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The map label for this gene is virK

Identifier: 21241208

GI number: 21241208

Start: 518070

End: 518501

Strand: Direct

Name: virK

Synonym: XAC0435

Alternate gene names: NA

Gene position: 518070-518501 (Clockwise)

Preceding gene: 21241207

Following gene: 21241210

Centisome position: 10.01

GC content: 63.43

Gene sequence:

>432_bases
ATGCCACGTCTTGTTCCTGCCGCGCTGTTCGCCACGCTTTGCGCGTGTGCGCTGCCTGCCCTGGCCACCGAATCGCTGAA
TAACCGCGCCGAGGTTCTCGCTGCCCTGGACGCCGGATACGATGTCAGTGTGAGCACCGACCTTGCACGTTGCACGCCCG
AAGAAGGCACGCCGGCCACCCAGACCCGCGGCGGCCGCCACATCGATGCCTATCGCATCACCGCAGACGGTACCGTGGCC
TTTTCCGATGCGCATTTCACCGTGGCCAACGACGGCAAGCCGATCCAGCAGTTCATGCGCTACCAATTGCGCCCGGATGA
CACGCTGCGCTTCACCACCTACATGTACGACTTGCCGGGCCTGCAGCAACGCGGGCCGGTGTTGGCGTATCAATGCAAGA
TCAATGCAGGCGTGCGCTTCCACGCCGATTGA

Upstream 100 bases:

>100_bases
CGTAGTGCCGCGCGCCCATGCAGAACAAACTGGGTCATGTTGGTGGTCCTGGGCGCATGCAAGCCCGGGCCGCCGCATCC
CTCTCTGCCTGGAGTTTGCT

Downstream 100 bases:

>100_bases
GCATGGCTGACAAGACATCTGATCGCGCGGTTGGTCAGCTCTTGCGGTTGCATGCGCGCGGCGGCATCGGCAGCAGTGGG
GTGCCACGTGCGCAGTTACC

Product: VirK protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MPRLVPAALFATLCACALPALATESLNNRAEVLAALDAGYDVSVSTDLARCTPEEGTPATQTRGGRHIDAYRITADGTVA
FSDAHFTVANDGKPIQQFMRYQLRPDDTLRFTTYMYDLPGLQQRGPVLAYQCKINAGVRFHAD

Sequences:

>Translated_143_residues
MPRLVPAALFATLCACALPALATESLNNRAEVLAALDAGYDVSVSTDLARCTPEEGTPATQTRGGRHIDAYRITADGTVA
FSDAHFTVANDGKPIQQFMRYQLRPDDTLRFTTYMYDLPGLQQRGPVLAYQCKINAGVRFHAD
>Mature_142_residues
PRLVPAALFATLCACALPALATESLNNRAEVLAALDAGYDVSVSTDLARCTPEEGTPATQTRGGRHIDAYRITADGTVAF
SDAHFTVANDGKPIQQFMRYQLRPDDTLRFTTYMYDLPGLQQRGPVLAYQCKINAGVRFHAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010694 [H]

Pfam domain/function: PF06903 VirK [H]

EC number: NA

Molecular weight: Translated: 15581; Mature: 15450

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLVPAALFATLCACALPALATESLNNRAEVLAALDAGYDVSVSTDLARCTPEEGTPAT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCEEECCCHHHCCCCCCCCCC
QTRGGRHIDAYRITADGTVAFSDAHFTVANDGKPIQQFMRYQLRPDDTLRFTTYMYDLPG
CCCCCCEEEEEEEECCCEEEECCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEEECCC
LQQRGPVLAYQCKINAGVRFHAD
CCCCCCEEEEEEEECCCEEEECC
>Mature Secondary Structure 
PRLVPAALFATLCACALPALATESLNNRAEVLAALDAGYDVSVSTDLARCTPEEGTPAT
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCEEECCCHHHCCCCCCCCCC
QTRGGRHIDAYRITADGTVAFSDAHFTVANDGKPIQQFMRYQLRPDDTLRFTTYMYDLPG
CCCCCCEEEEEEEECCCEEEECCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEEEECCC
LQQRGPVLAYQCKINAGVRFHAD
CCCCCCEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2708311 [H]