| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241324
Identifier: 21241324
GI number: 21241324
Start: 655182
End: 656129
Strand: Reverse
Name: 21241324
Synonym: XAC0553
Alternate gene names: NA
Gene position: 656129-655182 (Counterclockwise)
Preceding gene: 21241329
Following gene: 21241322
Centisome position: 12.68
GC content: 73.31
Gene sequence:
>948_bases ATGGGGCTGACCTGGGCACTGAGCGACGGCCGTGCCGGCAATGCGCGCCAGGCCGAGGCGCTGGCGCGTGCATTGCAGCC CGATGCCTACCAGCCCCTGCACCTGGAGCCCAACGCGCCGTGGCGTTGGGCGGCGCCGTGGCGGCTCCCCGGCGCACGGC GGGCGTTTGGCGCGGCATTTGCCGGGCAACTGACGCAGCCCCCGGCGCTGGCCATCGGCTGCGGCAGGCAGGCGGCGCTG GCCACCCGGTTGCTGCGTGCCCACGGCAGCCGCAGCGTGCAGATCCTGGACCCGCGTCTGGATCCGCGGCACTGGGACCT GCTGGTCGTGCCCGAGCACGATGCACGGCGCGGCAGCAACGTGCTCACCCTGCTCGGCAGCCTGCACCCGGTGGACGATG CGTGGCTGGCGGCCGGGCGGGCGGCCTTTCCCGCACTAGGCGGCTTGCCCGGCCCGCGGCTGGCCCTGCTGGTCGGTGGG CCCACCGACCAGGTGCCGTGGACGCCACAGGCGCTGGCGGCGCTGTGCACGCGCTTGAGCGCCCAACTGCGCGCGCTGGG CGGCAGCCTGCTGGTCACCACCTCGCGCCGCACACCGGGCGATGCAATCGCAACGCTGCGCGCGGCCTGCGTCGGCCTGC CGCATCTGCTGTGGTGCGACGAACGCGATGGGCCCAACCCGTATGCCGGCCTGCTCGGCTGGGCCGATGCCATCGTGGCC AGCGCCGATTCGGTCAACCTGCTCTCCGAAGCCTGCGCCACCCGTGTGGCGGTGACCGCCGCGTTCGGCGAACAGGCAGG CGGGCGCGTGGGCGCCTACCTGCAGGCATTGCGACAACGCCAGCGTTTGCACCCGGTGGATGAAGTTCTCGCCGGCGCTG TCGATATCGTTGCAGTGCGCGAAACCGAGCGCATCGCCATGCAGGTGCGCGCGCGCCTGCTGGCATGA
Upstream 100 bases:
>100_bases GCTGCGGCGTCGGCGCCAGTGTGAAGACCCGCAGTGTAGAGTGGCGCGATTGCCGCCACACGCGTTCAATCTGAAACAAA TCTATGTCGGATCTGAAACG
Downstream 100 bases:
>100_bases CCCAAGACCCGTCAGCGGGCCACTGATACTCAGGACGCTTCGCATGACAGGGTTGGCGGGCCACTCGCTGCGTCCCAAGC AGTGGCCGAGTCACGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGLTWALSDGRAGNARQAEALARALQPDAYQPLHLEPNAPWRWAAPWRLPGARRAFGAAFAGQLTQPPALAIGCGRQAAL ATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDARRGSNVLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGG PTDQVPWTPQALAALCTRLSAQLRALGGSLLVTTSRRTPGDAIATLRAACVGLPHLLWCDERDGPNPYAGLLGWADAIVA SADSVNLLSEACATRVAVTAAFGEQAGGRVGAYLQALRQRQRLHPVDEVLAGAVDIVAVRETERIAMQVRARLLA
Sequences:
>Translated_315_residues MGLTWALSDGRAGNARQAEALARALQPDAYQPLHLEPNAPWRWAAPWRLPGARRAFGAAFAGQLTQPPALAIGCGRQAAL ATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDARRGSNVLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGG PTDQVPWTPQALAALCTRLSAQLRALGGSLLVTTSRRTPGDAIATLRAACVGLPHLLWCDERDGPNPYAGLLGWADAIVA SADSVNLLSEACATRVAVTAAFGEQAGGRVGAYLQALRQRQRLHPVDEVLAGAVDIVAVRETERIAMQVRARLLA >Mature_314_residues GLTWALSDGRAGNARQAEALARALQPDAYQPLHLEPNAPWRWAAPWRLPGARRAFGAAFAGQLTQPPALAIGCGRQAALA TRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDARRGSNVLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGGP TDQVPWTPQALAALCTRLSAQLRALGGSLLVTTSRRTPGDAIATLRAACVGLPHLLWCDERDGPNPYAGLLGWADAIVAS ADSVNLLSEACATRVAVTAAFGEQAGGRVGAYLQALRQRQRLHPVDEVLAGAVDIVAVRETERIAMQVRARLLA
Specific function: Unknown
COG id: COG3660
COG function: function code M; Predicted nucleoside-diphosphate-sugar epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33369; Mature: 33237
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTWALSDGRAGNARQAEALARALQPDAYQPLHLEPNAPWRWAAPWRLPGARRAFGAAF CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHH AGQLTQPPALAIGCGRQAALATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDARRGSN HCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCH VLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGGPTDQVPWTPQALAALCTRLS HHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH AQLRALGGSLLVTTSRRTPGDAIATLRAACVGLPHLLWCDERDGPNPYAGLLGWADAIVA HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHH SADSVNLLSEACATRVAVTAAFGEQAGGRVGAYLQALRQRQRLHPVDEVLAGAVDIVAVR CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHEEEEC ETERIAMQVRARLLA HHHHHHHHHHHHHCC >Mature Secondary Structure GLTWALSDGRAGNARQAEALARALQPDAYQPLHLEPNAPWRWAAPWRLPGARRAFGAAF CEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHH AGQLTQPPALAIGCGRQAALATRLLRAHGSRSVQILDPRLDPRHWDLLVVPEHDARRGSN HCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCH VLTLLGSLHPVDDAWLAAGRAAFPALGGLPGPRLALLVGGPTDQVPWTPQALAALCTRLS HHHHHHCCCCCCHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH AQLRALGGSLLVTTSRRTPGDAIATLRAACVGLPHLLWCDERDGPNPYAGLLGWADAIVA HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHH SADSVNLLSEACATRVAVTAAFGEQAGGRVGAYLQALRQRQRLHPVDEVLAGAVDIVAVR CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCHHHEEEEC ETERIAMQVRARLLA HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA