| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240890
Identifier: 21240890
GI number: 21240890
Start: 135743
End: 136942
Strand: Reverse
Name: 21240890
Synonym: XAC0116
Alternate gene names: NA
Gene position: 136942-135743 (Counterclockwise)
Preceding gene: 21240891
Following gene: 21240889
Centisome position: 2.65
GC content: 73.42
Gene sequence:
>1200_bases ATGAACTTGCTGTTGCTTTTCCCCGCCGGCCTGGCGGCGTTGGCCGCGTTGCTGCTGCCGCTGCTGATCCATCTGGCCCG GCGCAGCGAACACCGGCCGACCGACTTCGCCGCGTTGCGCTGGTTGCGTGCGCTGCCGCGCCCACGCCACCACGTGCGCT TGGACGAATGGCCGCTGCTGCTGGTGCGCTTGCTGCTGCTCGCTGCCGTGGCGCTGCTGCTGGCCGAGCCGGCCGTGCGC GGCCATGACGATGCACGCCCACGCATTGCGCTCAGCCCGGGGGTGGATGTGGCCGCCGCACGCCAGCTGCGCCACGCCGC GGACGCGCAATGGGTATGGCTGGCGCCGGGCTTCCCGCCGGTCGATGCTGATACCAATGCCGATACCCACAAGACACTCG CTAGGCCCGCGGGCGCGACGCAACCGGTCTCCAGCCTGTTGCGCGAGCTCGATGCCAGCCTGCCGCCAGATGCGGCGCTC AGCGTGATCGTGCCGGCCCAGTGGGGCCCGCTGGATGCGCAACGGCTGCAGCTGTCGCATCAGGTGCGGTGGCAAATCGT GCCCGGCCAGTCGCCGCTTGCGGCGCCCGCCGCTGCCGCGCCGCTGCGCCTGCAGGCGATTGCCGACGACAGCGCCGCGC CGGCCCTGCGCTATCTGCGCGCCGTACACGCCGCCTGGGCGCTGCCGGGCAGCTTGCCCGTGGGCACGCCGGCCGATGCG CAGCCTTCGCGCTGGCAGCCCGGCACCGTGGTGGCATGGCTCTCGCGCAGTGCCCCACCGGCGCCGGTGATGGCCTGGGT CGCAGCCGGTGGGAGGCTGGTGCTGGAAGCGCAGACACCCGTCCCGCCCAACCTCGCCGCGACACTGCAGCCCGTGCAAC AGGCTACGTCGGGCGAGCCATTGCTCGACGCCGCAGCGCTCGGCCGCGGACGCGTGTTGCGCTGGGCCGCACCGCTGCAG CCGCAGCAACTGCCGGCGCTGCTGGATGCCGATTTCCCCACCCGCCTGCACGACGCCCTGCAGCCGCTGCCCACACCGCA GCGCGCGCTGGCACAGACCCAGCAACCGCAACGCGGTGCCGCCAGCCGCCTGACGACGGCGCCGTGGCCGCTGGCGCCGT GGCTAATCGGCCTGGTGCTGCTGCTGTTCGCGCTCGAACGCTGGCTGGCCACCGCGCCGCGCCGGTCCACTCCCGCATGA
Upstream 100 bases:
>100_bases GACGCTGCACCCGACGCGGCGTTGCGCCAGTTGTTCGGGCAAGGCGCGCAGCGATGAGCTGGCAGGTCGGCCGCGAGCAT GTCGCCAGGCGGGTGCCGCG
Downstream 100 bases:
>100_bases GCACGCCGGCACTGCAGCGGGCGTGGCAGGCGGCACGGCGGCGACAGGCCGCAGGCGTGCTGCTGTTCGGACTGCCGCTG GCGGCGGTGCCGGCGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MNLLLLFPAGLAALAALLLPLLIHLARRSEHRPTDFAALRWLRALPRPRHHVRLDEWPLLLVRLLLLAAVALLLAEPAVR GHDDARPRIALSPGVDVAAARQLRHAADAQWVWLAPGFPPVDADTNADTHKTLARPAGATQPVSSLLRELDASLPPDAAL SVIVPAQWGPLDAQRLQLSHQVRWQIVPGQSPLAAPAAAAPLRLQAIADDSAAPALRYLRAVHAAWALPGSLPVGTPADA QPSRWQPGTVVAWLSRSAPPAPVMAWVAAGGRLVLEAQTPVPPNLAATLQPVQQATSGEPLLDAAALGRGRVLRWAAPLQ PQQLPALLDADFPTRLHDALQPLPTPQRALAQTQQPQRGAASRLTTAPWPLAPWLIGLVLLLFALERWLATAPRRSTPA
Sequences:
>Translated_399_residues MNLLLLFPAGLAALAALLLPLLIHLARRSEHRPTDFAALRWLRALPRPRHHVRLDEWPLLLVRLLLLAAVALLLAEPAVR GHDDARPRIALSPGVDVAAARQLRHAADAQWVWLAPGFPPVDADTNADTHKTLARPAGATQPVSSLLRELDASLPPDAAL SVIVPAQWGPLDAQRLQLSHQVRWQIVPGQSPLAAPAAAAPLRLQAIADDSAAPALRYLRAVHAAWALPGSLPVGTPADA QPSRWQPGTVVAWLSRSAPPAPVMAWVAAGGRLVLEAQTPVPPNLAATLQPVQQATSGEPLLDAAALGRGRVLRWAAPLQ PQQLPALLDADFPTRLHDALQPLPTPQRALAQTQQPQRGAASRLTTAPWPLAPWLIGLVLLLFALERWLATAPRRSTPA >Mature_399_residues MNLLLLFPAGLAALAALLLPLLIHLARRSEHRPTDFAALRWLRALPRPRHHVRLDEWPLLLVRLLLLAAVALLLAEPAVR GHDDARPRIALSPGVDVAAARQLRHAADAQWVWLAPGFPPVDADTNADTHKTLARPAGATQPVSSLLRELDASLPPDAAL SVIVPAQWGPLDAQRLQLSHQVRWQIVPGQSPLAAPAAAAPLRLQAIADDSAAPALRYLRAVHAAWALPGSLPVGTPADA QPSRWQPGTVVAWLSRSAPPAPVMAWVAAGGRLVLEAQTPVPPNLAATLQPVQQATSGEPLLDAAALGRGRVLRWAAPLQ PQQLPALLDADFPTRLHDALQPLPTPQRALAQTQQPQRGAASRLTTAPWPLAPWLIGLVLLLFALERWLATAPRRSTPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42710; Mature: 42710
Theoretical pI: Translated: 11.84; Mature: 11.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLLLFPAGLAALAALLLPLLIHLARRSEHRPTDFAALRWLRALPRPRHHVRLDEWPLL CCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHH LVRLLLLAAVALLLAEPAVRGHDDARPRIALSPGVDVAAARQLRHAADAQWVWLAPGFPP HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCC VDADTNADTHKTLARPAGATQPVSSLLRELDASLPPDAALSVIVPAQWGPLDAQRLQLSH CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH QVRWQIVPGQSPLAAPAAAAPLRLQAIADDSAAPALRYLRAVHAAWALPGSLPVGTPADA CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QPSRWQPGTVVAWLSRSAPPAPVMAWVAAGGRLVLEAQTPVPPNLAATLQPVQQATSGEP CCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC LLDAAALGRGRVLRWAAPLQPQQLPALLDADFPTRLHDALQPLPTPQRALAQTQQPQRGA HHHHHHCCCCCEEEEECCCCHHHCHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHH ASRLTTAPWPLAPWLIGLVLLLFALERWLATAPRRSTPA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNLLLLFPAGLAALAALLLPLLIHLARRSEHRPTDFAALRWLRALPRPRHHVRLDEWPLL CCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHH LVRLLLLAAVALLLAEPAVRGHDDARPRIALSPGVDVAAARQLRHAADAQWVWLAPGFPP HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCC VDADTNADTHKTLARPAGATQPVSSLLRELDASLPPDAALSVIVPAQWGPLDAQRLQLSH CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH QVRWQIVPGQSPLAAPAAAAPLRLQAIADDSAAPALRYLRAVHAAWALPGSLPVGTPADA CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC QPSRWQPGTVVAWLSRSAPPAPVMAWVAAGGRLVLEAQTPVPPNLAATLQPVQQATSGEP CCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC LLDAAALGRGRVLRWAAPLQPQQLPALLDADFPTRLHDALQPLPTPQRALAQTQQPQRGA HHHHHHCCCCCEEEEECCCCHHHCHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHH ASRLTTAPWPLAPWLIGLVLLLFALERWLATAPRRSTPA HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA