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The map label for this gene is 21241047

Identifier: 21241047

GI number: 21241047

Start: 326288

End: 326806

Strand: Direct

Name: 21241047

Synonym: XAC0273

Alternate gene names: NA

Gene position: 326288-326806 (Clockwise)

Preceding gene: 21241042

Following gene: 21241048

Centisome position: 6.3

GC content: 64.55

Gene sequence:

>519_bases
GTGCGGAATTACGACCTCGAGTTCCTGAAAAAATTCTCGATGGTGATCGGTTTACTCGTGGTGATCACCCTGGGCCTGAT
CGCCCTGGCAGCGTATTTGCAACGCGCCATCCCCGACGAAGTCTCGCCCACCGCCGCCAAACGCGTGCTGCAACGCATTG
CGCCTGCCGGCGCGGTCTACGCCGGTGCGACTGGCGCGTCCGCACAGGCCGCAGCGCAGGCCGCCGCGCTGGCCAAGGCC
GCCTCGCAGTCTGCGTACGGCGGTACGACCGACGGCAAGACCATCTTCAACAACCTGTGCACCGCCTGCCACACCACCGG
TGTCGGCAAGGCGCCCACGTTGGACCATTCGCATTGGGATGCACGCATCGCCCAGGGCAAGGACACCTTGTACAAGCACG
CGATCGAGGGCTATACCGGTCCGGATGGCGGCATCATGCCTCCCAAGGGCGGCAACCCGGCACTGACCGAAGAGCAGGTG
CGGGCCACCGTCGATTGGATGCTGGGCAACCTCAAGTAA

Upstream 100 bases:

>100_bases
CGCTGCGAAAACTGTCATGCAGGCTGGTCAGACTGGCGCAAAGTGTGCTCTATACTCCGGCGCTAGCAGAGGTCTTCGAC
CAACAGCCAGGGGTGAGCGC

Downstream 100 bases:

>100_bases
GAGCTTGGCAAGTTGCCGGGGAAGATGGGTCTGCGATTCGCGCCCGATACAGCCTATCGCCTGCGTTGCGTTGCTCATGG
AGCGCGTCGCGGGCAGATCG

Product: cytochrome C5

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRNYDLEFLKKFSMVIGLLVVITLGLIALAAYLQRAIPDEVSPTAAKRVLQRIAPAGAVYAGATGASAQAAAQAAALAKA
ASQSAYGGTTDGKTIFNNLCTACHTTGVGKAPTLDHSHWDARIAQGKDTLYKHAIEGYTGPDGGIMPPKGGNPALTEEQV
RATVDWMLGNLK

Sequences:

>Translated_172_residues
MRNYDLEFLKKFSMVIGLLVVITLGLIALAAYLQRAIPDEVSPTAAKRVLQRIAPAGAVYAGATGASAQAAAQAAALAKA
ASQSAYGGTTDGKTIFNNLCTACHTTGVGKAPTLDHSHWDARIAQGKDTLYKHAIEGYTGPDGGIMPPKGGNPALTEEQV
RATVDWMLGNLK
>Mature_172_residues
MRNYDLEFLKKFSMVIGLLVVITLGLIALAAYLQRAIPDEVSPTAAKRVLQRIAPAGAVYAGATGASAQAAAQAAALAKA
ASQSAYGGTTDGKTIFNNLCTACHTTGVGKAPTLDHSHWDARIAQGKDTLYKHAIEGYTGPDGGIMPPKGGNPALTEEQV
RATVDWMLGNLK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 17939; Mature: 17939

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYDLEFLKKFSMVIGLLVVITLGLIALAAYLQRAIPDEVSPTAAKRVLQRIAPAGAVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
AGATGASAQAAAQAAALAKAASQSAYGGTTDGKTIFNNLCTACHTTGVGKAPTLDHSHWD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
ARIAQGKDTLYKHAIEGYTGPDGGIMPPKGGNPALTEEQVRATVDWMLGNLK
HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNYDLEFLKKFSMVIGLLVVITLGLIALAAYLQRAIPDEVSPTAAKRVLQRIAPAGAVY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
AGATGASAQAAAQAAALAKAASQSAYGGTTDGKTIFNNLCTACHTTGVGKAPTLDHSHWD
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
ARIAQGKDTLYKHAIEGYTGPDGGIMPPKGGNPALTEEQVRATVDWMLGNLK
HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]