| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is flp [H]
Identifier: 21240908
GI number: 21240908
Start: 157496
End: 158680
Strand: Direct
Name: flp [H]
Synonym: XAC0134
Alternate gene names: 21240908
Gene position: 157496-158680 (Clockwise)
Preceding gene: 21240906
Following gene: 21240909
Centisome position: 3.04
GC content: 67.59
Gene sequence:
>1185_bases GTGCTTTGCAGTGGTCAGGCGTGGGCGGGCGGGCCGGGTCGGCCGCCCGCGCCGGACGCCATCACACGCACACTCCAGCA ACACATGGACGCCGCCGGCATCGTCGGCCTGGGCGCGGCGATCATCCGCGACCGCAAGGTGGTCTGGACCGGCGGCGTCG GTTTTGCCGACCGTGCGCGCGGCACGCCATTCACGCCCGACACCGTCATGAACATCGGCTCGATCAGCAAGACCGTGACC GGCGTGGCGCTGATGCAGGCGGTGCAGGACGGCAAGCTGGCGCTGGATGCGGACATCAACACCTATCTGCCGTTCGCCGT GCGCAACCCGCAGTTTCCGCAGGTGCCGATCACCCTGCGGCAACTGGCCACGCACACCTCCAGCCTGACCGACCGCTGGG AGGTCTACCGCGACACCTATCGCTGGCAAGGCCTGCCGGTCGCGCCGTTGGGCGACTTCTTGCGCGGCTATCTGGCGCCC GGCGGGCGCGACTACCAGGCGCAGAACTACCTGCCGGTCAAACCCGGCACGCATCGCGAATACTCCAACATCGGTGCCGG CCTGGTGGGCTACATCGTCGCGCGCGCGGTGGGCCAGTCGCTGGAGCGCTACACGCACACGCGCATCTTCGCGCCACTGG GCATGCAGCACACTGCCTGGCATGCGGCCGATCTGCCGGCCGCCGCCCAGGCCACGCTGTATGTGAGCCAGTTCGGTGTG AGCGTGCCGATCCCGCCGTACGAACTCACCACCTACCCCGACGGCGGCGTGCGCACCAGCGTCAACGACCTCTCCAGGCT GTTCATCGCCCTGCTCGATGGCGGGCAGTACCAGGGCGTGCGTATTCTGGATACCACCACCACCGCGCAGATGCTGCGTT TCCAGTACACCGCCGCCAACACGCCCGACAATGTCGCCTTGAACGAGAAGAACTCCGGCATCTTCTGGTCCACCAAGTAC AACGTCACCCGCATCGGCCACGGCGGCTCGGACCCGGGCGTGCACACCGAGATGCTGTCGGACCTGGCGCACGACAATGC GGTAGTGCTGATCAGCAACACCTCCTTGGACAGCAGCGATGCCAGGGTCAATGCGCAGCTCTTCGACGATCTGTGGGCGT ATGCCGTGGAGCTCAGGCAGCAAGCGGCCTCCGCTGCCGGCCGTCGCCGCCCCGCACCGGATTGA
Upstream 100 bases:
>100_bases CCCACGTGGGGCATCTGCAGCAACCACATCACGGACGGAGGGCGCCATGCGTGCAGGCACAGCAGCGGGATGGACGGTAA AGATCGGGCTGGCGATCGGT
Downstream 100 bases:
>100_bases GCGCAGCCAGCAGAACGGAAGCGGACCGGGCATGACCTGCGGCCCCGGGGTGGTGTGCCGGTGTGCGCACGCGCTGCAGC CGCGACAGGGGCCGCAGGTC
Product: beta-lactamase
Products: A Substituted Beta- Amino Acid. [C]
Alternate protein names: FmtA-like protein [H]
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLCSGQAWAGGPGRPPAPDAITRTLQQHMDAAGIVGLGAAIIRDRKVVWTGGVGFADRARGTPFTPDTVMNIGSISKTVT GVALMQAVQDGKLALDADINTYLPFAVRNPQFPQVPITLRQLATHTSSLTDRWEVYRDTYRWQGLPVAPLGDFLRGYLAP GGRDYQAQNYLPVKPGTHREYSNIGAGLVGYIVARAVGQSLERYTHTRIFAPLGMQHTAWHAADLPAAAQATLYVSQFGV SVPIPPYELTTYPDGGVRTSVNDLSRLFIALLDGGQYQGVRILDTTTTAQMLRFQYTAANTPDNVALNEKNSGIFWSTKY NVTRIGHGGSDPGVHTEMLSDLAHDNAVVLISNTSLDSSDARVNAQLFDDLWAYAVELRQQAASAAGRRRPAPD
Sequences:
>Translated_394_residues MLCSGQAWAGGPGRPPAPDAITRTLQQHMDAAGIVGLGAAIIRDRKVVWTGGVGFADRARGTPFTPDTVMNIGSISKTVT GVALMQAVQDGKLALDADINTYLPFAVRNPQFPQVPITLRQLATHTSSLTDRWEVYRDTYRWQGLPVAPLGDFLRGYLAP GGRDYQAQNYLPVKPGTHREYSNIGAGLVGYIVARAVGQSLERYTHTRIFAPLGMQHTAWHAADLPAAAQATLYVSQFGV SVPIPPYELTTYPDGGVRTSVNDLSRLFIALLDGGQYQGVRILDTTTTAQMLRFQYTAANTPDNVALNEKNSGIFWSTKY NVTRIGHGGSDPGVHTEMLSDLAHDNAVVLISNTSLDSSDARVNAQLFDDLWAYAVELRQQAASAAGRRRPAPD >Mature_394_residues MLCSGQAWAGGPGRPPAPDAITRTLQQHMDAAGIVGLGAAIIRDRKVVWTGGVGFADRARGTPFTPDTVMNIGSISKTVT GVALMQAVQDGKLALDADINTYLPFAVRNPQFPQVPITLRQLATHTSSLTDRWEVYRDTYRWQGLPVAPLGDFLRGYLAP GGRDYQAQNYLPVKPGTHREYSNIGAGLVGYIVARAVGQSLERYTHTRIFAPLGMQHTAWHAADLPAAAQATLYVSQFGV SVPIPPYELTTYPDGGVRTSVNDLSRLFIALLDGGQYQGVRILDTTTTAQMLRFQYTAANTPDNVALNEKNSGIFWSTKY NVTRIGHGGSDPGVHTEMLSDLAHDNAVVLISNTSLDSSDARVNAQLFDDLWAYAVELRQQAASAAGRRRPAPD
Specific function: Its precise function is unknown. Has no penicillin- binding activity and is not involved in methicillin resistance [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI239747261, Length=290, Percent_Identity=27.9310344827586, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI239752721, Length=290, Percent_Identity=27.9310344827586, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI239741085, Length=290, Percent_Identity=27.9310344827586, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI26051231, Length=130, Percent_Identity=33.0769230769231, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI26051233, Length=130, Percent_Identity=33.0769230769231, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1790593, Length=258, Percent_Identity=29.8449612403101, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1786574, Length=289, Percent_Identity=25.9515570934256, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115533026, Length=260, Percent_Identity=28.4615384615385, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17550934, Length=203, Percent_Identity=27.0935960591133, Blast_Score=78, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: 3.5.2.6 [C]
Molecular weight: Translated: 42651; Mature: 42651
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCSGQAWAGGPGRPPAPDAITRTLQQHMDAAGIVGLGAAIIRDRKVVWTGGVGFADRAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCHHCCC GTPFTPDTVMNIGSISKTVTGVALMQAVQDGKLALDADINTYLPFAVRNPQFPQVPITLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCHHHH QLATHTSSLTDRWEVYRDTYRWQGLPVAPLGDFLRGYLAPGGRDYQAQNYLPVKPGTHRE HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCC YSNIGAGLVGYIVARAVGQSLERYTHTRIFAPLGMQHTAWHAADLPAAAQATLYVSQFGV HHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHEEEHHHCCC SVPIPPYELTTYPDGGVRTSVNDLSRLFIALLDGGQYQGVRILDTTTTAQMLRFQYTAAN CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHEEEEECCC TPDNVALNEKNSGIFWSTKYNVTRIGHGGSDPGVHTEMLSDLAHDNAVVLISNTSLDSSD CCCCEEEECCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCC ARVNAQLFDDLWAYAVELRQQAASAAGRRRPAPD CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLCSGQAWAGGPGRPPAPDAITRTLQQHMDAAGIVGLGAAIIRDRKVVWTGGVGFADRAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCHHCCC GTPFTPDTVMNIGSISKTVTGVALMQAVQDGKLALDADINTYLPFAVRNPQFPQVPITLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCHHHH QLATHTSSLTDRWEVYRDTYRWQGLPVAPLGDFLRGYLAPGGRDYQAQNYLPVKPGTHRE HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCC YSNIGAGLVGYIVARAVGQSLERYTHTRIFAPLGMQHTAWHAADLPAAAQATLYVSQFGV HHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHEEEHHHCCC SVPIPPYELTTYPDGGVRTSVNDLSRLFIALLDGGQYQGVRILDTTTTAQMLRFQYTAAN CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHEEEEECCC TPDNVALNEKNSGIFWSTKYNVTRIGHGGSDPGVHTEMLSDLAHDNAVVLISNTSLDSSD CCCCEEEECCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCC ARVNAQLFDDLWAYAVELRQQAASAAGRRRPAPD CEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: A Beta-Lactam; H2O [C]
Specific reaction: A Beta-Lactam + H2O = A Substituted Beta- Amino Acid. [C]
General reaction: Carboxylic acid amide hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA