| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241342
Identifier: 21241342
GI number: 21241342
Start: 671532
End: 671963
Strand: Reverse
Name: 21241342
Synonym: XAC0571
Alternate gene names: NA
Gene position: 671963-671532 (Counterclockwise)
Preceding gene: 21241343
Following gene: 21241341
Centisome position: 12.98
GC content: 68.06
Gene sequence:
>432_bases ATGAAGCTCGAGTTGGCCATCGCGCCATCGCTGGCCCAGCTGGCCGGCGCCAACGATGCGCTGGAACGGTCGCTCACGCT CGAGGGCCTGCACGCCGAGCGCATCGGCCAGGTGCGGTTGATCGTGGAAGAGCTCGGCTGCAACGCACTGACCCACGGCC AGTGCGCCGCACAGCCGCTGCGCCTGCAGCTGCAGCTGGACGCCCAGGCGCTGGTATTGGAAATGCACGATGCGGGCAGC GCCTTCGACCCCTGCGCCGCGCCCCTGCCCGAGGTGACCGACGAGCTCGACGACCGCGCCATCGGCGGGCTGGGGTTGTT TTTGGTCCATCAGTTCGCCGATCACATCGACTACCGCCGCGATGGTGCATATAACGTCGTGCGCGTCACCCTGCTGCACC CGTACGCCCCTGTCCCCGAGGCCCTGTCATGA
Upstream 100 bases:
>100_bases CGTACGACGACATCACGCTGCTGGCGATCCGGCTGCGCCAGGAGCATGCTGGGCGGGTCGCACACGCTGGCCGGGACGCG CCCGGAAAGGCAACGACTGC
Downstream 100 bases:
>100_bases CCACGCTCGCCATTCAGATCGACCCGCCGCAGGACACCCGTCAACGCGTCATCCTGACCGGGCGCCTGGACACCCACACC TACCAGGACCTGGACGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKLELAIAPSLAQLAGANDALERSLTLEGLHAERIGQVRLIVEELGCNALTHGQCAAQPLRLQLQLDAQALVLEMHDAGS AFDPCAAPLPEVTDELDDRAIGGLGLFLVHQFADHIDYRRDGAYNVVRVTLLHPYAPVPEALS
Sequences:
>Translated_143_residues MKLELAIAPSLAQLAGANDALERSLTLEGLHAERIGQVRLIVEELGCNALTHGQCAAQPLRLQLQLDAQALVLEMHDAGS AFDPCAAPLPEVTDELDDRAIGGLGLFLVHQFADHIDYRRDGAYNVVRVTLLHPYAPVPEALS >Mature_143_residues MKLELAIAPSLAQLAGANDALERSLTLEGLHAERIGQVRLIVEELGCNALTHGQCAAQPLRLQLQLDAQALVLEMHDAGS AFDPCAAPLPEVTDELDDRAIGGLGLFLVHQFADHIDYRRDGAYNVVRVTLLHPYAPVPEALS
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15411; Mature: 15411
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLELAIAPSLAQLAGANDALERSLTLEGLHAERIGQVRLIVEELGCNALTHGQCAAQPL CEEEEEECCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE RLQLQLDAQALVLEMHDAGSAFDPCAAPLPEVTDELDDRAIGGLGLFLVHQFADHIDYRR EEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC DGAYNVVRVTLLHPYAPVPEALS CCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MKLELAIAPSLAQLAGANDALERSLTLEGLHAERIGQVRLIVEELGCNALTHGQCAAQPL CEEEEEECCHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE RLQLQLDAQALVLEMHDAGSAFDPCAAPLPEVTDELDDRAIGGLGLFLVHQFADHIDYRR EEEEEECCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC DGAYNVVRVTLLHPYAPVPEALS CCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA