| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241417
Identifier: 21241417
GI number: 21241417
Start: 762063
End: 762782
Strand: Direct
Name: 21241417
Synonym: XAC0646
Alternate gene names: NA
Gene position: 762063-762782 (Clockwise)
Preceding gene: 21241416
Following gene: 21241418
Centisome position: 14.72
GC content: 65.97
Gene sequence:
>720_bases ATGAAGTATCTGCTGAGCGCGGCCTTGTGCGTCGCCGCCTTGAGTGCCTGCACCGACCGCGAGGCGCAACGTCAGGCGCA GGCCACCGCGCAGGCGCAGGCCAAGGAAACCCAGGCCGAGGCGCTCGCCAAGCAATACGACGAAGCGGTGAAAGCGCAGA ACTGGGACATGGCGCGTGCGCATGGTGCGGCCTTGATCGAAGGTTATGCGGGCACTGCGGCCGCCACGCGCATCGAGCCA GGCTATGCCGATATCAAGGCCAAGGGCGAGCAGGCGCGCGAGCTGCGCCGCATGCAGGCGCTGTGGCAATACTCGCAGGT GCCGGCCAAGGGCGGTACGCAGCGCTCGGCGATGATCGACGCCAAGCAACGTGTGGATGTGGATGGCAGCGGACCCAAGC CGGTCAGCCTGGTGTTTCGCGATCATCCGCAGTGGAAGCGCCACAGCTACCTCGTGCTCAAGGCCGGCGATTTCAACTGC TACGGTGGCTGCAAGGTGCAGGTGACGGCCGATGGCGGCGCACCGCGTGCCCTGGCGGCGCACCGCCCGGATACCGACGA AGCCATTGCCATGTTCATCGACGATGACAAAGCGTTGTGGAAGCTCGTACGCAACGCCAAGCGCATCGGCATTACCTTCC CGGTCAAGGCCGGCGGTACGCGCACCGCAGAGTTCGAGGTCGGCGGCCTGGACACCACGCAGATGCCCGGGTGGAAGTAG
Upstream 100 bases:
>100_bases CTCCATCGCGCCCGGGTGCGCTCCTACGGTCTACGGGTTTGATCACGGGTACGGCGGGCAGGCTGGTATCGTTGACGTTG AATTCGCCCCGGAGTCGACG
Downstream 100 bases:
>100_bases GCGAGTCCGCGATGAGTGCTGGCGTACACCGATCTGTTTGCGAGTTGGTGCAGCATTGCCGCGCTTGATCGATAGTGCAG TACCCGGTGTGATGGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKYLLSAALCVAALSACTDREAQRQAQATAQAQAKETQAEALAKQYDEAVKAQNWDMARAHGAALIEGYAGTAAATRIEP GYADIKAKGEQARELRRMQALWQYSQVPAKGGTQRSAMIDAKQRVDVDGSGPKPVSLVFRDHPQWKRHSYLVLKAGDFNC YGGCKVQVTADGGAPRALAAHRPDTDEAIAMFIDDDKALWKLVRNAKRIGITFPVKAGGTRTAEFEVGGLDTTQMPGWK
Sequences:
>Translated_239_residues MKYLLSAALCVAALSACTDREAQRQAQATAQAQAKETQAEALAKQYDEAVKAQNWDMARAHGAALIEGYAGTAAATRIEP GYADIKAKGEQARELRRMQALWQYSQVPAKGGTQRSAMIDAKQRVDVDGSGPKPVSLVFRDHPQWKRHSYLVLKAGDFNC YGGCKVQVTADGGAPRALAAHRPDTDEAIAMFIDDDKALWKLVRNAKRIGITFPVKAGGTRTAEFEVGGLDTTQMPGWK >Mature_239_residues MKYLLSAALCVAALSACTDREAQRQAQATAQAQAKETQAEALAKQYDEAVKAQNWDMARAHGAALIEGYAGTAAATRIEP GYADIKAKGEQARELRRMQALWQYSQVPAKGGTQRSAMIDAKQRVDVDGSGPKPVSLVFRDHPQWKRHSYLVLKAGDFNC YGGCKVQVTADGGAPRALAAHRPDTDEAIAMFIDDDKALWKLVRNAKRIGITFPVKAGGTRTAEFEVGGLDTTQMPGWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25923; Mature: 25923
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLLSAALCVAALSACTDREAQRQAQATAQAQAKETQAEALAKQYDEAVKAQNWDMARA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HGAALIEGYAGTAAATRIEPGYADIKAKGEQARELRRMQALWQYSQVPAKGGTQRSAMID CCCCEEECCCCCCHHEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AKQRVDVDGSGPKPVSLVFRDHPQWKRHSYLVLKAGDFNCYGGCKVQVTADGGAPRALAA HHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEC HRPDTDEAIAMFIDDDKALWKLVRNAKRIGITFPVKAGGTRTAEFEVGGLDTTQMPGWK CCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKYLLSAALCVAALSACTDREAQRQAQATAQAQAKETQAEALAKQYDEAVKAQNWDMARA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HGAALIEGYAGTAAATRIEPGYADIKAKGEQARELRRMQALWQYSQVPAKGGTQRSAMID CCCCEEECCCCCCHHEECCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AKQRVDVDGSGPKPVSLVFRDHPQWKRHSYLVLKAGDFNCYGGCKVQVTADGGAPRALAA HHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEC HRPDTDEAIAMFIDDDKALWKLVRNAKRIGITFPVKAGGTRTAEFEVGGLDTTQMPGWK CCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA