| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fepA [C]
Identifier: 21241424
GI number: 21241424
Start: 770974
End: 773364
Strand: Direct
Name: fepA [C]
Synonym: XAC0653
Alternate gene names: 21241424
Gene position: 770974-773364 (Clockwise)
Preceding gene: 21241423
Following gene: 21241427
Centisome position: 14.9
GC content: 66.54
Gene sequence:
>2391_bases ATGCACATGGCAGCAGGCAGATGCAGGACAGCGACGCTGCATCGCACGGGATTGGCAGGCGCATGGGCCATGACCCTGCT CGCACGCAGCGCATTGGCCGTTGCAGCGGAAGCACCGCAAGTCACCTGGTTGGACCGTATCGAGGTCACCGCCACGCCGA TCCCCGGCACCACCATCGATGCGGCGCAATTGCCGTACATGGTGCAGTCGGCAAGCAACGCCGAGCTGTCGCGTGGGCGC AGCAACAACCTGAGCGATCTGCTGCAGCGGCGCTTCGTCGGCGTGGACGGCAACGACGTGCAGGGCAGCGCGTTCCAGAA CGATCTCACCTTCCACGGCTTTCGCGCTTCTGCCTTGCCGGGCGCTTCGCAAGGGGTGTCGGTGTATCTGGATGGCGTAC GGTTCAACGAACCGTTCGCCGATATCGTCAGTTGGGACATGCTGCCCGAAGCGGCGATCACCGCGATGACGCTGATGCCG GGTTCCAACCCGTTGTTCGGGCCGAACACGCTGGGCGGCGCGGTGGTGCTGTCTACCGCGTCGGGGCTGACCGCACCGGG AGTACAGGGCGAATTGAGTATCGGCAGCGGTGCGCGCAAGCGGCTGGATGCCGGTTACGGCGTCGCCGGCGCCGACGGCT GGCATGGCTTCGTTGCGGTGACCGGCTTCGACGAAAACGGCTGGCGTGCTGCCTCCGAAGGCCGGCTTGGCACCGTGTTC GGCAAGGTCGGTCGGCAAGGCGAGCAGACCGACTGGAGCCTGTCGCTGCTGCACGGGCGCAGCCGTCTGATCGGCAATGG CCTGCTGCCGGACACGCGGTATACCGACGAGGGGCCAGAGCCCGGCTTGTATCGCGCCGATCGGCGTTCGGTGTATACCT CGCCCGATCTCACCCGCAATCGCAACACCTTATTGACCGTGCAGCTGGACCATCGTTTCGATGCAGACACTGCGTTGCAC GCCCTCGCTTATTCGCGCGTAGGGCGCCGCGACACCGTCAATGGCGATATCGGCGAAGACTACGAAGCGTTCGTCGAAGA ATGCGCGTCCGGTTACGCGGCCGATGGCAGCGCACTGGATGCCGAGTGCGATGTCGCCCGCACCGATGCCGACACGTTGC ACACCGGCGCGCTCAACACCACCCAGATGCGTCAGCAAGCACAGGGCGTCGCGCTCAACCTGAGCATGCAGCGGGGCGCG CATGCGCTCACGGCCGGTGTCACCTTCGATCGCGGCCATGTGCGTTACCGGCAGTTCGCCCGCGATGGCTGGGTGCAGCC CGACCGCTCGGTCGCTGCCGATCCCGATGCCGAACGCGCCTTCTTCTCCGGTGTACGCGGCAGCACCGAGACGCTGGGCA TGTTCCTCGCCGACACCTGGGCGCTGAGCAATGCGACCCATCTCACCGCTGCAGTGCGCTGGAATCGTGTGGTGGTGGAC AACATTCTTTCCACCGCCGACGACGGCGACCGCCCACGCGAGCGCTTCGTCTATGCCAAGGCCCACCCGTCGTTGGGCCT TACGCATCGGCTCGATTCGGGGCTGACGCTGTACGGCTCGGTCGCGCAGAACAGCCGTGCACCGACCGCCATCGAATTGG GCTGCGCCGATCCCACCCAGCCCTGTCGGTTGCCGACCGGCCTGCAGGCCGATCCGCGGCTGGAGCAGATCATCTCGCGC ACCTACGAACTGGGCGCGAGCTGGACGCCGTCGGCCGACCGCAACGCCACGCTGTCGGTCTACCGCGCCGACAATCGCGA CGACATTCTGTTTCTACGCGCACCGGATACGCAATTGGGCTACTTCGACAATGTCGGCCGCACGCGCTATCAGGGCGTGG ACGCGGCACTGCATCTGCGCAGCGGCGATTGGCAGTGGTGGGCCGGCTACAGCTACCTGGATGCCACTTACCGCAGCGGT GGCCAATTGCTGTCCGGCGAGCGCGTGATCGCGCTGCGGCCGGGCCTGCGGATCGCCGCGCTACCGCGGCACAACCTCAA GCTCGGGATGGCGTGGCAGCGCGATGCGCTGACGCTGGGCGTAGGCGTGCGTGCGGTCTCCGGGCGGGTGGCCAGCGGCA ACGAAGATGGCCAGGTCGACAATGCCGAAGAAGGCCAGACCGCACCCGAGCGCCTCGACATCGGCAGCGCCGGCTATGCC CTGGTCGACCTGCAGGCGCGCTGGACCATCAACGCGCGGGTGTCGCTGTTCGCCCGGATCGACAACGTCTTCGACCGCCA CTACGCCACCTATGCCGCCGTGGCCGAAGACGTGTTTCCCGACGGCGAACTCGCACGTCCGCAGGATGCGCCAGTGGAAA CCGGCCCGGCACGCTTTCTCGCACCTGGTGTGCCGCGACAGTATTTGATTGGGTTGCGTTGGGCGCTTTGA
Upstream 100 bases:
>100_bases CGTTGATCACGCGCACGCTGGCGCTGGATGACATCAACCAGGCGTTGACGGACCTGCGTGCGGCGCGCGGCATCAAATCC ATCGTGGCGTATTGAAGGAG
Downstream 100 bases:
>100_bases CTACGGGAATGGGGAATCGGGAATGGGGAATCGTAGAGCGTCAGCGAACTGCTTTTCTCCATTCCCGATTCCCGATTCCC GATTCCCGATTCCCCATTCA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor YncD; Nb-Dependent Receptor; OM Receptor nB; Iron Transporter; NB Domain-Containing Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug; NB-Dependent Siderophore Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MHMAAGRCRTATLHRTGLAGAWAMTLLARSALAVAAEAPQVTWLDRIEVTATPIPGTTIDAAQLPYMVQSASNAELSRGR SNNLSDLLQRRFVGVDGNDVQGSAFQNDLTFHGFRASALPGASQGVSVYLDGVRFNEPFADIVSWDMLPEAAITAMTLMP GSNPLFGPNTLGGAVVLSTASGLTAPGVQGELSIGSGARKRLDAGYGVAGADGWHGFVAVTGFDENGWRAASEGRLGTVF GKVGRQGEQTDWSLSLLHGRSRLIGNGLLPDTRYTDEGPEPGLYRADRRSVYTSPDLTRNRNTLLTVQLDHRFDADTALH ALAYSRVGRRDTVNGDIGEDYEAFVEECASGYAADGSALDAECDVARTDADTLHTGALNTTQMRQQAQGVALNLSMQRGA HALTAGVTFDRGHVRYRQFARDGWVQPDRSVAADPDAERAFFSGVRGSTETLGMFLADTWALSNATHLTAAVRWNRVVVD NILSTADDGDRPRERFVYAKAHPSLGLTHRLDSGLTLYGSVAQNSRAPTAIELGCADPTQPCRLPTGLQADPRLEQIISR TYELGASWTPSADRNATLSVYRADNRDDILFLRAPDTQLGYFDNVGRTRYQGVDAALHLRSGDWQWWAGYSYLDATYRSG GQLLSGERVIALRPGLRIAALPRHNLKLGMAWQRDALTLGVGVRAVSGRVASGNEDGQVDNAEEGQTAPERLDIGSAGYA LVDLQARWTINARVSLFARIDNVFDRHYATYAAVAEDVFPDGELARPQDAPVETGPARFLAPGVPRQYLIGLRWAL
Sequences:
>Translated_796_residues MHMAAGRCRTATLHRTGLAGAWAMTLLARSALAVAAEAPQVTWLDRIEVTATPIPGTTIDAAQLPYMVQSASNAELSRGR SNNLSDLLQRRFVGVDGNDVQGSAFQNDLTFHGFRASALPGASQGVSVYLDGVRFNEPFADIVSWDMLPEAAITAMTLMP GSNPLFGPNTLGGAVVLSTASGLTAPGVQGELSIGSGARKRLDAGYGVAGADGWHGFVAVTGFDENGWRAASEGRLGTVF GKVGRQGEQTDWSLSLLHGRSRLIGNGLLPDTRYTDEGPEPGLYRADRRSVYTSPDLTRNRNTLLTVQLDHRFDADTALH ALAYSRVGRRDTVNGDIGEDYEAFVEECASGYAADGSALDAECDVARTDADTLHTGALNTTQMRQQAQGVALNLSMQRGA HALTAGVTFDRGHVRYRQFARDGWVQPDRSVAADPDAERAFFSGVRGSTETLGMFLADTWALSNATHLTAAVRWNRVVVD NILSTADDGDRPRERFVYAKAHPSLGLTHRLDSGLTLYGSVAQNSRAPTAIELGCADPTQPCRLPTGLQADPRLEQIISR TYELGASWTPSADRNATLSVYRADNRDDILFLRAPDTQLGYFDNVGRTRYQGVDAALHLRSGDWQWWAGYSYLDATYRSG GQLLSGERVIALRPGLRIAALPRHNLKLGMAWQRDALTLGVGVRAVSGRVASGNEDGQVDNAEEGQTAPERLDIGSAGYA LVDLQARWTINARVSLFARIDNVFDRHYATYAAVAEDVFPDGELARPQDAPVETGPARFLAPGVPRQYLIGLRWAL >Mature_796_residues MHMAAGRCRTATLHRTGLAGAWAMTLLARSALAVAAEAPQVTWLDRIEVTATPIPGTTIDAAQLPYMVQSASNAELSRGR SNNLSDLLQRRFVGVDGNDVQGSAFQNDLTFHGFRASALPGASQGVSVYLDGVRFNEPFADIVSWDMLPEAAITAMTLMP GSNPLFGPNTLGGAVVLSTASGLTAPGVQGELSIGSGARKRLDAGYGVAGADGWHGFVAVTGFDENGWRAASEGRLGTVF GKVGRQGEQTDWSLSLLHGRSRLIGNGLLPDTRYTDEGPEPGLYRADRRSVYTSPDLTRNRNTLLTVQLDHRFDADTALH ALAYSRVGRRDTVNGDIGEDYEAFVEECASGYAADGSALDAECDVARTDADTLHTGALNTTQMRQQAQGVALNLSMQRGA HALTAGVTFDRGHVRYRQFARDGWVQPDRSVAADPDAERAFFSGVRGSTETLGMFLADTWALSNATHLTAAVRWNRVVVD NILSTADDGDRPRERFVYAKAHPSLGLTHRLDSGLTLYGSVAQNSRAPTAIELGCADPTQPCRLPTGLQADPRLEQIISR TYELGASWTPSADRNATLSVYRADNRDDILFLRAPDTQLGYFDNVGRTRYQGVDAALHLRSGDWQWWAGYSYLDATYRSG GQLLSGERVIALRPGLRIAALPRHNLKLGMAWQRDALTLGVGVRAVSGRVASGNEDGQVDNAEEGQTAPERLDIGSAGYA LVDLQARWTINARVSLFARIDNVFDRHYATYAAVAEDVFPDGELARPQDAPVETGPARFLAPGVPRQYLIGLRWAL
Specific function: Probable Receptor, Tonb-Dependent. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85904; Mature: 85904
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMAAGRCRTATLHRTGLAGAWAMTLLARSALAVAAEAPQVTWLDRIEVTATPIPGTTID CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCC AAQLPYMVQSASNAELSRGRSNNLSDLLQRRFVGVDGNDVQGSAFQNDLTFHGFRASALP HHHCCHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEECCCCC GASQGVSVYLDGVRFNEPFADIVSWDMLPEAAITAMTLMPGSNPLFGPNTLGGAVVLSTA CCCCCEEEEEECEECCCCHHHHHHHHCCCHHHHEEEEECCCCCCCCCCCCCCCEEEEEEC SGLTAPGVQGELSIGSGARKRLDAGYGVAGADGWHGFVAVTGFDENGWRAASEGRLGTVF CCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCEEHHH GKVGRQGEQTDWSLSLLHGRSRLIGNGLLPDTRYTDEGPEPGLYRADRRSVYTSPDLTRN HHHCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCC RNTLLTVQLDHRFDADTALHALAYSRVGRRDTVNGDIGEDYEAFVEECASGYAADGSALD CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC AECDVARTDADTLHTGALNTTQMRQQAQGVALNLSMQRGAHALTAGVTFDRGHVRYRQFA CCCCEECCCCCHHCCCCCCHHHHHHHHCCEEEEEEHHCCCEEEEECEEECCCCHHHHHHH RDGWVQPDRSVAADPDAERAFFSGVRGSTETLGMFLADTWALSNATHLTAAVRWNRVVVD HCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHH NILSTADDGDRPRERFVYAKAHPSLGLTHRLDSGLTLYGSVAQNSRAPTAIELGCADPTQ HHHHCCCCCCCCHHHEEEEECCCCCCCCEECCCCCEEEEEHHCCCCCCCEEEECCCCCCC PCRLPTGLQADPRLEQIISRTYELGASWTPSADRNATLSVYRADNRDDILFLRAPDTQLG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC YFDNVGRTRYQGVDAALHLRSGDWQWWAGYSYLDATYRSGGQLLSGERVIALRPGLRIAA CCCCCCCHHCCCCCEEEEEECCCEEEECCCCEEHHHHCCCCCEECCCEEEEECCCCEEEE LPRHNLKLGMAWQRDALTLGVGVRAVSGRVASGNEDGQVDNAEEGQTAPERLDIGSAGYA CCCCCCEEEEEECCCEEEEECCEEEECCEEECCCCCCCCCCCCCCCCCCHHCCCCCCCEE LVDLQARWTINARVSLFARIDNVFDRHYATYAAVAEDVFPDGELARPQDAPVETGPARFL EEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHC APGVPRQYLIGLRWAL CCCCCHHHHHEEEECC >Mature Secondary Structure MHMAAGRCRTATLHRTGLAGAWAMTLLARSALAVAAEAPQVTWLDRIEVTATPIPGTTID CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCC AAQLPYMVQSASNAELSRGRSNNLSDLLQRRFVGVDGNDVQGSAFQNDLTFHGFRASALP HHHCCHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEECCCCC GASQGVSVYLDGVRFNEPFADIVSWDMLPEAAITAMTLMPGSNPLFGPNTLGGAVVLSTA CCCCCEEEEEECEECCCCHHHHHHHHCCCHHHHEEEEECCCCCCCCCCCCCCCEEEEEEC SGLTAPGVQGELSIGSGARKRLDAGYGVAGADGWHGFVAVTGFDENGWRAASEGRLGTVF CCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCEEHHH GKVGRQGEQTDWSLSLLHGRSRLIGNGLLPDTRYTDEGPEPGLYRADRRSVYTSPDLTRN HHHCCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEECCCCCEECCCCCCCC RNTLLTVQLDHRFDADTALHALAYSRVGRRDTVNGDIGEDYEAFVEECASGYAADGSALD CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC AECDVARTDADTLHTGALNTTQMRQQAQGVALNLSMQRGAHALTAGVTFDRGHVRYRQFA CCCCEECCCCCHHCCCCCCHHHHHHHHCCEEEEEEHHCCCEEEEECEEECCCCHHHHHHH RDGWVQPDRSVAADPDAERAFFSGVRGSTETLGMFLADTWALSNATHLTAAVRWNRVVVD HCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHH NILSTADDGDRPRERFVYAKAHPSLGLTHRLDSGLTLYGSVAQNSRAPTAIELGCADPTQ HHHHCCCCCCCCHHHEEEEECCCCCCCCEECCCCCEEEEEHHCCCCCCCEEEECCCCCCC PCRLPTGLQADPRLEQIISRTYELGASWTPSADRNATLSVYRADNRDDILFLRAPDTQLG CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCC YFDNVGRTRYQGVDAALHLRSGDWQWWAGYSYLDATYRSGGQLLSGERVIALRPGLRIAA CCCCCCCHHCCCCCEEEEEECCCEEEECCCCEEHHHHCCCCCEECCCEEEEECCCCEEEE LPRHNLKLGMAWQRDALTLGVGVRAVSGRVASGNEDGQVDNAEEGQTAPERLDIGSAGYA CCCCCCEEEEEECCCEEEEECCEEEECCEEECCCCCCCCCCCCCCCCCCHHCCCCCCCEE LVDLQARWTINARVSLFARIDNVFDRHYATYAAVAEDVFPDGELARPQDAPVETGPARFL EEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHC APGVPRQYLIGLRWAL CCCCCHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA