Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is yhhQ [C]

Identifier: 21241322

GI number: 21241322

Start: 651950

End: 652501

Strand: Reverse

Name: yhhQ [C]

Synonym: XAC0551

Alternate gene names: 21241322

Gene position: 652501-651950 (Counterclockwise)

Preceding gene: 21241324

Following gene: 21241320

Centisome position: 12.61

GC content: 67.93

Gene sequence:

>552_bases
ATGCGTCTTGCCTCGCCACCTGTATTGGCCCCGCTCACCGCCCGTGCATTGATCTGGGCGGTGCTGGCAATGGGCGCGGT
GGTCCTGCTGTCCAACATCCTGGTGCAATACCCGATCAACGACTGGCTGACCTGGGGCGCGTTCTCCTACCCGCTGGCGT
TCCTGGTCAGCAACCTGATCAACCGCCGCTTCGGCCCGCGCGCCGCGCGCCACGTTGCCTGGTGCGGGTTCGCGCTGGCG
GTGCTGCTGTCGATCTGGCTGGCGACGCCACGCATTGCGGTGGCCTCGTGCAGTGCCTTCATCGCGGCACAATTGCTGGA
CATCAGCGTGTTCGACCGCCTGCGCGACGGCAGCTGGTGGCGCGCGCCGATCGTGGCCACCACCTGCAGCGCCACCCTGG
ACACCACGATCTTCTGGAGCATTGCGTTTGCCGGCGCGAGCCTGCCGTGGGTCAGCTGGGCCGCAGGCGATCTGGCGGTA
AAACTGGGCATGGGCGTGTTCCTGCTCGGCCCGTTTCGCGCCCTGCTGTGGCGGACTGCGCCGCGTCGGTAG

Upstream 100 bases:

>100_bases
GTCATCGCGCACCGGCGCTGTGGCCGGCGAGCGCATCGCTGCGCTGGTCCATCCCTGCCGTCGAAGAGATAATTGCGCGC
CCACTCAACACCGTGTCGCC

Downstream 100 bases:

>100_bases
AACGCTGACGCTCATGGGTGCGTTGCCTCCGCCAGGACAGCAAGGCACCGTTGCTGCCGTTTGCTGCAGCTGCATCGAAA
GCGGCGTACTCACCAGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRLASPPVLAPLTARALIWAVLAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLINRRFGPRAARHVAWCGFALA
VLLSIWLATPRIAVASCSAFIAAQLLDISVFDRLRDGSWWRAPIVATTCSATLDTTIFWSIAFAGASLPWVSWAAGDLAV
KLGMGVFLLGPFRALLWRTAPRR

Sequences:

>Translated_183_residues
MRLASPPVLAPLTARALIWAVLAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLINRRFGPRAARHVAWCGFALA
VLLSIWLATPRIAVASCSAFIAAQLLDISVFDRLRDGSWWRAPIVATTCSATLDTTIFWSIAFAGASLPWVSWAAGDLAV
KLGMGVFLLGPFRALLWRTAPRR
>Mature_183_residues
MRLASPPVLAPLTARALIWAVLAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLINRRFGPRAARHVAWCGFALA
VLLSIWLATPRIAVASCSAFIAAQLLDISVFDRLRDGSWWRAPIVATTCSATLDTTIFWSIAFAGASLPWVSWAAGDLAV
KLGMGVFLLGPFRALLWRTAPRR

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhhQ [H]

Homologues:

Organism=Escherichia coli, GI1789882, Length=200, Percent_Identity=31.5, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 19995; Mature: 19995

Theoretical pI: Translated: 11.76; Mature: 11.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLASPPVLAPLTARALIWAVLAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHH
NRRFGPRAARHVAWCGFALAVLLSIWLATPRIAVASCSAFIAAQLLDISVFDRLRDGSWW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
RAPIVATTCSATLDTTIFWSIAFAGASLPWVSWAAGDLAVKLGMGVFLLGPFRALLWRTA
ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PRR
CCC
>Mature Secondary Structure
MRLASPPVLAPLTARALIWAVLAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHH
NRRFGPRAARHVAWCGFALAVLLSIWLATPRIAVASCSAFIAAQLLDISVFDRLRDGSWW
HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
RAPIVATTCSATLDTTIFWSIAFAGASLPWVSWAAGDLAVKLGMGVFLLGPFRALLWRTA
ECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PRR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]