| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is icfG [H]
Identifier: 21241343
GI number: 21241343
Start: 671960
End: 674041
Strand: Reverse
Name: icfG [H]
Synonym: XAC0572
Alternate gene names: 21241343
Gene position: 674041-671960 (Counterclockwise)
Preceding gene: 21241349
Following gene: 21241342
Centisome position: 13.02
GC content: 68.11
Gene sequence:
>2082_bases GTGCATGGCAGCAAAGCTGCCATGATCCAGCGCAGCTGCTGCCACGAAGAGTGCGCCATGCGCAATCGCCCGCGATCACT GCCACCCCGGACATCGGTCGCCGCGCGCATGCCGTGGCGTCGCAGCTTGCGCATGCGTGTGCTGCTGGCGGCCACCGCGG TGCTGGTGGCCTTGCTGACGGTGCTGGGCACGGTGTTCTACCTGGGCGCGCGCGCCGAGCTGGTGGACGCGGCGCGCACC GAGGTGGATGGCCTGACCGAACAGACTGCGCGCAGCCTGGCGGCGATGCTGGATTCGGTGCAGGTGAGCGGGCGCACGTT GGCGGCCAGCAGCGGCGGGGTCGGCCTGCAGCCGTTCAATTTGCGTGCATTGCTGCTGGCCACGCTCACCGGCGATCCGG ATATCGGTGCAGCGCGCCTGATCATCGAGCGGCGCACGCAAAAGGCCGGCGACAGCGGGTTTGTCTGGTACGTGCATCGC AACGGCACACGCGTGGCGGAAAAATCCGCGCTGGAACTGGGGTACGACTATCGCGCGATGCCCTGGTATCTGCGTACCCA GCGCGAGGGCCGGGCATGGTGGTCCGAGCCCTACATGGACGCCAATGGCGGCGGCCTGTACACCAGTTACAACCTGCCGC TGCGCCGGCCCGGCGATGCACCCGATGCGGCACCGGTGGGCATGGTCAGCGTGGATTTGCCGCTGCAGCACCTGCGCGAG ATCATCGATCAGCTGCCGCGCGATATCGGCATCCAGACGATGCTGCTGTCGCCGGAAGGCCTGCTGGTCTTCAGCCCCGA CCCGGCACTCAATCTGCGCCACTCGCTTGCGGCCTATGTGGCCCGTTCGCGCCCGGACCTGCGGCCATTGCAACGCGCCG TGGCAGCCGGCCAGCCGATTTCGTTTTCGCATACCGCGCCCGACGGCGAGCGCTTTCTGACCCATAGCGCAGCGGTGGGG CGCAGCGGCTGGACCTTCGTATTGTCGGCCTCCGAAGGCTACGTGCTGGCCGGTCTGAACTGGCTGGCGGCATGGGTGGC GCTGGCCGCGCTGCTGGGCGCCATGGTGTGGTGGTGGTTGATGCGGCGGATCACGCGCAAGTTGACGCGACCGATCGAAG AACTGACCGACACCGCCGAGCATTTTCGTCGCGGCGAATTCGAGTACCCGTTACCGCACATCGAACGCGACGACGAGGTG GGCGTGATGGCACGCGCCTTCGACAGCGCACGCGATGCGATCCGCCACCACATCGCCGAGATCGGCGAGATGACCGCCGC GCGCGAACGCATGCACAGCGAGCTGCAGATTGCGCGCGAAATCCAGCAGGCGATGCTGCCTTCCGGGCGCACCTTCGACC GCGCCAGTTCGCACCTGGAAACCTGCGCGTGGCTGGAGCCGGCCAAGGCGGTGGGCGGGGATTTCTACCACTTCGTGGAA ACCGAACCGGGCCTGCTGTGGTTCGTGGTGGGCGATGTCTCCGACAAGGGCGTGCCGGCGGCGTTGTTCATGGCGCGCGC GGTGAGCGTGCTGGAGATTGCCGCGCGGCGGTACACGCGCCCGGATGCGATTTTGATCGCCGCCTCCACGCGGTTGGCCG AAAACAACGAGACCTGCATGTTCGCCACCGTGCTGTGCGGCCTGATCAACGTGGTGAGCGGCGACTACTGGCTGGCCAGC GCCGGGCACGAGCCGCCGCTGTTGATCGATATCGACGGCACGGCACGGCCGTTGCCGCTGGAAACCGGCGCGCCGCTGGG GATCGAGCAACAGGAGTCCTATCCGGTGCTGCAGGGCCGCATGAGCGCCGGGCAGACCTTGCTGGGCTACACGGATGGCG TGACCGAGGCGATGGACGAGCGCGGCGCCAGCTACGGGATGGAGCGGTTGCTGGCGGCGCTGCACCCGCGCCGCAGCGCG GCGGCGCAGTGCAAGGCGGTGATCGCCAATATCGCCCGTTTCACCGGCACGGCCGATCCGTACGACGACATCACGCTGCT GGCGATCCGGCTGCGCCAGGAGCATGCTGGGCGGGTCGCACACGCTGGCCGGGACGCGCCCGGAAAGGCAACGACTGCAT GA
Upstream 100 bases:
>100_bases GGCGCAAGGCCGGCCTCCGTGGCAGGTGGGCGGCCAATCTAGTCCGCTCGCGTTCGGCCGGTCAATCGCGACCACGTGAG GATGAGGCTGCTAAAGAGTT
Downstream 100 bases:
>100_bases AGCTCGAGTTGGCCATCGCGCCATCGCTGGCCCAGCTGGCCGGCGCCAACGATGCGCTGGAACGGTCGCTCACGCTCGAG GGCCTGCACGCCGAGCGCAT
Product: IcfG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MHGSKAAMIQRSCCHEECAMRNRPRSLPPRTSVAARMPWRRSLRMRVLLAATAVLVALLTVLGTVFYLGARAELVDAART EVDGLTEQTARSLAAMLDSVQVSGRTLAASSGGVGLQPFNLRALLLATLTGDPDIGAARLIIERRTQKAGDSGFVWYVHR NGTRVAEKSALELGYDYRAMPWYLRTQREGRAWWSEPYMDANGGGLYTSYNLPLRRPGDAPDAAPVGMVSVDLPLQHLRE IIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLAAYVARSRPDLRPLQRAVAAGQPISFSHTAPDGERFLTHSAAVG RSGWTFVLSASEGYVLAGLNWLAAWVALAALLGAMVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPLPHIERDDEV GVMARAFDSARDAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAVGGDFYHFVE TEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCMFATVLCGLINVVSGDYWLAS AGHEPPLLIDIDGTARPLPLETGAPLGIEQQESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGMERLLAALHPRRSA AAQCKAVIANIARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA
Sequences:
>Translated_693_residues MHGSKAAMIQRSCCHEECAMRNRPRSLPPRTSVAARMPWRRSLRMRVLLAATAVLVALLTVLGTVFYLGARAELVDAART EVDGLTEQTARSLAAMLDSVQVSGRTLAASSGGVGLQPFNLRALLLATLTGDPDIGAARLIIERRTQKAGDSGFVWYVHR NGTRVAEKSALELGYDYRAMPWYLRTQREGRAWWSEPYMDANGGGLYTSYNLPLRRPGDAPDAAPVGMVSVDLPLQHLRE IIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLAAYVARSRPDLRPLQRAVAAGQPISFSHTAPDGERFLTHSAAVG RSGWTFVLSASEGYVLAGLNWLAAWVALAALLGAMVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPLPHIERDDEV GVMARAFDSARDAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAVGGDFYHFVE TEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCMFATVLCGLINVVSGDYWLAS AGHEPPLLIDIDGTARPLPLETGAPLGIEQQESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGMERLLAALHPRRSA AAQCKAVIANIARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA >Mature_693_residues MHGSKAAMIQRSCCHEECAMRNRPRSLPPRTSVAARMPWRRSLRMRVLLAATAVLVALLTVLGTVFYLGARAELVDAART EVDGLTEQTARSLAAMLDSVQVSGRTLAASSGGVGLQPFNLRALLLATLTGDPDIGAARLIIERRTQKAGDSGFVWYVHR NGTRVAEKSALELGYDYRAMPWYLRTQREGRAWWSEPYMDANGGGLYTSYNLPLRRPGDAPDAAPVGMVSVDLPLQHLRE IIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLAAYVARSRPDLRPLQRAVAAGQPISFSHTAPDGERFLTHSAAVG RSGWTFVLSASEGYVLAGLNWLAAWVALAALLGAMVWWWLMRRITRKLTRPIEELTDTAEHFRRGEFEYPLPHIERDDEV GVMARAFDSARDAIRHHIAEIGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAVGGDFYHFVE TEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCMFATVLCGLINVVSGDYWLAS AGHEPPLLIDIDGTARPLPLETGAPLGIEQQESYPVLQGRMSAGQTLLGYTDGVTEAMDERGASYGMERLLAALHPRRSA AAQCKAVIANIARFTGTADPYDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 75862; Mature: 75862
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS50885 HAMP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGSKAAMIQRSCCHEECAMRNRPRSLPPRTSVAARMPWRRSLRMRVLLAATAVLVALLT CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH VLGTVFYLGARAELVDAARTEVDGLTEQTARSLAAMLDSVQVSGRTLAASSGGVGLQPFN HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC LRALLLATLTGDPDIGAARLIIERRTQKAGDSGFVWYVHRNGTRVAEKSALELGYDYRAM HHEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCC PWYLRTQREGRAWWSEPYMDANGGGLYTSYNLPLRRPGDAPDAAPVGMVSVDLPLQHLRE CCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHH IIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLAAYVARSRPDLRPLQRAVAAGQPI HHHHCCHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SFSHTAPDGERFLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVALAALLGAMVWWWL CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHH MRRITRKLTRPIEELTDTAEHFRRGEFEYPLPHIERDDEVGVMARAFDSARDAIRHHIAE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAVGGDFYHFVE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEE TEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCM CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCH FATVLCGLINVVSGDYWLASAGHEPPLLIDIDGTARPLPLETGAPLGIEQQESYPVLQGR HHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH MSAGQTLLGYTDGVTEAMDERGASYGMERLLAALHPRRSAAAQCKAVIANIARFTGTADP HCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC YDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA CCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MHGSKAAMIQRSCCHEECAMRNRPRSLPPRTSVAARMPWRRSLRMRVLLAATAVLVALLT CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH VLGTVFYLGARAELVDAARTEVDGLTEQTARSLAAMLDSVQVSGRTLAASSGGVGLQPFN HHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC LRALLLATLTGDPDIGAARLIIERRTQKAGDSGFVWYVHRNGTRVAEKSALELGYDYRAM HHEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCC PWYLRTQREGRAWWSEPYMDANGGGLYTSYNLPLRRPGDAPDAAPVGMVSVDLPLQHLRE CCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHH IIDQLPRDIGIQTMLLSPEGLLVFSPDPALNLRHSLAAYVARSRPDLRPLQRAVAAGQPI HHHHCCHHCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC SFSHTAPDGERFLTHSAAVGRSGWTFVLSASEGYVLAGLNWLAAWVALAALLGAMVWWWL CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHH MRRITRKLTRPIEELTDTAEHFRRGEFEYPLPHIERDDEVGVMARAFDSARDAIRHHIAE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH IGEMTAARERMHSELQIAREIQQAMLPSGRTFDRASSHLETCAWLEPAKAVGGDFYHFVE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEE TEPGLLWFVVGDVSDKGVPAALFMARAVSVLEIAARRYTRPDAILIAASTRLAENNETCM CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCH FATVLCGLINVVSGDYWLASAGHEPPLLIDIDGTARPLPLETGAPLGIEQQESYPVLQGR HHHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHH MSAGQTLLGYTDGVTEAMDERGASYGMERLLAALHPRRSAAAQCKAVIANIARFTGTADP HCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC YDDITLLAIRLRQEHAGRVAHAGRDAPGKATTA CCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]