| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is yieG [C]
Identifier: 21241083
GI number: 21241083
Start: 369343
End: 370656
Strand: Reverse
Name: yieG [C]
Synonym: XAC0309
Alternate gene names: 21241083
Gene position: 370656-369343 (Counterclockwise)
Preceding gene: 21241084
Following gene: 77748521
Centisome position: 7.16
GC content: 67.81
Gene sequence:
>1314_bases ATGCGCTGGCCCGGTTTTGCGCTTGCCGCCAACGGCAGCACCGTGCGCACCGAAATGCTGGCCGGTGCCACCACCTTCCT GACCATGGCGTACATCGTCTTCGTCAACCCCGACATCCTGGCCACCACCGGCATGGATCACGGCGCGGTGTTCGTGGCTA CCTGCCTGGCTGCAGCACTGGGTTCGCTGTTGATGGGAGTGCTGGCCAACTATCCCATCGGCATGGCGCCCGGCATGGGC TTGAACGCGTTCTTCGCCTTCGGCGTGGTCGGCACATTGGGCTACAGCTGGCAGCAGACCCTGGGGCTGGTGTTCGTTTC CGGCTGCCTCTTTTTGCTGCTCACCGTTACCGGCGCGCGGCGCTGGTTGGTGGATGGCATTCCGACCACCTTGCGCAGCG CCATTGCGGCGGGCATCGGCTTGTTCCTGGCCTTGATCGGGCTGCAGAAGGCCGGATTGGTGGTGGCGCATCCGCAGACC TTGCTGACGTTGGGCGACTTGCACCGGCCCGAGCCGCTGCTTGCGCTGGCCGGGTTGCTGCTGATCGGCGTGCTTGAAGT GCGCCGCGTGCGGGGTGCCATGTTGCTCGGCATCCTTGCGGTGACCTGGGCAGCGCTGGCGTTGGGACTGGTGCGCTACG AAGGCGTCCTGGCGCTGCCGCCCAGCCTGGCGCCCACCGTGCTGCAGCTGGATATCGTCGGCGCCTTGCGCGGCCATGGC GGCGGCGGTGCGCTCGCTGCGGTACTGCATGTGGTGCTGGTGTTCGTGCTGGTGGAAATGTTCGACGCCACCGGCACGCT GATGGGTGTGGCGCAACGCGCCGGCCTGCTGCACACGCCCGCGCAGCGCCGCCAGTTCGACCGCGCGCTGCTTGCCGACA GTACCGTCATCCTGGCCGGCGCGCTGCTCGGCACTTCCAGTACCACCGCCTATGTGGAAAGCGCCGCCGGCGTGCAGGTG GGCGGGCGTACCGGCCTCACCGCGCTGGTGGTTGCCGCCCTATTTCTGCTCGCCCTGCTGTTCTCCCCGCTGGCCGCGAT GGTGCCGGCCTACGCCACCGCGCCAGCCCTGATCTACCTGGCCTCGGTGATGCTGCGCGAATGCACGCAGATCCAGTGGG ACGATGTGGGCGACGCGTTGCCGGCCGCCATCTGCATGCTCGCCATGCCGCTGACCTATTCCATTGCGACGGGGCTTGCG TTCGGCTTCATCACCTATGCCGCGCTCAGACTCGGCAGCGGCCGCTGGCGGGGTGTGCACCCGGCCACCTGGACCATCGC GGGCCTGTTCGTGCTGCGCTATGCGCTGGAATGA
Upstream 100 bases:
>100_bases CGTGCGTGCGCTGCCACGCACGCCGCCCCGTATCGATGAGATGTCTGCCGATGTTCCTTTGTCCTGCCGTCAACCTGCCC TGCATCGCGAGCGCATGCTG
Downstream 100 bases:
>100_bases TGCGTGCCTCACCTGTTCCAGGCCTGCTTACCGGCGCGCACATGGGTGGCCTCGGGTCGCGCTGGCAGGCAAGCTATGTG GTCGCCGGCTGTCGCACGCC
Product: xanthine/uracil permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MRWPGFALAANGSTVRTEMLAGATTFLTMAYIVFVNPDILATTGMDHGAVFVATCLAAALGSLLMGVLANYPIGMAPGMG LNAFFAFGVVGTLGYSWQQTLGLVFVSGCLFLLLTVTGARRWLVDGIPTTLRSAIAAGIGLFLALIGLQKAGLVVAHPQT LLTLGDLHRPEPLLALAGLLLIGVLEVRRVRGAMLLGILAVTWAALALGLVRYEGVLALPPSLAPTVLQLDIVGALRGHG GGGALAAVLHVVLVFVLVEMFDATGTLMGVAQRAGLLHTPAQRRQFDRALLADSTVILAGALLGTSSTTAYVESAAGVQV GGRTGLTALVVAALFLLALLFSPLAAMVPAYATAPALIYLASVMLRECTQIQWDDVGDALPAAICMLAMPLTYSIATGLA FGFITYAALRLGSGRWRGVHPATWTIAGLFVLRYALE
Sequences:
>Translated_437_residues MRWPGFALAANGSTVRTEMLAGATTFLTMAYIVFVNPDILATTGMDHGAVFVATCLAAALGSLLMGVLANYPIGMAPGMG LNAFFAFGVVGTLGYSWQQTLGLVFVSGCLFLLLTVTGARRWLVDGIPTTLRSAIAAGIGLFLALIGLQKAGLVVAHPQT LLTLGDLHRPEPLLALAGLLLIGVLEVRRVRGAMLLGILAVTWAALALGLVRYEGVLALPPSLAPTVLQLDIVGALRGHG GGGALAAVLHVVLVFVLVEMFDATGTLMGVAQRAGLLHTPAQRRQFDRALLADSTVILAGALLGTSSTTAYVESAAGVQV GGRTGLTALVVAALFLLALLFSPLAAMVPAYATAPALIYLASVMLRECTQIQWDDVGDALPAAICMLAMPLTYSIATGLA FGFITYAALRLGSGRWRGVHPATWTIAGLFVLRYALE >Mature_437_residues MRWPGFALAANGSTVRTEMLAGATTFLTMAYIVFVNPDILATTGMDHGAVFVATCLAAALGSLLMGVLANYPIGMAPGMG LNAFFAFGVVGTLGYSWQQTLGLVFVSGCLFLLLTVTGARRWLVDGIPTTLRSAIAAGIGLFLALIGLQKAGLVVAHPQT LLTLGDLHRPEPLLALAGLLLIGVLEVRRVRGAMLLGILAVTWAALALGLVRYEGVLALPPSLAPTVLQLDIVGALRGHG GGGALAAVLHVVLVFVLVEMFDATGTLMGVAQRAGLLHTPAQRRQFDRALLADSTVILAGALLGTSSTTAYVESAAGVQV GGRTGLTALVVAALFLLALLFSPLAAMVPAYATAPALIYLASVMLRECTQIQWDDVGDALPAAICMLAMPLTYSIATGLA FGFITYAALRLGSGRWRGVHPATWTIAGLFVLRYALE
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=431, Percent_Identity=45.0116009280742, Blast_Score=378, Evalue=1e-106, Organism=Escherichia coli, GI1790150, Length=429, Percent_Identity=45.4545454545455, Blast_Score=364, Evalue=1e-102, Organism=Escherichia coli, GI1790499, Length=438, Percent_Identity=40.6392694063927, Blast_Score=254, Evalue=6e-69, Organism=Escherichia coli, GI48994909, Length=437, Percent_Identity=40.045766590389, Blast_Score=253, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45376; Mature: 45376
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWPGFALAANGSTVRTEMLAGATTFLTMAYIVFVNPDILATTGMDHGAVFVATCLAAAL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH GSLLMGVLANYPIGMAPGMGLNAFFAFGVVGTLGYSWQQTLGLVFVSGCLFLLLTVTGAR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH RWLVDGIPTTLRSAIAAGIGLFLALIGLQKAGLVVAHPQTLLTLGDLHRPEPLLALAGLL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCHHHHHHHHH LIGVLEVRRVRGAMLLGILAVTWAALALGLVRYEGVLALPPSLAPTVLQLDIVGALRGHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHCCC GGGALAAVLHVVLVFVLVEMFDATGTLMGVAQRAGLLHTPAQRRQFDRALLADSTVILAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH ALLGTSSTTAYVESAAGVQVGGRTGLTALVVAALFLLALLFSPLAAMVPAYATAPALIYL HHHCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVMLRECTQIQWDDVGDALPAAICMLAMPLTYSIATGLAFGFITYAALRLGSGRWRGVH HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PATWTIAGLFVLRYALE CHHHHHHHHHHHHHHCC >Mature Secondary Structure MRWPGFALAANGSTVRTEMLAGATTFLTMAYIVFVNPDILATTGMDHGAVFVATCLAAAL CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH GSLLMGVLANYPIGMAPGMGLNAFFAFGVVGTLGYSWQQTLGLVFVSGCLFLLLTVTGAR HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH RWLVDGIPTTLRSAIAAGIGLFLALIGLQKAGLVVAHPQTLLTLGDLHRPEPLLALAGLL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCCCCHHHHHHHHH LIGVLEVRRVRGAMLLGILAVTWAALALGLVRYEGVLALPPSLAPTVLQLDIVGALRGHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHCCC GGGALAAVLHVVLVFVLVEMFDATGTLMGVAQRAGLLHTPAQRRQFDRALLADSTVILAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH ALLGTSSTTAYVESAAGVQVGGRTGLTALVVAALFLLALLFSPLAAMVPAYATAPALIYL HHHCCCCHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASVMLRECTQIQWDDVGDALPAAICMLAMPLTYSIATGLAFGFITYAALRLGSGRWRGVH HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PATWTIAGLFVLRYALE CHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]