Click here to switch to the map view.

The map label for this gene is hrcT [H]

Identifier: 21241187

GI number: 21241187

Start: 483531

End: 484361

Strand: Direct

Name: hrcT [H]

Synonym: XAC0414

Alternate gene names: 21241187

Gene position: 483531-484361 (Clockwise)

Preceding gene: 21241186

Following gene: 21241188

Centisome position: 9.34

GC content: 61.49

Gene sequence:

>831_bases
ATGAACGACGCCACCGATGCCTTGCTGGCCATTTCCTCGCAGGGCGTGTCGCTGTTGACCCTGCTGGCATTGTGCGGGGT
GCGCGTGTTCGTGATGTTCATCGTGCTACCGGCAACGGCGCAGGACAGTCTGCCCGGAATCGCGCGCAACGGCGTGATCT
ACGTCCTGAGCTCGTTCATCGCTTATGGGCAACCGGCCGATGCGCTGGCGAAGATCCAGACGGTCGGCCTGGTCGGGGTG
GTGTTCAAGGAGGCGTTCATCGGTCTGCTGATCGGGTTTGCCGCATCGACGGTGTTCTGGATCGCCGAGAGCGTTGGCTT
GCTGATCGACGACCTTGCCGGTTACAACAATGTGCAGATGACCAACCCGCTCAGCGGCCAGCAAAGCACGCCGGTGTCCA
CGGTGTTGCTGCAACTGGCCATCGTGTCGTTCTACGCGCTGGGCGGCATGTTGATGTTGCTCGGCGCGTTGTTCGAATCG
TTTCGCTGGTGGCCGCTGACCCAGCTTGGGCCGAACATGGGGGCGGTTGCCGAATCGTTCGTGATCCAGCAATCCGACAG
CATGATGGCCGCGGTCGTCAAACTGTCCGCACCGGTGATGCTGGTGCTTGTGCTGGTGGATCTAGCGATCGGCCTGGTGG
CGCGTGCGGCCGACAAGCTCGAACCGTCGAATTTGAGTCAGCCAATCCGTGGGGTGCTGGCGTTATTGCTGCTCGCCTTG
CTGACCAGCGTCTTCATCGCGCAATTCGGCGAAGCGCTTGGTTTCCTGCATTTCCAGCAGCAATTGCACGATGCCGCCAA
CGTGGGTGGCAAGAGAGCCGCGTCGCACTGA

Upstream 100 bases:

>100_bases
GCCGCGCCCGACAGGCGCAACGCGAGGCAGCGGAAGAAGAAGACGCGATCGAGGCGCTGGTCGCGCTGCGTTCGCACCGC
ACCGCGCAGCGGGGCGCCCG

Downstream 100 bases:

>100_bases
TCTTTATTGAGACATTCCCGGCTTTGCACTTCCTACACTGATCGCTACCGACTTCTTCACTTGCCTAGCAGAGGGAACGC
CATGGCTCCTGCCTGTACCA

Product: HrcT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNDATDALLAISSQGVSLLTLLALCGVRVFVMFIVLPATAQDSLPGIARNGVIYVLSSFIAYGQPADALAKIQTVGLVGV
VFKEAFIGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQMTNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFES
FRWWPLTQLGPNMGAVAESFVIQQSDSMMAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
LTSVFIAQFGEALGFLHFQQQLHDAANVGGKRAASH

Sequences:

>Translated_276_residues
MNDATDALLAISSQGVSLLTLLALCGVRVFVMFIVLPATAQDSLPGIARNGVIYVLSSFIAYGQPADALAKIQTVGLVGV
VFKEAFIGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQMTNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFES
FRWWPLTQLGPNMGAVAESFVIQQSDSMMAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
LTSVFIAQFGEALGFLHFQQQLHDAANVGGKRAASH
>Mature_276_residues
MNDATDALLAISSQGVSLLTLLALCGVRVFVMFIVLPATAQDSLPGIARNGVIYVLSSFIAYGQPADALAKIQTVGLVGV
VFKEAFIGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQMTNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFES
FRWWPLTQLGPNMGAVAESFVIQQSDSMMAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
LTSVFIAQFGEALGFLHFQQQLHDAANVGGKRAASH

Specific function: Component of the yop secretion machinery [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 29059; Mature: 29059

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDATDALLAISSQGVSLLTLLALCGVRVFVMFIVLPATAQDSLPGIARNGVIYVLSSFI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHH
AYGQPADALAKIQTVGLVGVVFKEAFIGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
TNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFESFRWWPLTQLGPNMGAVAESF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
VIQQSDSMMAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LTSVFIAQFGEALGFLHFQQQLHDAANVGGKRAASH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNDATDALLAISSQGVSLLTLLALCGVRVFVMFIVLPATAQDSLPGIARNGVIYVLSSFI
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHH
AYGQPADALAKIQTVGLVGVVFKEAFIGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
TNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFESFRWWPLTQLGPNMGAVAESF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
VIQQSDSMMAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LTSVFIAQFGEALGFLHFQQQLHDAANVGGKRAASH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]