| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241422
Identifier: 21241422
GI number: 21241422
Start: 768781
End: 769827
Strand: Direct
Name: 21241422
Synonym: XAC0651
Alternate gene names: NA
Gene position: 768781-769827 (Clockwise)
Preceding gene: 21241421
Following gene: 21241423
Centisome position: 14.85
GC content: 67.43
Gene sequence:
>1047_bases ATGAGCTCAGCGCCTGCTCGCTGGTCGCGCATGTGTGCAGCAGGGATGCTGGGTGCGTTGCTGCTGGCGGGCTGCCAGCG CGATGCCGTCACACCGGCCTCCACCACCGCACCTGCGGCGAGCGGCAACGCAACACCGGCGCCGGCAACGCCGCCGGTGC TTGCGTATGTGCCCAATCAACGCAGTGGCACCGTGTCGGTGATCGATACGCACACCGACACGGTGGTGCGCACGCTCAGC GCGCAGGGCCGGCTCGGCAAGCGCTTGCAGCAGCTATTGCCCGGCCCGCAAGGGCATCTGTACCTGATCGATGCCGAGCA CCACAGGTTGGTCGAACTGGATAGCGAAAGAGATGCGGTGTTGCGCAGCGTGGACATCGGCGAGAACGCCGAAGGCATCG CGTTGTCGCCGGACGGCAAGCAATTGGCGGTATGCGTGGAAGGCCAGAATCAGGTGATGCTGATCGACGCGGCGCAACTC ACCGTGCAGCAGGTGATCGCCACGCGCGGGCAGGCGCCGGAGCATTGCGCCTACACCCCGGATGGCAAGTGGTTGCTCAC CAGCAATGAAGGCTCCAACGACATGGACATGATCGAAGTGGCCACCCATCGATCGCGCGGTGTGGTGGCCACCAGCGGTC ATCCGCGCGGCATGGCGTTCGCACCCGACGGGCACAGCGCGTACGTCGCGCAGGAAACCGCCAACGTGGTGGACGTGATC GACCTGCAGACGCGTCAGCGTCGCGCCAGTCTGCCGGCCGGCGTGCGCACCGCCGGCGTCGCGCTGTCGGCCGATGGCAC GCGGCTGTATGCGTCCAACGGCGGCGCCGGCACGGTCAGCGTGATCGATCTCAATACCGCGCGCGCGCTGGCCGAGATTC CGGTTGGGCAGCGCCCGTGGAATCCGGCGCTGACGCCTGCCGGCGACAAGCTCTACGTCGCCAACGGGCGCTCCAACAGC GTGAGCGTGATCGACACCGCCAGCTTGCGCGAACTCAAACAGATCCCCGTGGGCGAGCTGCCGTGGGGCGTGATCATCGC GCGCTGA
Upstream 100 bases:
>100_bases TGGGGCAGATGCCGCCGTTCGCACCGGTACTCAAGCCCGGCGATACCGAAAAGTTGCTCGCCTTCATCCACTCGATCAAC AAGGCCGCGGGCAAGGCGCA
Downstream 100 bases:
>100_bases GCGGCCGGCAGGCCGACGGCGTCAGGGAGGCCGGATGAAGACACGCGCTGCGGTGGCCTGGGGTCCGCACCAGCCGTTGA CCATCGAAGAAGTAGACCTG
Product: surface antigen gene
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; YVTN Family Beta-Propeller Repeat Protein; Cell Surface Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Vegetative Incompatibility; Surface Antigen; Yvtn Beta-Propeller Repeat Family Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; WD-40 Repeat-Containing Protein; IPT/TIG Domain Protein; Serine/Threonine Protein Kinase; Beta-Propeller Repeat-Containing Protein; Transmembrane Protein; Signal Peptide Protein; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; Beta-Propeller Fold Protein; Signal Peptide; SGL Domain-Containing Protein; LOW QUALITY PROTEIN Surface Antigen Protein; Surface Antigen-Like Protein; Secreted Protein; Alkaline Serine Protease; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSSAPARWSRMCAAGMLGALLLAGCQRDAVTPASTTAPAASGNATPAPATPPVLAYVPNQRSGTVSVIDTHTDTVVRTLS AQGRLGKRLQQLLPGPQGHLYLIDAEHHRLVELDSERDAVLRSVDIGENAEGIALSPDGKQLAVCVEGQNQVMLIDAAQL TVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSNDMDMIEVATHRSRGVVATSGHPRGMAFAPDGHSAYVAQETANVVDVI DLQTRQRRASLPAGVRTAGVALSADGTRLYASNGGAGTVSVIDLNTARALAEIPVGQRPWNPALTPAGDKLYVANGRSNS VSVIDTASLRELKQIPVGELPWGVIIAR
Sequences:
>Translated_348_residues MSSAPARWSRMCAAGMLGALLLAGCQRDAVTPASTTAPAASGNATPAPATPPVLAYVPNQRSGTVSVIDTHTDTVVRTLS AQGRLGKRLQQLLPGPQGHLYLIDAEHHRLVELDSERDAVLRSVDIGENAEGIALSPDGKQLAVCVEGQNQVMLIDAAQL TVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSNDMDMIEVATHRSRGVVATSGHPRGMAFAPDGHSAYVAQETANVVDVI DLQTRQRRASLPAGVRTAGVALSADGTRLYASNGGAGTVSVIDLNTARALAEIPVGQRPWNPALTPAGDKLYVANGRSNS VSVIDTASLRELKQIPVGELPWGVIIAR >Mature_347_residues SSAPARWSRMCAAGMLGALLLAGCQRDAVTPASTTAPAASGNATPAPATPPVLAYVPNQRSGTVSVIDTHTDTVVRTLSA QGRLGKRLQQLLPGPQGHLYLIDAEHHRLVELDSERDAVLRSVDIGENAEGIALSPDGKQLAVCVEGQNQVMLIDAAQLT VQQVIATRGQAPEHCAYTPDGKWLLTSNEGSNDMDMIEVATHRSRGVVATSGHPRGMAFAPDGHSAYVAQETANVVDVID LQTRQRRASLPAGVRTAGVALSADGTRLYASNGGAGTVSVIDLNTARALAEIPVGQRPWNPALTPAGDKLYVANGRSNSV SVIDTASLRELKQIPVGELPWGVIIAR
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36459; Mature: 36327
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPARWSRMCAAGMLGALLLAGCQRDAVTPASTTAPAASGNATPAPATPPVLAYVPNQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC RSGTVSVIDTHTDTVVRTLSAQGRLGKRLQQLLPGPQGHLYLIDAEHHRLVELDSERDAV CCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHH LRSVDIGENAEGIALSPDGKQLAVCVEGQNQVMLIDAAQLTVQQVIATRGQAPEHCAYTP EEEECCCCCCCCEEECCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCEECC DGKWLLTSNEGSNDMDMIEVATHRSRGVVATSGHPRGMAFAPDGHSAYVAQETANVVDVI CCCEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCCEEECCCCCCEEEECCCCCEEEEE DLQTRQRRASLPAGVRTAGVALSADGTRLYASNGGAGTVSVIDLNTARALAEIPVGQRPW ECHHHHHHHCCCCCCEECCEEEECCCCEEEECCCCCEEEEEEECCHHHHHHHCCCCCCCC NPALTPAGDKLYVANGRSNSVSVIDTASLRELKQIPVGELPWGVIIAR CCCCCCCCCEEEEECCCCCCEEEEECHHHHHHHHCCCCCCCCEEEEEC >Mature Secondary Structure SSAPARWSRMCAAGMLGALLLAGCQRDAVTPASTTAPAASGNATPAPATPPVLAYVPNQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC RSGTVSVIDTHTDTVVRTLSAQGRLGKRLQQLLPGPQGHLYLIDAEHHRLVELDSERDAV CCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHH LRSVDIGENAEGIALSPDGKQLAVCVEGQNQVMLIDAAQLTVQQVIATRGQAPEHCAYTP EEEECCCCCCCCEEECCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCEECC DGKWLLTSNEGSNDMDMIEVATHRSRGVVATSGHPRGMAFAPDGHSAYVAQETANVVDVI CCCEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCCEEECCCCCCEEEECCCCCEEEEE DLQTRQRRASLPAGVRTAGVALSADGTRLYASNGGAGTVSVIDLNTARALAEIPVGQRPW ECHHHHHHHCCCCCCEECCEEEECCCCEEEECCCCCEEEEEEECCHHHHHHHCCCCCCCC NPALTPAGDKLYVANGRSNSVSVIDTASLRELKQIPVGELPWGVIIAR CCCCCCCCCEEEEECCCCCCEEEEECHHHHHHHHCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA