| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240889
Identifier: 21240889
GI number: 21240889
Start: 133473
End: 135839
Strand: Reverse
Name: 21240889
Synonym: XAC0115
Alternate gene names: NA
Gene position: 135839-133473 (Counterclockwise)
Preceding gene: 21240890
Following gene: 21240888
Centisome position: 2.62
GC content: 74.36
Gene sequence:
>2367_bases GTGGCCGCTGGCGCCGTGGCTAATCGGCCTGGTGCTGCTGCTGTTCGCGCTCGAACGCTGGCTGGCCACCGCGCCGCGCC GGTCCACTCCCGCATGAGCACGCCGGCACTGCAGCGGGCGTGGCAGGCGGCACGGCGGCGACAGGCCGCAGGCGTGCTGC TGTTCGGACTGCCGCTGGCGGCGGTGCCGGCGGCGCTGGCGTGGCGCGCCGGTGCGCAGGCAGCCGTGGTGGCGCTGCTG CTGGGCCTGCTGGCGTTGGGCGGCGTGGCCCTGCTGGCCGCGCGGCGGCTCGACCAGAGCTGGCTGATCCACCGGCTGGA TCGCGATGCAGATCTGGAAGACAGCAGCGATTTGCTGTTCGCCCCGGCCACCCGGCTCGGTCCGCTGCAGACCCTGCAAC GGCAACGGCTGGAGCAGCGCCTGCGCAGCAGCCCGCGCGACCTGCGCCCGGCCTGGCCGTGGCGCCGCGCCTGGCCCTGG AGCGTGCTGGGCGTGCTCGCCTGTGGCGCGCTGCTGCTGTGGCCACAACCGGCCACCCACCGCACCCCGCCAACCGACCG CGTGGCCGCCGCGCGTGCCAGCAGCGGCGCGCCCACGCTGCGGCAGGCGCAGCTGCGCAGCAGCCCGCCGGCCTACACCG GTCTGCCCGCCGCGCGCCTGCCCGGCCTGGATGCGAAAGTGCCGGCCGGCACCCGGCTGGACTGGCAACTGCAGGTCGGC CCTGCGCCGCGCAGCGTGGCCGTGCGGCTCACCGACGGCAGCACCGTCGCGCTGGCCCGGCAAGGCCGTGGCGATATCTG GCAAGGCCACTGGGTCGCCGAGCGCGCCAGCCTGTACCGCATCCTCATCGACGGCGCGCCGGCCGACCGCCAGCTGCATC GACTGGACGTGCTGCCCGACCGCCCACCGCAGGTGCGCGTGCTCGCGCCCGAGCAGAGCCTGGTGCTGTGGTCCCCGGCC GCCCGCACCTGGACGCTGCGCTTCGAGGCCAGCGACGACTACGCGGTGGCCACCAACGCCGAGCTGCGCCTCACTCTGGC CCAGGGCAGCGGCGAAAACATCACCTTCAGGACCCAGCGCCGCACGCTGACCGGCAGTGGCCCGGCCAGGCAACGCGGCT TCGCCATCACCCTGGAGCCGCACGCGCTGGGCATGGCCGCGGGCGACGACCTGATTGCCCAGCTCATCGTCCACGACACC CGCCAGCCCGGCCCGCAGGAAGGCCGCAGCGCCAGCGTGATCCTGCGCTGGCCGCCGCCCGAACAAACCATGGCCGCCGG CCTGGAAGCCAGTGTCAAGCAGACCTTGCCGGCCTACTTCCGCAGCCAGCGCCAGATCATCATCGACGCCGAGGCGCTGC TGAAGGAGAAACCGCGCCTGGAGGCGGCCACCTTCCTCAAGCGCTCGGACGCCATCGGCGTGGACCAGCGCCTGCTGCGG CTGCGCTACGGCCAGTTCCTGGGCGAAGAAAGCGAGGGCGCGCCGCAAGGGCCGCCGACTGCCGACGCGCCGCCCACCAG CGACGCCCCGGCCGACGATTTGCCCACCGCCGACATGCCCACAGCCGATGCGCCAAGCGCACCCGGCGCTGCTTCGGACA CGCACGCCGGGCATGACCACGACGATCACGCTCATGACGCCCACGCCGCCACACCCGGCGCTGCCGCACTGGACGACGAC CACGACCACGATCACGGCGGCAGCAACGGCCGGCCCGAGCGCAGCAGCTTCGGCCAGGCGGAAAACGTACTGGCCGAATT CGGCCATACCCACGACCACGCCGAAGCCGCCACCCTGCTCGACCCGCAGACCCGCGCCCTGCTGCGCGCCGCGCTGGACC AGATGTGGCAATCCGAAGGCGAGCTGCGCCAGGGCCACCCGGAGCGCGCGCTGCCGTACGCCAACAAGGCGCTGGGCTTC ATCAAGCAGGTGCAGCAGGCCGAACGCATCTACCTGGCGCGCGTGGGCACGCAATTGCCGCCGATCGACCCCAGCCGCCG GCTGAGCGGCGATCGCACCGGCCTGGGCGACCGCGCCGCCGGGCTGGACACCCGCCCGGACCCGGACCCGTCCGCGCTGC AGCTGTGGGATGCGTTGGGCGAGGCAGCCCCCGTGTCCGACGCCACCCTGGCCCGTTACGCGCAGTGGCTGCAGACCCAG CAAGACCGCCTGCACGACCCGCTGGGCCTGGCCGCCGCCGTGGAAACCCTGCGCGCCGAACCCGATTGCGCCCGTTGCCG CGCCCAGCTGCGCGCCCAGGTCTGGCGCACCCTGCTCGCCCCGCCGGCAGCACCACACCGCCGCGCCGCGCCCGACCCGC GCGGCCAGCGCTACCTGGATGCGCTGCGGCAGGAGATGCAGCCGTGA
Upstream 100 bases:
>100_bases GCCTGCACGACGCCCTGCAGCCGCTGCCCACACCGCAGCGCGCGCTGGCACAGACCCAGCAACCGCAACGCGGTGCCGCC AGCCGCCTGACGACGGCGCC
Downstream 100 bases:
>100_bases GTCCCACCCCGATCCGCCTTCTTCCGGTGCAGCGGTCGTTCGGACCGACGGTGTCTGTAGACCTGGCAGCAAGCGGTCCG CTGTCGTGCGCAAGGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 788; Mature: 787
Protein sequence:
>788_residues MAAGAVANRPGAAAVRARTLAGHRAAPVHSRMSTPALQRAWQAARRRQAAGVLLFGLPLAAVPAALAWRAGAQAAVVALL LGLLALGGVALLAARRLDQSWLIHRLDRDADLEDSSDLLFAPATRLGPLQTLQRQRLEQRLRSSPRDLRPAWPWRRAWPW SVLGVLACGALLLWPQPATHRTPPTDRVAAARASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVG PAPRSVAVRLTDGSTVALARQGRGDIWQGHWVAERASLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPA ARTWTLRFEASDDYAVATNAELRLTLAQGSGENITFRTQRRTLTGSGPARQRGFAITLEPHALGMAAGDDLIAQLIVHDT RQPGPQEGRSASVILRWPPPEQTMAAGLEASVKQTLPAYFRSQRQIIIDAEALLKEKPRLEAATFLKRSDAIGVDQRLLR LRYGQFLGEESEGAPQGPPTADAPPTSDAPADDLPTADMPTADAPSAPGAASDTHAGHDHDDHAHDAHAATPGAAALDDD HDHDHGGSNGRPERSSFGQAENVLAEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGF IKQVQQAERIYLARVGTQLPPIDPSRRLSGDRTGLGDRAAGLDTRPDPDPSALQLWDALGEAAPVSDATLARYAQWLQTQ QDRLHDPLGLAAAVETLRAEPDCARCRAQLRAQVWRTLLAPPAAPHRRAAPDPRGQRYLDALRQEMQP
Sequences:
>Translated_788_residues MAAGAVANRPGAAAVRARTLAGHRAAPVHSRMSTPALQRAWQAARRRQAAGVLLFGLPLAAVPAALAWRAGAQAAVVALL LGLLALGGVALLAARRLDQSWLIHRLDRDADLEDSSDLLFAPATRLGPLQTLQRQRLEQRLRSSPRDLRPAWPWRRAWPW SVLGVLACGALLLWPQPATHRTPPTDRVAAARASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVG PAPRSVAVRLTDGSTVALARQGRGDIWQGHWVAERASLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPA ARTWTLRFEASDDYAVATNAELRLTLAQGSGENITFRTQRRTLTGSGPARQRGFAITLEPHALGMAAGDDLIAQLIVHDT RQPGPQEGRSASVILRWPPPEQTMAAGLEASVKQTLPAYFRSQRQIIIDAEALLKEKPRLEAATFLKRSDAIGVDQRLLR LRYGQFLGEESEGAPQGPPTADAPPTSDAPADDLPTADMPTADAPSAPGAASDTHAGHDHDDHAHDAHAATPGAAALDDD HDHDHGGSNGRPERSSFGQAENVLAEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGF IKQVQQAERIYLARVGTQLPPIDPSRRLSGDRTGLGDRAAGLDTRPDPDPSALQLWDALGEAAPVSDATLARYAQWLQTQ QDRLHDPLGLAAAVETLRAEPDCARCRAQLRAQVWRTLLAPPAAPHRRAAPDPRGQRYLDALRQEMQP >Mature_787_residues AAGAVANRPGAAAVRARTLAGHRAAPVHSRMSTPALQRAWQAARRRQAAGVLLFGLPLAAVPAALAWRAGAQAAVVALLL GLLALGGVALLAARRLDQSWLIHRLDRDADLEDSSDLLFAPATRLGPLQTLQRQRLEQRLRSSPRDLRPAWPWRRAWPWS VLGVLACGALLLWPQPATHRTPPTDRVAAARASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVGP APRSVAVRLTDGSTVALARQGRGDIWQGHWVAERASLYRILIDGAPADRQLHRLDVLPDRPPQVRVLAPEQSLVLWSPAA RTWTLRFEASDDYAVATNAELRLTLAQGSGENITFRTQRRTLTGSGPARQRGFAITLEPHALGMAAGDDLIAQLIVHDTR QPGPQEGRSASVILRWPPPEQTMAAGLEASVKQTLPAYFRSQRQIIIDAEALLKEKPRLEAATFLKRSDAIGVDQRLLRL RYGQFLGEESEGAPQGPPTADAPPTSDAPADDLPTADMPTADAPSAPGAASDTHAGHDHDDHAHDAHAATPGAAALDDDH DHDHGGSNGRPERSSFGQAENVLAEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFI KQVQQAERIYLARVGTQLPPIDPSRRLSGDRTGLGDRAAGLDTRPDPDPSALQLWDALGEAAPVSDATLARYAQWLQTQQ DRLHDPLGLAAAVETLRAEPDCARCRAQLRAQVWRTLLAPPAAPHRRAAPDPRGQRYLDALRQEMQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85128; Mature: 84997
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGAVANRPGAAAVRARTLAGHRAAPVHSRMSTPALQRAWQAARRRQAAGVLLFGLPLA CCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCHH AVPAALAWRAGAQAAVVALLLGLLALGGVALLAARRLDQSWLIHRLDRDADLEDSSDLLF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEE APATRLGPLQTLQRQRLEQRLRSSPRDLRPAWPWRRAWPWSVLGVLACGALLLWPQPATH ECCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCC RTPPTDRVAAARASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVG CCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEC PAPRSVAVRLTDGSTVALARQGRGDIWQGHWVAERASLYRILIDGAPADRQLHRLDVLPD CCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHEEEEEECCCCCCCHHHHCCCCCC RPPQVRVLAPEQSLVLWSPAARTWTLRFEASDDYAVATNAELRLTLAQGSGENITFRTQR CCCCEEEECCCCCEEEECCCCEEEEEEEECCCCEEEEECCEEEEEEECCCCCCEEEEEEC RTLTGSGPARQRGFAITLEPHALGMAAGDDLIAQLIVHDTRQPGPQEGRSASVILRWPPP CEECCCCCCHHCCEEEEECCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC EQTMAAGLEASVKQTLPAYFRSQRQIIIDAEALLKEKPRLEAATFLKRSDAIGVDQRLLR HHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH LRYGQFLGEESEGAPQGPPTADAPPTSDAPADDLPTADMPTADAPSAPGAASDTHAGHDH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDHAHDAHAATPGAAALDDDHDHDHGGSNGRPERSSFGQAENVLAEFGHTHDHAEAATLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHC DPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAERIYLARVGTQLP CHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIDPSRRLSGDRTGLGDRAAGLDTRPDPDPSALQLWDALGEAAPVSDATLARYAQWLQTQ CCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QDRLHDPLGLAAAVETLRAEPDCARCRAQLRAQVWRTLLAPPAAPHRRAAPDPRGQRYLD HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH ALRQEMQP HHHHHCCC >Mature Secondary Structure AAGAVANRPGAAAVRARTLAGHRAAPVHSRMSTPALQRAWQAARRRQAAGVLLFGLPLA CCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCHH AVPAALAWRAGAQAAVVALLLGLLALGGVALLAARRLDQSWLIHRLDRDADLEDSSDLLF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEE APATRLGPLQTLQRQRLEQRLRSSPRDLRPAWPWRRAWPWSVLGVLACGALLLWPQPATH ECCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCC RTPPTDRVAAARASSGAPTLRQAQLRSSPPAYTGLPAARLPGLDAKVPAGTRLDWQLQVG CCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEC PAPRSVAVRLTDGSTVALARQGRGDIWQGHWVAERASLYRILIDGAPADRQLHRLDVLPD CCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHEEEEEECCCCCCCHHHHCCCCCC RPPQVRVLAPEQSLVLWSPAARTWTLRFEASDDYAVATNAELRLTLAQGSGENITFRTQR CCCCEEEECCCCCEEEECCCCEEEEEEEECCCCEEEEECCEEEEEEECCCCCCEEEEEEC RTLTGSGPARQRGFAITLEPHALGMAAGDDLIAQLIVHDTRQPGPQEGRSASVILRWPPP CEECCCCCCHHCCEEEEECCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCC EQTMAAGLEASVKQTLPAYFRSQRQIIIDAEALLKEKPRLEAATFLKRSDAIGVDQRLLR HHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHH LRYGQFLGEESEGAPQGPPTADAPPTSDAPADDLPTADMPTADAPSAPGAASDTHAGHDH HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDHAHDAHAATPGAAALDDDHDHDHGGSNGRPERSSFGQAENVLAEFGHTHDHAEAATLL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHC DPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAERIYLARVGTQLP CHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC PIDPSRRLSGDRTGLGDRAAGLDTRPDPDPSALQLWDALGEAAPVSDATLARYAQWLQTQ CCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QDRLHDPLGLAAAVETLRAEPDCARCRAQLRAQVWRTLLAPPAAPHRRAAPDPRGQRYLD HHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH ALRQEMQP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA