| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241207
Identifier: 21241207
GI number: 21241207
Start: 516405
End: 517841
Strand: Direct
Name: 21241207
Synonym: XAC0434
Alternate gene names: NA
Gene position: 516405-517841 (Clockwise)
Preceding gene: 21241205
Following gene: 21241208
Centisome position: 9.98
GC content: 68.34
Gene sequence:
>1437_bases GTGCGAGTCATCAAGCGGAATTTGCACATGGAAACCCATATCACCGTGATCGGCGCCGGCTTCTGCGGCACCGCGCTGGT CCGTGCACTGGCGCAGACGGCCGATGCGCAGGTACGCATCACCCTGGTCGGCGTGGCCGAGACCTTCGGTAGCGGGATCG CCTATGGCGCAGCGCGGCCGGAGCATCTGCTCAACGTGCGTGCCAAGGATCTGGGCATCGACGCGCAGGCGCCCGGTGCC TTCGCCGACACCCTGCATCTGGGCGAGAGCGGCCGGTTGGAGTTCCTGCCGCGGCTGGCTTATGGCGACTATCTGCGTAG CGAGCTGGATGCGGCGGTGAGCGGCGCGCAGGCCTCGATCATGCGGCTGTCGCAGGAAGCAGTGGCGGTGGAGCGCGTGC GCAAGGGTTTCCGCGTGTTTCTGGCCAATGGCGATGCCTTCCAGAGCGATCGCGTGGTGCTCGCAGTCGGCGCCTTGCAA CCGCAGGCGCTGGCGGGTATCGGCCCACGCTTGAGCGTGCATCCGCGGTATATCGGCTGGCCGTGGCAGGGCGAGGCGTT GGCGCGTTTGTCGCCGGACGACGATGTATTGATCGTCGGCACCGGGCTGACCATGGTGGACGTGGCGCTGACCTTGCACA CGCGCGGTCATCGCGGCCGTTTGCTGGCGATTTCGCGGCGCGGACTGGCCCCGCAGGCGCATCTGCGCCAGCCCGGCGCG CCGCTCGAATTGCCGCCGCATCTGCAGCGTGCGCTCAAGGACGCCGACCTGCGCGGTCTGCTGCGCGGGGTGCGTCAACT CAGCGCGGTGGTCGATGACTGGCGTCGCGTGGTGGATGCGCTGCGCCCGCATCTGCAGTCGCTGTGGCAGCGTCTGGAGT TGAGCCAGCGTGCGCGCTTCCTTCGGCACCTGCGCCCCTATTGGGAAGTGGCGCGGCATCGCGTTGCGCCCGGTGCCGCC GAACAGCTGGCGCAGTTGCAGGCATCGGGCCAGTTGCAGATCGTCTCTGCGCGCCTGCTGCGTGCGCGCTGGGTGCCCGA TGGCGTGGAAGCGGTGATTCGCCCACGCGGCTCTGCCGATGCGCAGACTGGTCATTACGATGCAGTGATTCGCGCCACCG GGCTGGATACCGACATCGATCGCACCAGCGATCCCTTGATCGCCGGCATGCGCGAAGCGGGTCTGTTGCGCGCCGATCCG TTGGGCCTGGGCGTTGACACCGATGCGCAGTTGCGCGTTCGCGACAACGCCGGTCAAATCGTGCCGGGACTGTATTGCGT CGGGCCGCTCTTGCGGGGGAGGTACTGGGAAATCACCGCCGTGCCCGAGCTGCGCGTGGCCACGCGTGCGCTGGCCGACC GCTTGTTGCTGGGCGCGACGCCAGCGTTACAGCCCACGCCCGAGCAAGTGCGGCGCGAGGTCAATGCGCGCCTGTAG
Upstream 100 bases:
>100_bases GCCCCGCCTGCCTCATCACTGCCGGCGATCAGCTCATGCGTTTTTGATTGCTTGGCGCTAACCAAACGTTTACACACCGG CGACGCGCTGCGGGCACAAC
Downstream 100 bases:
>100_bases GTGCAGAGATTGGGGGAGGTCTTTGACGATCTCGACTGCGTATCGCACCGCCCGCGCATGCGCAGTGGTGGCCGACATGT GGATCTGTGCACGGCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydroxyacylglutathione Hydrolase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Beta-Lactamase Domain-Containing Protein; FAD-Dependent Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; FAD-Dependent Oxidoreductase Protein; Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MRVIKRNLHMETHITVIGAGFCGTALVRALAQTADAQVRITLVGVAETFGSGIAYGAARPEHLLNVRAKDLGIDAQAPGA FADTLHLGESGRLEFLPRLAYGDYLRSELDAAVSGAQASIMRLSQEAVAVERVRKGFRVFLANGDAFQSDRVVLAVGALQ PQALAGIGPRLSVHPRYIGWPWQGEALARLSPDDDVLIVGTGLTMVDVALTLHTRGHRGRLLAISRRGLAPQAHLRQPGA PLELPPHLQRALKDADLRGLLRGVRQLSAVVDDWRRVVDALRPHLQSLWQRLELSQRARFLRHLRPYWEVARHRVAPGAA EQLAQLQASGQLQIVSARLLRARWVPDGVEAVIRPRGSADAQTGHYDAVIRATGLDTDIDRTSDPLIAGMREAGLLRADP LGLGVDTDAQLRVRDNAGQIVPGLYCVGPLLRGRYWEITAVPELRVATRALADRLLLGATPALQPTPEQVRREVNARL
Sequences:
>Translated_478_residues MRVIKRNLHMETHITVIGAGFCGTALVRALAQTADAQVRITLVGVAETFGSGIAYGAARPEHLLNVRAKDLGIDAQAPGA FADTLHLGESGRLEFLPRLAYGDYLRSELDAAVSGAQASIMRLSQEAVAVERVRKGFRVFLANGDAFQSDRVVLAVGALQ PQALAGIGPRLSVHPRYIGWPWQGEALARLSPDDDVLIVGTGLTMVDVALTLHTRGHRGRLLAISRRGLAPQAHLRQPGA PLELPPHLQRALKDADLRGLLRGVRQLSAVVDDWRRVVDALRPHLQSLWQRLELSQRARFLRHLRPYWEVARHRVAPGAA EQLAQLQASGQLQIVSARLLRARWVPDGVEAVIRPRGSADAQTGHYDAVIRATGLDTDIDRTSDPLIAGMREAGLLRADP LGLGVDTDAQLRVRDNAGQIVPGLYCVGPLLRGRYWEITAVPELRVATRALADRLLLGATPALQPTPEQVRREVNARL >Mature_478_residues MRVIKRNLHMETHITVIGAGFCGTALVRALAQTADAQVRITLVGVAETFGSGIAYGAARPEHLLNVRAKDLGIDAQAPGA FADTLHLGESGRLEFLPRLAYGDYLRSELDAAVSGAQASIMRLSQEAVAVERVRKGFRVFLANGDAFQSDRVVLAVGALQ PQALAGIGPRLSVHPRYIGWPWQGEALARLSPDDDVLIVGTGLTMVDVALTLHTRGHRGRLLAISRRGLAPQAHLRQPGA PLELPPHLQRALKDADLRGLLRGVRQLSAVVDDWRRVVDALRPHLQSLWQRLELSQRARFLRHLRPYWEVARHRVAPGAA EQLAQLQASGQLQIVSARLLRARWVPDGVEAVIRPRGSADAQTGHYDAVIRATGLDTDIDRTSDPLIAGMREAGLLRADP LGLGVDTDAQLRVRDNAGQIVPGLYCVGPLLRGRYWEITAVPELRVATRALADRLLLGATPALQPTPEQVRREVNARL
Specific function: Unknown
COG id: COG4529
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52087; Mature: 52087
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIKRNLHMETHITVIGAGFCGTALVRALAQTADAQVRITLVGVAETFGSGIAYGAARP CCCHHHHCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEEEHHHHCCCCEECCCCC EHLLNVRAKDLGIDAQAPGAFADTLHLGESGRLEFLPRLAYGDYLRSELDAAVSGAQASI HHHHHCHHHHCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH MRLSQEAVAVERVRKGFRVFLANGDAFQSDRVVLAVGALQPQALAGIGPRLSVHPRYIGW HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCHHHHCCCCCCEECCCEECC PWQGEALARLSPDDDVLIVGTGLTMVDVALTLHTRGHRGRLLAISRRGLAPQAHLRQPGA CCCCCEEEECCCCCCEEEEECCHHHHHEEHEEECCCCCCCEEEEECCCCCCHHHHCCCCC PLELPPHLQRALKDADLRGLLRGVRQLSAVVDDWRRVVDALRPHLQSLWQRLELSQRARF CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHLRPYWEVARHRVAPGAAEQLAQLQASGQLQIVSARLLRARWVPDGVEAVIRPRGSAD HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHCCCCCCC AQTGHYDAVIRATGLDTDIDRTSDPLIAGMREAGLLRADPLGLGVDTDAQLRVRDNAGQI CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCC VPGLYCVGPLLRGRYWEITAVPELRVATRALADRLLLGATPALQPTPEQVRREVNARL CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRVIKRNLHMETHITVIGAGFCGTALVRALAQTADAQVRITLVGVAETFGSGIAYGAARP CCCHHHHCCEEEEEEEEECCHHHHHHHHHHHHCCCCEEEEEEEEEHHHHCCCCEECCCCC EHLLNVRAKDLGIDAQAPGAFADTLHLGESGRLEFLPRLAYGDYLRSELDAAVSGAQASI HHHHHCHHHHCCCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH MRLSQEAVAVERVRKGFRVFLANGDAFQSDRVVLAVGALQPQALAGIGPRLSVHPRYIGW HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCHHHHCCCCCCEECCCEECC PWQGEALARLSPDDDVLIVGTGLTMVDVALTLHTRGHRGRLLAISRRGLAPQAHLRQPGA CCCCCEEEECCCCCCEEEEECCHHHHHEEHEEECCCCCCCEEEEECCCCCCHHHHCCCCC PLELPPHLQRALKDADLRGLLRGVRQLSAVVDDWRRVVDALRPHLQSLWQRLELSQRARF CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHLRPYWEVARHRVAPGAAEQLAQLQASGQLQIVSARLLRARWVPDGVEAVIRPRGSAD HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHHCCCCCCC AQTGHYDAVIRATGLDTDIDRTSDPLIAGMREAGLLRADPLGLGVDTDAQLRVRDNAGQI CCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCC VPGLYCVGPLLRGRYWEITAVPELRVATRALADRLLLGATPALQPTPEQVRREVNARL CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA