| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gph [C]
Identifier: 21241418
GI number: 21241418
Start: 763162
End: 763749
Strand: Direct
Name: gph [C]
Synonym: XAC0647
Alternate gene names: 21241418
Gene position: 763162-763749 (Clockwise)
Preceding gene: 21241417
Following gene: 21241419
Centisome position: 14.75
GC content: 67.52
Gene sequence:
>588_bases TTGTCCGACTATCGCCATTGGGTCTTCGATATGGACGGCACGCTGACCGAAGCTGCGCACGATTTCGCCTTGATCCGCCG CGTCCTGGACATTCCGCCAACGGCGGACATCCTGCATCACCTGGCAGCGTTACCGGCCGACGAAGCGGCGGCCAAGCATG CCTGGTTGCTCGAACACGAGCGTGCGCTCGCCCAAGGCGCACGCGCCGCGCCGGGCGCAGTGGCGCTGGTGCGCGCGCTG CATGCCGCCGGTTGCCGGCTTGGCATGCTCACCCGCAACGCGCGCGAGCTGGCAAAGATCACGTTGCAGGCGATCGGTCT GGACGATGCATTCGCCTGGGACGACATCGTTGGCCGCGACGAGGCTGCCCCAAAACCTGCGCCCGACGGGCTGCATTATT TCGCGCGGCGCTGGTCGGTGCAGGGCAGCGCGCTGGTCATGGTCGGCGATCACCACAATGACCTGGCCTGCGGCCGCGCC GTCGGTGCCTGCACTGTCCTGGTCAATACACCCGGCGACCCCTGGCCCGGTTTCGCCGACTGGCGCCTGCACGATTGCAC GCAGTTGCTCGCGCAATGGGAGCGCTAG
Upstream 100 bases:
>100_bases CACTGCAGGTTGGCCGCGCCGCCGCCTGCCGCACCGAATCGATCACTTTGATGTCTTTGCAAGGATGGACAACATGACAA GCGCCGCTCTCTCTCCCACG
Downstream 100 bases:
>100_bases GGTGGCGCGTTGTGCCTGTGCAACGGGGGTAACGTGCACCCGAGCAGGCATGGGAACTGTTGACTAGCCGCCGACGTCAT GACGCGTCGTGGACGGCGCA
Product: hypothetical protein
Products: Glycolate; Phosphate [C]
Alternate protein names: HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Hydrolase Protein; Hydrolase; Phosphoglycolate Phosphatase PGP; Haloacid Dehalogenase Hydrolase; HAD-Superfamily Hydrolase
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSDYRHWVFDMDGTLTEAAHDFALIRRVLDIPPTADILHHLAALPADEAAAKHAWLLEHERALAQGARAAPGAVALVRAL HAAGCRLGMLTRNARELAKITLQAIGLDDAFAWDDIVGRDEAAPKPAPDGLHYFARRWSVQGSALVMVGDHHNDLACGRA VGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER
Sequences:
>Translated_195_residues MSDYRHWVFDMDGTLTEAAHDFALIRRVLDIPPTADILHHLAALPADEAAAKHAWLLEHERALAQGARAAPGAVALVRAL HAAGCRLGMLTRNARELAKITLQAIGLDDAFAWDDIVGRDEAAPKPAPDGLHYFARRWSVQGSALVMVGDHHNDLACGRA VGACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER >Mature_194_residues SDYRHWVFDMDGTLTEAAHDFALIRRVLDIPPTADILHHLAALPADEAAAKHAWLLEHERALAQGARAAPGAVALVRALH AAGCRLGMLTRNARELAKITLQAIGLDDAFAWDDIVGRDEAAPKPAPDGLHYFARRWSVQGSALVMVGDHHNDLACGRAV GACTVLVNTPGDPWPGFADWRLHDCTQLLAQWER
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324705, Length=166, Percent_Identity=29.5180722891566, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 21286; Mature: 21155
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDYRHWVFDMDGTLTEAAHDFALIRRVLDIPPTADILHHLAALPADEAAAKHAWLLEHE CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH RALAQGARAAPGAVALVRALHAAGCRLGMLTRNARELAKITLQAIGLDDAFAWDDIVGRD HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC EAAPKPAPDGLHYFARRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFAD CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCCCCCCCC WRLHDCTQLLAQWER CHHHHHHHHHHHCCC >Mature Secondary Structure SDYRHWVFDMDGTLTEAAHDFALIRRVLDIPPTADILHHLAALPADEAAAKHAWLLEHE CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH RALAQGARAAPGAVALVRALHAAGCRLGMLTRNARELAKITLQAIGLDDAFAWDDIVGRD HHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC EAAPKPAPDGLHYFARRWSVQGSALVMVGDHHNDLACGRAVGACTVLVNTPGDPWPGFAD CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCCCCCCCC WRLHDCTQLLAQWER CHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA