| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241042
Identifier: 21241042
GI number: 21241042
Start: 322074
End: 322601
Strand: Direct
Name: 21241042
Synonym: XAC0268
Alternate gene names: NA
Gene position: 322074-322601 (Clockwise)
Preceding gene: 21241041
Following gene: 21241047
Centisome position: 6.22
GC content: 68.56
Gene sequence:
>528_bases TTGAGGCTGAGCGCCCCGGCGTACTGCACGCTCTATCGCGCCTTTACCCCGCGCTGGGCCGCCGAACCACTGAGCGGTGC CGGTGCGGCGCGCTCGGGCGGGCGCTTCAATCGCTTCGGCCAGCCGGCGCTCTATCTGTCGCTGCAACTGGAAACCGCCG CGTCCGAATATGCCCAGGCCGCCCCGTTCCTGCCACCGTTGACGCTGGTCAGTTACGCCGCCGATCTTCCGGCATTGGCC GATCTGCGTCTGCTCGATGCCAGCTGGGATGCGGTGTGGGCCGACTGGGCCGACGACTGGCGCAAGGCGCTGGTCAACAA GATCGAACCGGTGAGCTGGGTGCTCGGCGACCTGTTGCGCGAAGCGGAGATCCCCGGCGTGATCTTCCCCAGCATGGCGC GGCCCGAAGGCGTCAACGTGGTGCTGTTTCTGGACATGCTGCAGCCCGAGCGCGTACTCCGCGTCCTCGACGATGGCCGC CTGCCGCGCGATGGCCGCAGTTGGGGCGATCCGCCGACGGTGGTGTGA
Upstream 100 bases:
>100_bases TCCCCGCGTTCGAGTTCGCCACCTTGCTGGAAGTGGTCAAGCAGGGGCGCACCGACGATGCGCTGACCTATCTGCGCACG GTCGCCGCAGGGTCCGCCGG
Downstream 100 bases:
>100_bases CTGGGCACGCGTTGATGTGCGCGCACCACGTGCAGCGCGTCACCCGACATCGGTATCGCGAACGTCACCGCACGTGCGTG TGGCGATAACGCAATGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MRLSAPAYCTLYRAFTPRWAAEPLSGAGAARSGGRFNRFGQPALYLSLQLETAASEYAQAAPFLPPLTLVSYAADLPALA DLRLLDASWDAVWADWADDWRKALVNKIEPVSWVLGDLLREAEIPGVIFPSMARPEGVNVVLFLDMLQPERVLRVLDDGR LPRDGRSWGDPPTVV
Sequences:
>Translated_175_residues MRLSAPAYCTLYRAFTPRWAAEPLSGAGAARSGGRFNRFGQPALYLSLQLETAASEYAQAAPFLPPLTLVSYAADLPALA DLRLLDASWDAVWADWADDWRKALVNKIEPVSWVLGDLLREAEIPGVIFPSMARPEGVNVVLFLDMLQPERVLRVLDDGR LPRDGRSWGDPPTVV >Mature_175_residues MRLSAPAYCTLYRAFTPRWAAEPLSGAGAARSGGRFNRFGQPALYLSLQLETAASEYAQAAPFLPPLTLVSYAADLPALA DLRLLDASWDAVWADWADDWRKALVNKIEPVSWVLGDLLREAEIPGVIFPSMARPEGVNVVLFLDMLQPERVLRVLDDGR LPRDGRSWGDPPTVV
Specific function: Unknown
COG id: COG5654
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19292; Mature: 19292
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSAPAYCTLYRAFTPRWAAEPLSGAGAARSGGRFNRFGQPALYLSLQLETAASEYAQA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHH APFLPPLTLVSYAADLPALADLRLLDASWDAVWADWADDWRKALVNKIEPVSWVLGDLLR CCCCCHHHHHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EAEIPGVIFPSMARPEGVNVVLFLDMLQPERVLRVLDDGRLPRDGRSWGDPPTVV HHCCCCEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLSAPAYCTLYRAFTPRWAAEPLSGAGAARSGGRFNRFGQPALYLSLQLETAASEYAQA CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHH APFLPPLTLVSYAADLPALADLRLLDASWDAVWADWADDWRKALVNKIEPVSWVLGDLLR CCCCCHHHHHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EAEIPGVIFPSMARPEGVNVVLFLDMLQPERVLRVLDDGRLPRDGRSWGDPPTVV HHCCCCEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA