| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is hrpB7
Identifier: 21241186
GI number: 21241186
Start: 483025
End: 483534
Strand: Direct
Name: hrpB7
Synonym: XAC0413
Alternate gene names: NA
Gene position: 483025-483534 (Clockwise)
Preceding gene: 21241185
Following gene: 21241187
Centisome position: 9.33
GC content: 66.86
Gene sequence:
>510_bases ATGCGTGAGCCTGCCCACACCTGGTCGGTGCTGCATCAGCTCAAGGCGCGTCGCTGCGAGCGCATGCAGGAACGTTCGAG CGATTGCAGGCGTGCATTGGAACACTGCGACCGTGAGCTCGCCAGGTGCAGACAGGAGGCAGAGGCTTGCACCACGCGCT TGGCCAGTTGCGACGCCGCGCTGATGGACAAGGCCGGTGTGGGTGGTTCGATCGATATCGACACGATCCTGCAGCATGAA CGCTTCCGCACCGTGCTGGTCGAGGCCTGTCGCGCTGCCGAGCAGGCGCAGACAGCGGCGAGCCAGTCGTTGCAAAGCGC CCGCGATGAACTGGCGTCCGTGCAGCAGGCGCTGAGCAAGCTGCAGGCACAGGCGCAGGTGTATGCAGACAAAGCCGCCA GTGCACGCCGCGCCCGACAGGCGCAACGCGAGGCAGCGGAAGAAGAAGACGCGATCGAGGCGCTGGTCGCGCTGCGTTCG CACCGCACCGCGCAGCGGGGCGCCCGATGA
Upstream 100 bases:
>100_bases ATCGACAGGATCGATGCGATCCGCGACTTTCTCAGCCAACCGACCGACCGGCTCAGTGCGTACGAAAGTACGCTGGAGCA GCTGGCCAGCGTGACCGACG
Downstream 100 bases:
>100_bases ACGACGCCACCGATGCCTTGCTGGCCATTTCCTCGCAGGGCGTGTCGCTGTTGACCCTGCTGGCATTGTGCGGGGTGCGC GTGTTCGTGATGTTCATCGT
Product: HrpB7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MREPAHTWSVLHQLKARRCERMQERSSDCRRALEHCDRELARCRQEAEACTTRLASCDAALMDKAGVGGSIDIDTILQHE RFRTVLVEACRAAEQAQTAASQSLQSARDELASVQQALSKLQAQAQVYADKAASARRARQAQREAAEEEDAIEALVALRS HRTAQRGAR
Sequences:
>Translated_169_residues MREPAHTWSVLHQLKARRCERMQERSSDCRRALEHCDRELARCRQEAEACTTRLASCDAALMDKAGVGGSIDIDTILQHE RFRTVLVEACRAAEQAQTAASQSLQSARDELASVQQALSKLQAQAQVYADKAASARRARQAQREAAEEEDAIEALVALRS HRTAQRGAR >Mature_169_residues MREPAHTWSVLHQLKARRCERMQERSSDCRRALEHCDRELARCRQEAEACTTRLASCDAALMDKAGVGGSIDIDTILQHE RFRTVLVEACRAAEQAQTAASQSLQSARDELASVQQALSKLQAQAQVYADKAASARRARQAQREAAEEEDAIEALVALRS HRTAQRGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18798; Mature: 18798
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREPAHTWSVLHQLKARRCERMQERSSDCRRALEHCDRELARCRQEAEACTTRLASCDAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMDKAGVGGSIDIDTILQHERFRTVLVEACRAAEQAQTAASQSLQSARDELASVQQALSK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAQAQVYADKAASARRARQAQREAAEEEDAIEALVALRSHRTAQRGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MREPAHTWSVLHQLKARRCERMQERSSDCRRALEHCDRELARCRQEAEACTTRLASCDAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMDKAGVGGSIDIDTILQHERFRTVLVEACRAAEQAQTAASQSLQSARDELASVQQALSK HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQAQAQVYADKAASARRARQAQREAAEEEDAIEALVALRSHRTAQRGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA