGRNPLAIYLFSELFVVVLRLIPAGSSGLDLYAWAGIGVFQTIAPGPLG CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCCCHHH SLLCALSYTLMCCAVGWWMDRRRWYLRL HHHHHHHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA