| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mxaF [H]
Identifier: 21241419
GI number: 21241419
Start: 764330
End: 766315
Strand: Direct
Name: mxaF [H]
Synonym: XAC0648
Alternate gene names: 21241419
Gene position: 764330-766315 (Clockwise)
Preceding gene: 21241418
Following gene: 21241420
Centisome position: 14.77
GC content: 64.2
Gene sequence:
>1986_bases ATGCTTGCGCTGAGCGCCGTTCTGTCTGGCTGCAAGAAAGACACACCCACCGAAACTGCGGCGCCGGCAACGGCTGCAAC ACCTGCCGCTGCGCCCGCCGCTGCACCCGCCGCCGCGGCCGTGGTCGACACCGATAGCGAGTTCACCGCCAATGCCAGCA ATGCGGACAACTGGGGTGGCGTGGGGCGCGACTTCGCACTCACCCGGCATAGCCCGCTGGCCGAGATCAATCGCGACAAC GTCAAGAATCTGAAGATGTCGTGGGAGATGAAAACCGACGCCACGCGCGGCCACGAAGGCCAGCCGCTGGTGATCGGCAG CATCATGTACATGGTCAGCGCGTATCCGAACAACGTGTTCGCCATCGATCTTGCGGCGCAGGACGACGGCGGCAAGGTGT TGTGGAAATACACCCCGCAACAGGACGAACGGTCGGTGGCGGTGGCGTGCTGCGACACGGTCAATCGCGGCGCCTCGTAT GCCGACGGCAAGCTGGTCTTCGGCAGCCTCAGCGGCGATGTGATCGCGCTCGATGCCAAGACCGGCAAGGAAGTGTGGAA GCAAAAACTTGCGCACCCGGACAAGGGCGAAACCATCACCATGGCGCCGATCATCGCCGACGGCAAGGTGGTTGCCGGCA TCAGCGGCAACGAGTTCGGCGTGCTCGGTCGCGTGGCCGCCTACAACCTTGACGATGGCAAGCAGGCATGGTCCTGCGAT GCGGCCGGTACCGACAAGGCGATCTGCCTGGGCCCGGATTTCAACAAGGCCAATCCGCAGCATGGCCAGCTCGGCGACCT GGGCGTCAAGACCTTTCCCAACGACGAATGGAAGCGCGGAGGCGGTGCAGCCTGGGGCTGGTACAGCTACGACCCGAAGT TGAAGCTGGTGTACTACGGCACCGGCAATCCCGGCCTGTGGAGCCCGTCGTACCGTTGCGGCAAGACCTCGCAGGAGGAA TGCAACAACGGCGAGCATGACAACAAGTGGTCGATGACCTTGTTCGCGCGCAAGATCGATACCGGCGAGGCGGTGTGGGG CTACCAGAAGACCCCGTTCGACCAGTGGGATTACGACGGCATCAACGAGCCGATCCTGGTCGACCTGAGCATCGATGGCA AGCAGGTTCCGTCGGTGGTGCAGTTCGACCGCAACGGGTTTGCCTACGTGCTCGATCGGCGCGATGGCACGCTGCTGCGC GCGCACAAGTTCGTGCCGGCCAACTGGGCCGAACGCATCGACATGAAGACCGGTCGCCCGGTGAAGGTGGCCGCGCATTC GCCGCTGGAACGCGGCAAGAAGGTGCAGGCGTTCCCGTCGGCGATGGGCGGCAAGGACCAGCAGCCGTGCTCGGTGGATC CGGCCAATGCGGCGGTGTTCTTCTGCGGCACCAATAACTGGCACATGGAGCTGGAACCGCAGGAGCGCGGCAACACCATG ATGGGTCTGCCGTACGTGTTCGCCAACGTGATGATGAAGCCGAATGAGCCGGGCGCGCTGGGCATCGTCAAGGCGTTCGA TGTGGTGGAAGGCAAGTCCAAGTGGGAGATCAAGGAGAAGTATCCGGTGTGGAGCGGCACCCTGGTCACCGACGGCGGGC TGGTGTTCTACGGCACGCTGGATGGGTGGTTCCGCGCGGTGGACAAGGACACCGGCAAGAAGTTGTGGGAGACCAAGTTG CCGTCCGGCATCATCGGTAACCCCATCGCCTACAAGGCCAACGGCCATCAGTACGTGGCGGTGTTCTCCGGTATCGGCGG GTGGATCGGCTTGCCGGTCACTGCAGGCCTGGATCCGTCCGATCCGTATGGCGCACTGGGTGCGGCGGGGCTGGCGTTCG GTGCGGGCTTCGACAAGATCCCGCTCGGCGGCATGGTCCACAGCTTCCGTATCGATGGCGCCGGCAAGACCGTGACTGCC ACTGCCACTGCCACTGCCACCGCAGGCGGCGGCACCGCCAATGCAGCAGCGAAGACGGCACGATGA
Upstream 100 bases:
>100_bases TGCGCTGCGGGATGTTTCAACCGACTGGTTGTTCAAACGAGAGGGGTAGACGCACATGCACCAATCTTCCTGTCGCAGCG TACGCAGCGCCGCGCTGCTC
Downstream 100 bases:
>100_bases CCTGCACGCAAGGCGTTGGGCGCGCACCTCGGCAGCTTGCTGCCGGGGTGCGCGGCATCACCCGGCACCTGCAGCAGGTG CTGGTGCTGTGCAGCCTCGG
Product: methanol dehydrogenase heavy chain
Products: D-gluconolactone; reduced acceptor [C]
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MLALSAVLSGCKKDTPTETAAPATAATPAAAPAAAPAAAAVVDTDSEFTANASNADNWGGVGRDFALTRHSPLAEINRDN VKNLKMSWEMKTDATRGHEGQPLVIGSIMYMVSAYPNNVFAIDLAAQDDGGKVLWKYTPQQDERSVAVACCDTVNRGASY ADGKLVFGSLSGDVIALDAKTGKEVWKQKLAHPDKGETITMAPIIADGKVVAGISGNEFGVLGRVAAYNLDDGKQAWSCD AAGTDKAICLGPDFNKANPQHGQLGDLGVKTFPNDEWKRGGGAAWGWYSYDPKLKLVYYGTGNPGLWSPSYRCGKTSQEE CNNGEHDNKWSMTLFARKIDTGEAVWGYQKTPFDQWDYDGINEPILVDLSIDGKQVPSVVQFDRNGFAYVLDRRDGTLLR AHKFVPANWAERIDMKTGRPVKVAAHSPLERGKKVQAFPSAMGGKDQQPCSVDPANAAVFFCGTNNWHMELEPQERGNTM MGLPYVFANVMMKPNEPGALGIVKAFDVVEGKSKWEIKEKYPVWSGTLVTDGGLVFYGTLDGWFRAVDKDTGKKLWETKL PSGIIGNPIAYKANGHQYVAVFSGIGGWIGLPVTAGLDPSDPYGALGAAGLAFGAGFDKIPLGGMVHSFRIDGAGKTVTA TATATATAGGGTANAAAKTAR
Sequences:
>Translated_661_residues MLALSAVLSGCKKDTPTETAAPATAATPAAAPAAAPAAAAVVDTDSEFTANASNADNWGGVGRDFALTRHSPLAEINRDN VKNLKMSWEMKTDATRGHEGQPLVIGSIMYMVSAYPNNVFAIDLAAQDDGGKVLWKYTPQQDERSVAVACCDTVNRGASY ADGKLVFGSLSGDVIALDAKTGKEVWKQKLAHPDKGETITMAPIIADGKVVAGISGNEFGVLGRVAAYNLDDGKQAWSCD AAGTDKAICLGPDFNKANPQHGQLGDLGVKTFPNDEWKRGGGAAWGWYSYDPKLKLVYYGTGNPGLWSPSYRCGKTSQEE CNNGEHDNKWSMTLFARKIDTGEAVWGYQKTPFDQWDYDGINEPILVDLSIDGKQVPSVVQFDRNGFAYVLDRRDGTLLR AHKFVPANWAERIDMKTGRPVKVAAHSPLERGKKVQAFPSAMGGKDQQPCSVDPANAAVFFCGTNNWHMELEPQERGNTM MGLPYVFANVMMKPNEPGALGIVKAFDVVEGKSKWEIKEKYPVWSGTLVTDGGLVFYGTLDGWFRAVDKDTGKKLWETKL PSGIIGNPIAYKANGHQYVAVFSGIGGWIGLPVTAGLDPSDPYGALGAAGLAFGAGFDKIPLGGMVHSFRIDGAGKTVTA TATATATAGGGTANAAAKTAR >Mature_661_residues MLALSAVLSGCKKDTPTETAAPATAATPAAAPAAAPAAAAVVDTDSEFTANASNADNWGGVGRDFALTRHSPLAEINRDN VKNLKMSWEMKTDATRGHEGQPLVIGSIMYMVSAYPNNVFAIDLAAQDDGGKVLWKYTPQQDERSVAVACCDTVNRGASY ADGKLVFGSLSGDVIALDAKTGKEVWKQKLAHPDKGETITMAPIIADGKVVAGISGNEFGVLGRVAAYNLDDGKQAWSCD AAGTDKAICLGPDFNKANPQHGQLGDLGVKTFPNDEWKRGGGAAWGWYSYDPKLKLVYYGTGNPGLWSPSYRCGKTSQEE CNNGEHDNKWSMTLFARKIDTGEAVWGYQKTPFDQWDYDGINEPILVDLSIDGKQVPSVVQFDRNGFAYVLDRRDGTLLR AHKFVPANWAERIDMKTGRPVKVAAHSPLERGKKVQAFPSAMGGKDQQPCSVDPANAAVFFCGTNNWHMELEPQERGNTM MGLPYVFANVMMKPNEPGALGIVKAFDVVEGKSKWEIKEKYPVWSGTLVTDGGLVFYGTLDGWFRAVDKDTGKKLWETKL PSGIIGNPIAYKANGHQYVAVFSGIGGWIGLPVTAGLDPSDPYGALGAAGLAFGAGFDKIPLGGMVHSFRIDGAGKTVTA TATATATAGGGTANAAAKTAR
Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=663, Percent_Identity=24.8868778280543, Blast_Score=139, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: 1.1.5.2 [C]
Molecular weight: Translated: 70409; Mature: 70409
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALSAVLSGCKKDTPTETAAPATAATPAAAPAAAPAAAAVVDTDSEFTANASNADNWGG CEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCC VGRDFALTRHSPLAEINRDNVKNLKMSWEMKTDATRGHEGQPLVIGSIMYMVSAYPNNVF CCCCEEEECCCCHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCEE AIDLAAQDDGGKVLWKYTPQQDERSVAVACCDTVNRGASYADGKLVFGSLSGDVIALDAK EEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCCCCCEEEEEECCCCEEEEECC TGKEVWKQKLAHPDKGETITMAPIIADGKVVAGISGNEFGVLGRVAAYNLDDGKQAWSCD CCHHHHHHHCCCCCCCCEEEEEEEEECCCEEEECCCCCCCEEEEEEEECCCCCCCEEECC AAGTDKAICLGPDFNKANPQHGQLGDLGVKTFPNDEWKRGGGAAWGWYSYDPKLKLVYYG CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCEEEEEEEE TGNPGLWSPSYRCGKTSQEECNNGEHDNKWSMTLFARKIDTGEAVWGYQKTPFDQWDYDG CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCCCCC INEPILVDLSIDGKQVPSVVQFDRNGFAYVLDRRDGTLLRAHKFVPANWAERIDMKTGRP CCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCHHHHHCCCCCCC VKVAAHSPLERGKKVQAFPSAMGGKDQQPCSVDPANAAVFFCGTNNWHMELEPQERGNTM EEEEECCCHHHCCEEEECHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECHHHHCCEE MGLPYVFANVMMKPNEPGALGIVKAFDVVEGKSKWEIKEKYPVWSGTLVTDGGLVFYGTL EECHHHHHHHEECCCCCCCEEEEEEEHHHCCCCCEEEEECCCCCCCEEEECCCEEEEECC DGWFRAVDKDTGKKLWETKLPSGIIGNPIAYKANGHQYVAVFSGIGGWIGLPVTAGLDPS CHHHHHHCCHHCHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCEECCCCCC DPYGALGAAGLAFGAGFDKIPLGGMVHSFRIDGAGKTVTATATATATAGGGTANAAAKTA CCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHCCC R C >Mature Secondary Structure MLALSAVLSGCKKDTPTETAAPATAATPAAAPAAAPAAAAVVDTDSEFTANASNADNWGG CEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCC VGRDFALTRHSPLAEINRDNVKNLKMSWEMKTDATRGHEGQPLVIGSIMYMVSAYPNNVF CCCCEEEECCCCHHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCEE AIDLAAQDDGGKVLWKYTPQQDERSVAVACCDTVNRGASYADGKLVFGSLSGDVIALDAK EEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHCCCCCCCCCEEEEEECCCCEEEEECC TGKEVWKQKLAHPDKGETITMAPIIADGKVVAGISGNEFGVLGRVAAYNLDDGKQAWSCD CCHHHHHHHCCCCCCCCEEEEEEEEECCCEEEECCCCCCCEEEEEEEECCCCCCCEEECC AAGTDKAICLGPDFNKANPQHGQLGDLGVKTFPNDEWKRGGGAAWGWYSYDPKLKLVYYG CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCEEEEEEEE TGNPGLWSPSYRCGKTSQEECNNGEHDNKWSMTLFARKIDTGEAVWGYQKTPFDQWDYDG CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEEEECCCCCEEECCCCCCCCCCCCCC INEPILVDLSIDGKQVPSVVQFDRNGFAYVLDRRDGTLLRAHKFVPANWAERIDMKTGRP CCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCHHHHHCCCCCCC VKVAAHSPLERGKKVQAFPSAMGGKDQQPCSVDPANAAVFFCGTNNWHMELEPQERGNTM EEEEECCCHHHCCEEEECHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEECHHHHCCEE MGLPYVFANVMMKPNEPGALGIVKAFDVVEGKSKWEIKEKYPVWSGTLVTDGGLVFYGTL EECHHHHHHHEECCCCCCCEEEEEEEHHHCCCCCEEEEECCCCCCCEEEECCCEEEEECC DGWFRAVDKDTGKKLWETKLPSGIIGNPIAYKANGHQYVAVFSGIGGWIGLPVTAGLDPS CHHHHHHCCHHCHHHHHHCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCEECCCCCC DPYGALGAAGLAFGAGFDKIPLGGMVHSFRIDGAGKTVTATATATATAGGGTANAAAKTA CCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Pqq. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-Glucose; acceptor [C]
Specific reaction: D-Glucose + acceptor = D-gluconolactone + reduced acceptor [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1657873 [H]