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The map label for this gene is yxjL [H]

Identifier: 21240910

GI number: 21240910

Start: 159958

End: 160590

Strand: Direct

Name: yxjL [H]

Synonym: XAC0136

Alternate gene names: 21240910

Gene position: 159958-160590 (Clockwise)

Preceding gene: 21240909

Following gene: 21240912

Centisome position: 3.09

GC content: 69.67

Gene sequence:

>633_bases
ATGAGTTCACGTCGTATTGCCCTGGCCGACGACCAGATCCTGGTGCGCGCCGGCCTGCGCGCGTTGCTGCAGCAGCAGGG
CGTGGAGGTGGTGTGCGAGGCCGACGACGGCCAGGGCCTGCTGGATGCGCTCGCCATCCACACGGTGGACGTGGTGCTCA
GCGACATCCGGATGCCCGGCCTGGACGGCATCCAGGCACTGGAGCACCTGCGCGCCCGCGGCGACCGCACCCCGGTGCTG
CTGCTCACCACCTTCGACGACAGCGACCTGCTGCTACGCGCCAGCGAGGCCGGCGCGCAGGGCTTCCTGCTCAAGGACGC
CGCCCCGGAAGACCTGCGCGAGGCGATCGAGCGCGTCGCCGCAGGCGACACCCTGCTGCAGCCGGTCAGCACCGACCCGG
TGCGCGCCCGCTACCAGTTCCGCGACCAGCAGGCCCCGCGCGAGACCTTCAGCGAGCGCGAGGTGGCGATCCTGCGCCTG
CTGGCCGGCGGCTATTCCAACAAGGAAATCGCCCGCACCCTGTTCCTGGCCGAAGGCACGGTGAAGAACTACGTCTCCAC
CATCCTGGAAAAGCTGGGCATCCGCGACCGCACGCGGGCGGTCTTGAAGGCGATCACGTTGCGGGTGATTTGA

Upstream 100 bases:

>100_bases
GCATTACCGGCATGCGCGAACGCCTGGCCGCACTGCACGGCCAGCTGGACCTTGGCCGCACACCCACGGGCGGCATGCAT
CTGATCGCGAGACTACCGGT

Downstream 100 bases:

>100_bases
GGGTGGGCAATCGGGAATCGGGAATCGGGAATCGGAAGAGCGGGCGGTTGGGCAGTTTGGACCGGATCAGAAAGCCCTAG
AGCAAGGGGGAACCTAAAGC

Product: two-component system regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSSRRIALADDQILVRAGLRALLQQQGVEVVCEADDGQGLLDALAIHTVDVVLSDIRMPGLDGIQALEHLRARGDRTPVL
LLTTFDDSDLLLRASEAGAQGFLLKDAAPEDLREAIERVAAGDTLLQPVSTDPVRARYQFRDQQAPRETFSEREVAILRL
LAGGYSNKEIARTLFLAEGTVKNYVSTILEKLGIRDRTRAVLKAITLRVI

Sequences:

>Translated_210_residues
MSSRRIALADDQILVRAGLRALLQQQGVEVVCEADDGQGLLDALAIHTVDVVLSDIRMPGLDGIQALEHLRARGDRTPVL
LLTTFDDSDLLLRASEAGAQGFLLKDAAPEDLREAIERVAAGDTLLQPVSTDPVRARYQFRDQQAPRETFSEREVAILRL
LAGGYSNKEIARTLFLAEGTVKNYVSTILEKLGIRDRTRAVLKAITLRVI
>Mature_209_residues
SSRRIALADDQILVRAGLRALLQQQGVEVVCEADDGQGLLDALAIHTVDVVLSDIRMPGLDGIQALEHLRARGDRTPVLL
LTTFDDSDLLLRASEAGAQGFLLKDAAPEDLREAIERVAAGDTLLQPVSTDPVRARYQFRDQQAPRETFSEREVAILRLL
AGGYSNKEIARTLFLAEGTVKNYVSTILEKLGIRDRTRAVLKAITLRVI

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=199, Percent_Identity=37.6884422110553, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1788222, Length=193, Percent_Identity=31.0880829015544, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1786747, Length=196, Percent_Identity=30.1020408163265, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788712, Length=185, Percent_Identity=28.6486486486486, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1787473, Length=185, Percent_Identity=33.5135135135135, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790102, Length=192, Percent_Identity=32.2916666666667, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1788550, Length=110, Percent_Identity=40, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788546, Length=203, Percent_Identity=26.6009852216749, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790299, Length=145, Percent_Identity=34.4827586206897, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=31.6239316239316, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23069; Mature: 22938

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRRIALADDQILVRAGLRALLQQQGVEVVCEADDGQGLLDALAIHTVDVVLSDIRMPG
CCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
LDGIQALEHLRARGDRTPVLLLTTFDDSDLLLRASEAGAQGFLLKDAAPEDLREAIERVA
CHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHH
AGDTLLQPVSTDPVRARYQFRDQQAPRETFSEREVAILRLLAGGYSNKEIARTLFLAEGT
CCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
VKNYVSTILEKLGIRDRTRAVLKAITLRVI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSRRIALADDQILVRAGLRALLQQQGVEVVCEADDGQGLLDALAIHTVDVVLSDIRMPG
CCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
LDGIQALEHLRARGDRTPVLLLTTFDDSDLLLRASEAGAQGFLLKDAAPEDLREAIERVA
CHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHH
AGDTLLQPVSTDPVRARYQFRDQQAPRETFSEREVAILRLLAGGYSNKEIARTLFLAEGT
CCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
VKNYVSTILEKLGIRDRTRAVLKAITLRVI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]