| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241255
Identifier: 21241255
GI number: 21241255
Start: 572490
End: 573206
Strand: Direct
Name: 21241255
Synonym: XAC0482
Alternate gene names: NA
Gene position: 572490-573206 (Clockwise)
Preceding gene: 21241254
Following gene: 21241257
Centisome position: 11.06
GC content: 66.53
Gene sequence:
>717_bases ATGACTGAGTCGTATCCCGTCCCGCGCGAGGACGCACCGCTGGTGGTCTTCGACTTCGACCACACCTTGTACGACGGCGA TTCCGGCAGTCATCTGTTTGCCTGGCTGATCAAGCGCAACCCGTTGCGCTTGCTGGTTGCGCTGTTGGCCTCGCCCATTC TCGGCCCGATGGTGGCGATGCTGCCAACCCGGCGGCGCGGCGTGTCCGGCTATGTGTGGATCGCCACGTTCGGCCTGCAC CGCGCGCGCGAGTTCAACCGTTTCATCGACGCATACGTGCTCAAGCATGAAGCGCAGATCCGCCAGCGCCTGCTTCCGCA TGCCTTGCAGGTCTTCACCCAACACCGCGCTGCCGGCGACCGTGTGGTGGTCGCCACCGGCGCACCGCCGGAGTTGGCGC GCGCCATTCTCGGCTTTGTGGCCCACCAGGACGTGCCGGTCATCGGTAGCCTGGTCGGCCCGCGCCTGGGCGCCGTCACC GCGCGACGTCACTGCCATAACGAAGAAAAGATGCGCATGCTGCGCGAGCGCGGCTACGCCGATATCGCCATCGCCTACTC GGACAGCACCGCAGATCTGCCGCTCTTGAAGGCCGCGCGCGCGCCGGTGGTGGTCAATCCCAAGGCCAATCGCGAAGCGC TGTTCCGCCAGGTGTTGCCGACAGGCACGCCCATCCTCAACTGGGGTTGCCGCGACCGTGGCGGCAAGGCCCTGTAG
Upstream 100 bases:
>100_bases CAACGGATGCGCAGTCACGATGTGAACGCGTTTCTGGTCGGCGAGACCTTCATGCGCGCGGCAGAACCCGGCGAGTCGCT GCGTCAGCTATTCTTCGCGC
Downstream 100 bases:
>100_bases GCGAGCGCAACATCCAGGCGGCTAGATCGTTTCGCGCGGAGCGACACGATTGCGCGGTCCAGCTTGCGACGGCGCATCTG TGCAGCGGATCGCACGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTESYPVPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMVAMLPTRRRGVSGYVWIATFGLH RAREFNRFIDAYVLKHEAQIRQRLLPHALQVFTQHRAAGDRVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVT ARRHCHNEEKMRMLRERGYADIAIAYSDSTADLPLLKAARAPVVVNPKANREALFRQVLPTGTPILNWGCRDRGGKAL
Sequences:
>Translated_238_residues MTESYPVPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMVAMLPTRRRGVSGYVWIATFGLH RAREFNRFIDAYVLKHEAQIRQRLLPHALQVFTQHRAAGDRVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVT ARRHCHNEEKMRMLRERGYADIAIAYSDSTADLPLLKAARAPVVVNPKANREALFRQVLPTGTPILNWGCRDRGGKAL >Mature_237_residues TESYPVPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMVAMLPTRRRGVSGYVWIATFGLHR AREFNRFIDAYVLKHEAQIRQRLLPHALQVFTQHRAAGDRVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVTA RRHCHNEEKMRMLRERGYADIAIAYSDSTADLPLLKAARAPVVVNPKANREALFRQVLPTGTPILNWGCRDRGGKAL
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26419; Mature: 26288
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESYPVPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMVAM CCCCCCCCCCCCCEEEEECCCEEECCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHH LPTRRRGVSGYVWIATFGLHRAREFNRFIDAYVLKHEAQIRQRLLPHALQVFTQHRAAGD CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVTARRHCHNEEKMRMLRERGYA EEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCC DIAIAYSDSTADLPLLKAARAPVVVNPKANREALFRQVLPTGTPILNWGCRDRGGKAL EEEEEECCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure TESYPVPREDAPLVVFDFDHTLYDGDSGSHLFAWLIKRNPLRLLVALLASPILGPMVAM CCCCCCCCCCCCEEEEECCCEEECCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHH LPTRRRGVSGYVWIATFGLHRAREFNRFIDAYVLKHEAQIRQRLLPHALQVFTQHRAAGD CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RVVVATGAPPELARAILGFVAHQDVPVIGSLVGPRLGAVTARRHCHNEEKMRMLRERGYA EEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCC DIAIAYSDSTADLPLLKAARAPVVVNPKANREALFRQVLPTGTPILNWGCRDRGGKAL EEEEEECCCCCCCHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA