| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ybaN [H]
Identifier: 21241403
GI number: 21241403
Start: 748339
End: 748737
Strand: Direct
Name: ybaN [H]
Synonym: XAC0632
Alternate gene names: 21241403
Gene position: 748339-748737 (Clockwise)
Preceding gene: 21241402
Following gene: 21241404
Centisome position: 14.46
GC content: 67.67
Gene sequence:
>399_bases ATGACGCGACCGACTCGATTCCGCTGGGCCTGGTGGTTGCTGGCCTACGCCAGCCTGGCCACCGGCATTGTCGGGATCTT CGTCCCGGGGCTGCCGACGACGGTCTTCATCCTGATCTCTGCCTGGGCGGCTTCGCACGGCTCCGAACGCCTGCATAACT GGCTGCTGTCGCATCCGCGCTTCGGCCCGGCGATCGTGGAATGGCAGACCTACCGTGCGGTCAGCCGCAAGGCCAAGTGG ATGGCGACGCTGACCATGACGGTCTGCGCCGCGATCATGCTGTGGTGCGTGCCGGTGTTCTGGGTCAAGTGCCTGTCGAT CGGCAGCATGGCCGTGGTAGCGATCTGGCTGTGGTTGCGCCCCGAGCCGCCGCCGCGCCCTCTGCCCGGCGCGCACTGA
Upstream 100 bases:
>100_bases TGCACGCCGCCCGCTGCGGACAGCGCGCCCTCCTGCGGCGACACAATCACCGCTGCAGGGCCGACTCACCAAACCGCAGC GCTGGCCGTATCATTTGCGC
Downstream 100 bases:
>100_bases ACGCAGCGGGCCATTGAGCGCACGGCCATAACGGTGTTCTGGCTATACTTCGGCCCATGAGCATTATGTCCCGACCGTCT GTTCGTCTCGCACTGGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTRPTRFRWAWWLLAYASLATGIVGIFVPGLPTTVFILISAWAASHGSERLHNWLLSHPRFGPAIVEWQTYRAVSRKAKW MATLTMTVCAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLRPEPPPRPLPGAH
Sequences:
>Translated_132_residues MTRPTRFRWAWWLLAYASLATGIVGIFVPGLPTTVFILISAWAASHGSERLHNWLLSHPRFGPAIVEWQTYRAVSRKAKW MATLTMTVCAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLRPEPPPRPLPGAH >Mature_131_residues TRPTRFRWAWWLLAYASLATGIVGIFVPGLPTTVFILISAWAASHGSERLHNWLLSHPRFGPAIVEWQTYRAVSRKAKWM ATLTMTVCAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLRPEPPPRPLPGAH
Specific function: Unknown
COG id: COG2832
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786674, Length=109, Percent_Identity=33.9449541284404, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007401 [H]
Pfam domain/function: PF04304 DUF454 [H]
EC number: NA
Molecular weight: Translated: 14951; Mature: 14820
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPTRFRWAWWLLAYASLATGIVGIFVPGLPTTVFILISAWAASHGSERLHNWLLSHPR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC FGPAIVEWQTYRAVSRKAKWMATLTMTVCAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PEPPPRPLPGAH CCCCCCCCCCCC >Mature Secondary Structure TRPTRFRWAWWLLAYASLATGIVGIFVPGLPTTVFILISAWAASHGSERLHNWLLSHPR CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCC FGPAIVEWQTYRAVSRKAKWMATLTMTVCAAIMLWCVPVFWVKCLSIGSMAVVAIWLWLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC PEPPPRPLPGAH CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]