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The map label for this gene is pobB [H]

Identifier: 21241136

GI number: 21241136

Start: 432510

End: 433493

Strand: Reverse

Name: pobB [H]

Synonym: XAC0362

Alternate gene names: 21241136

Gene position: 433493-432510 (Counterclockwise)

Preceding gene: 21241137

Following gene: 21241135

Centisome position: 8.38

GC content: 66.16

Gene sequence:

>984_bases
ATGCGTAAAGACACCCAGTGGCATCGCGCCCGCGTCGTCAGCATTGCCGATGCCTGCCCGGGCGTGCGCGAAATCGTGCT
CGATCCCGGCAGCGCCGCACGCGGCTTCGAGGTGGGCAGCCATGTGGATTTCCGTGTGCAGTTGCATGGTCGCGACGATA
TGCGCTCGTATTCGTTGGTGGGCGAACCGCGCGCCGATGGCTACTACCAGATCGCAGTGCGGCAGATGCCCGACAGCCGC
GGCGGCTCGTTGCATATGTGGACGCTTGCGCCGGGCGATGTGGTGGAGATGTCGCCGCCCAGCAACAACTTCGCGCTGGA
TGAAAGCGGCGAGGAAATCCTGCTCATCGCCGGCGGTATCGGCATTACACCCATCATCGGCATGGCGCAGCGGCTGGCGC
GTCGCCATCGCGCGTTTCGTCTGCTGTACGCCGGCCGCTCGCGCAGCGCGATGGCGTATGTCGACACGCTGGAAGCACTG
CTGGGCGAACGTTTGCAATTGCAATGCGACGACAGCGCCGGCCCGCCGGATCTGGCTGCCGAACTGGCGCGCCTGTCGCC
CAATGCCGAGGTGTATGTGTGCGGGCCGCTGGGCATGCTTGAAACGGTGCGCCAGCACTGGCACGCCGCCGGCCGGCCGC
GTGCGCGCCTGCACTTCGAAACCTTCGGCAATAGCGGGCGGGTGCCTGCGCAGGCGTTCGTGGTGAAGTTGCCGGGGCTG
GGCCTGGAAGTGCCGGTAGCTGAAAACGAATCGATGCTGGACGCATTGGCCGATGCCGGGGTGGAGCTGATCGCCGAGTG
TCGCCGTGGCGAATGCGGCCTGTGTGCAGTGGAGGTGCTGGACAGCTCCGCCGATATCGATCACCGCGACGTGTTCCTCA
GCGACGAGCAGCGCCGGGAGAATCGCAAGCTCTGTGCCTGCGTGTCGCGTGCGGTAGGCGGCAGCATCAGCATCGACACC
GGCTATCGCAGCGAGCTGGGCTGA

Upstream 100 bases:

>100_bases
GCACGTCGCATGCGGACCGCCATGTCATCGATCACGGCGACGCATTGCAGCGCCGTCACAGCTGGCGCCTGCCGGCAGAC
CTCATTGCCTGGAGCCCTTC

Downstream 100 bases:

>100_bases
GTCCGCATCCGGCCGGCTGCACTCGTCGGGGCGACGGCGCGGCGGATGTCTGGACCCGGCATGTGCGGCTCCTACACTAC
CGCTGCGGCGTGCCGATCTT

Product: phenoxybenzoate dioxygenase beta subunit

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRKDTQWHRARVVSIADACPGVREIVLDPGSAARGFEVGSHVDFRVQLHGRDDMRSYSLVGEPRADGYYQIAVRQMPDSR
GGSLHMWTLAPGDVVEMSPPSNNFALDESGEEILLIAGGIGITPIIGMAQRLARRHRAFRLLYAGRSRSAMAYVDTLEAL
LGERLQLQCDDSAGPPDLAAELARLSPNAEVYVCGPLGMLETVRQHWHAAGRPRARLHFETFGNSGRVPAQAFVVKLPGL
GLEVPVAENESMLDALADAGVELIAECRRGECGLCAVEVLDSSADIDHRDVFLSDEQRRENRKLCACVSRAVGGSISIDT
GYRSELG

Sequences:

>Translated_327_residues
MRKDTQWHRARVVSIADACPGVREIVLDPGSAARGFEVGSHVDFRVQLHGRDDMRSYSLVGEPRADGYYQIAVRQMPDSR
GGSLHMWTLAPGDVVEMSPPSNNFALDESGEEILLIAGGIGITPIIGMAQRLARRHRAFRLLYAGRSRSAMAYVDTLEAL
LGERLQLQCDDSAGPPDLAAELARLSPNAEVYVCGPLGMLETVRQHWHAAGRPRARLHFETFGNSGRVPAQAFVVKLPGL
GLEVPVAENESMLDALADAGVELIAECRRGECGLCAVEVLDSSADIDHRDVFLSDEQRRENRKLCACVSRAVGGSISIDT
GYRSELG
>Mature_327_residues
MRKDTQWHRARVVSIADACPGVREIVLDPGSAARGFEVGSHVDFRVQLHGRDDMRSYSLVGEPRADGYYQIAVRQMPDSR
GGSLHMWTLAPGDVVEMSPPSNNFALDESGEEILLIAGGIGITPIIGMAQRLARRHRAFRLLYAGRSRSAMAYVDTLEAL
LGERLQLQCDDSAGPPDLAAELARLSPNAEVYVCGPLGMLETVRQHWHAAGRPRARLHFETFGNSGRVPAQAFVVKLPGL
GLEVPVAENESMLDALADAGVELIAECRRGECGLCAVEVLDSSADIDHRDVFLSDEQRRENRKLCACVSRAVGGSISIDT
GYRSELG

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=326, Percent_Identity=34.0490797546012, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1787658, Length=288, Percent_Identity=26.3888888888889, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787098, Length=275, Percent_Identity=26.1818181818182, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788903, Length=240, Percent_Identity=25.8333333333333, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35575; Mature: 35575

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDTQWHRARVVSIADACPGVREIVLDPGSAARGFEVGSHVDFRVQLHGRDDMRSYSLV
CCCCCCHHHHEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEC
GEPRADGYYQIAVRQMPDSRGGSLHMWTLAPGDVVEMSPPSNNFALDESGEEILLIAGGI
CCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCEEEEEECCC
GITPIIGMAQRLARRHRAFRLLYAGRSRSAMAYVDTLEALLGERLQLQCDDSAGPPDLAA
CHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH
ELARLSPNAEVYVCGPLGMLETVRQHWHAAGRPRARLHFETFGNSGRVPAQAFVVKLPGL
HHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEECCCC
GLEVPVAENESMLDALADAGVELIAECRRGECGLCAVEVLDSSADIDHRDVFLSDEQRRE
CEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCHHHHH
NRKLCACVSRAVGGSISIDTGYRSELG
HHHHHHHHHHHCCCEEEECCCCCCCCC
>Mature Secondary Structure
MRKDTQWHRARVVSIADACPGVREIVLDPGSAARGFEVGSHVDFRVQLHGRDDMRSYSLV
CCCCCCHHHHEEEEHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEC
GEPRADGYYQIAVRQMPDSRGGSLHMWTLAPGDVVEMSPPSNNFALDESGEEILLIAGGI
CCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEECCCCCCEEECCCCCEEEEEECCC
GITPIIGMAQRLARRHRAFRLLYAGRSRSAMAYVDTLEALLGERLQLQCDDSAGPPDLAA
CHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH
ELARLSPNAEVYVCGPLGMLETVRQHWHAAGRPRARLHFETFGNSGRVPAQAFVVKLPGL
HHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEECCCC
GLEVPVAENESMLDALADAGVELIAECRRGECGLCAVEVLDSSADIDHRDVFLSDEQRRE
CEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCHHHHH
NRKLCACVSRAVGGSISIDTGYRSELG
HHHHHHHHHHHCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]