| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241421
Identifier: 21241421
GI number: 21241421
Start: 768029
End: 768784
Strand: Direct
Name: 21241421
Synonym: XAC0650
Alternate gene names: NA
Gene position: 768029-768784 (Clockwise)
Preceding gene: 21241420
Following gene: 21241422
Centisome position: 14.84
GC content: 68.39
Gene sequence:
>756_bases GTGGCGACACCCCACTGGCCACGCTGCTCACCAAGGCCAGGCGCCCAGCGCGCGAATGACTGCGTCACCCGCCGCGTGCA CGGGGTGCGCGGTGTTCCCTCCGATCAGAAAGGTTCGTTCATGCGCACGTCCACCAAGGGTTGTTTCGATCGTCTTGTCC GCGCACCGCTGTGCGCGTTGATGTTCAGCGTCGTGCTGGCGGCATGCGGCAAGGAGGCACCGCCGGCACCGGCCGCCGAT GCACCGCCCCCGCCACCGGCGGCCGCCAGCGCACCGGCGCCTGCGCCAGCCGCCGGCAGCGCAGCGCCTGCGGCCGCAAC TGCAGCTGCACCCGCAGCACTGCCCAACCCCGCAGCGGGGCCAGCCCCGGATCCGGCAACGCCGGCCGCGCCACCTGCCA CGATCGTGCCGATTCCCAAGGGACCCGAGGTCAAGGTCACGCCCGAGCTGGTCGCCGAAGGCAAGAAGATCTATTTTTCG GCCGGCTGCAATGCCTGTCACGGCGGTACCGGTGGCGGTGGCATGTGCCCGCCGTTGACCAACGACATCTGGGTGTATGG CAGCGACGACGACACCTTGCGCACGCTGATCAGCGAAGGCACCGCGGCCATGATCACCCACGGCAAGACCCGTATCGGGC ACGAAAAGGTGGTGGGGCAGATGCCGCCGTTCGCACCGGTACTCAAGCCCGGCGATACCGAAAAGTTGCTCGCCTTCATC CACTCGATCAACAAGGCCGCGGGCAAGGCGCAATGA
Upstream 100 bases:
>100_bases GCCGGACGCGAGGCGGTCGCCAAACGGTTGCTGGTTGCGGGCGCCGACCCGTCTGTACGTAACCGCGACGGCAAGACCGC CGCAGATCTGGCGCAGGCAC
Downstream 100 bases:
>100_bases GCTCAGCGCCTGCTCGCTGGTCGCGCATGTGTGCAGCAGGGATGCTGGGTGCGTTGCTGCTGGCGGGCTGCCAGCGCGAT GCCGTCACACCGGCCTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MATPHWPRCSPRPGAQRANDCVTRRVHGVRGVPSDQKGSFMRTSTKGCFDRLVRAPLCALMFSVVLAACGKEAPPAPAAD APPPPPAAASAPAPAPAAGSAAPAAATAAAPAALPNPAAGPAPDPATPAAPPATIVPIPKGPEVKVTPELVAEGKKIYFS AGCNACHGGTGGGGMCPPLTNDIWVYGSDDDTLRTLISEGTAAMITHGKTRIGHEKVVGQMPPFAPVLKPGDTEKLLAFI HSINKAAGKAQ
Sequences:
>Translated_251_residues MATPHWPRCSPRPGAQRANDCVTRRVHGVRGVPSDQKGSFMRTSTKGCFDRLVRAPLCALMFSVVLAACGKEAPPAPAAD APPPPPAAASAPAPAPAAGSAAPAAATAAAPAALPNPAAGPAPDPATPAAPPATIVPIPKGPEVKVTPELVAEGKKIYFS AGCNACHGGTGGGGMCPPLTNDIWVYGSDDDTLRTLISEGTAAMITHGKTRIGHEKVVGQMPPFAPVLKPGDTEKLLAFI HSINKAAGKAQ >Mature_250_residues ATPHWPRCSPRPGAQRANDCVTRRVHGVRGVPSDQKGSFMRTSTKGCFDRLVRAPLCALMFSVVLAACGKEAPPAPAADA PPPPPAAASAPAPAPAAGSAAPAAATAAAPAALPNPAAGPAPDPATPAAPPATIVPIPKGPEVKVTPELVAEGKKIYFSA GCNACHGGTGGGGMCPPLTNDIWVYGSDDDTLRTLISEGTAAMITHGKTRIGHEKVVGQMPPFAPVLKPGDTEKLLAFIH SINKAAGKAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25299; Mature: 25168
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPHWPRCSPRPGAQRANDCVTRRVHGVRGVPSDQKGSFMRTSTKGCFDRLVRAPLCAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH MFSVVLAACGKEAPPAPAADAPPPPPAAASAPAPAPAAGSAAPAAATAAAPAALPNPAAG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC PAPDPATPAAPPATIVPIPKGPEVKVTPELVAEGKKIYFSAGCNACHGGTGGGGMCPPLT CCCCCCCCCCCCCEEEECCCCCCEEECHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC NDIWVYGSDDDTLRTLISEGTAAMITHGKTRIGHEKVVGQMPPFAPVLKPGDTEKLLAFI CCEEEEECCCHHHHHHHHCCCEEEEECCCHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHH HSINKAAGKAQ HHHHHHHCCCC >Mature Secondary Structure ATPHWPRCSPRPGAQRANDCVTRRVHGVRGVPSDQKGSFMRTSTKGCFDRLVRAPLCAL CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH MFSVVLAACGKEAPPAPAADAPPPPPAAASAPAPAPAAGSAAPAAATAAAPAALPNPAAG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC PAPDPATPAAPPATIVPIPKGPEVKVTPELVAEGKKIYFSAGCNACHGGTGGGGMCPPLT CCCCCCCCCCCCCEEEECCCCCCEEECHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCC NDIWVYGSDDDTLRTLISEGTAAMITHGKTRIGHEKVVGQMPPFAPVLKPGDTEKLLAFI CCEEEEECCCHHHHHHHHCCCEEEEECCCHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHH HSINKAAGKAQ HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA