| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240886
Identifier: 21240886
GI number: 21240886
Start: 129654
End: 130445
Strand: Direct
Name: 21240886
Synonym: XAC0112
Alternate gene names: NA
Gene position: 129654-130445 (Clockwise)
Preceding gene: 21240884
Following gene: 77748507
Centisome position: 2.51
GC content: 68.69
Gene sequence:
>792_bases ATGGACGCTGCCGCGCAGCGCGATCTGGCCACGGCCCACGCATTGCTGGAAAACCCCGGCGTGGCAGCGCAACTGGCCAA TGCGCTGGGCGCGCCGATCGAGAGCCTGATCACCAAACGGCTTCCCAAGGTGGTGACCCGCAGCATCGACGGCGTGACCC GTCGCGCGCTGCAGGTGGCGATGAAATCGGCGTTGCTGAGCCTGCGCGGCAAGACCGATGCGCAGCAACCGGCATCCACG ACGCGGCATACGTTGGCGGTGGCGGTTTCCGGCGGCGCAGGCGGGTTCTTCGGCCTGCCGGGCTTGATGGTGGAGCTGCC GGTGACCACGACGGTGATGCTGCGCTCCATCGCCGATATCGCCCGTGCCGAAGGCGAATCGCTGCACGACCCGGAAACCG CGCTGGCGTGCCTGGAAGTGCTGGCGCATGGCGGCCGCAGTGCCAGCGACGACGGCGCCGAATCCGGCTACTTCGCAGTG CGTGCGGCGATGGCGCAGCAATTGAGCGCCGCGGCCAGCTACGTGGCCGCGCACGGCTTCGCCAGCAAGGGTGCACCGGC GCTGGTCTCGCTGGTCTCGCGCATCGCGGCGAAGTTTTCGGTCAACGTGGGCGAAAAACTCGCCGTACAGGCGGTGCCGC TGGTCGGCGCGGTCAGCGGCGCCACGCTCAATACCGTGTTCATGCGCCACTTCCAGGCGATGGCGCGCGGACATTTCATC GTGCGTCGGCTGGAGCGTCGCTTCGGCGAAGAAGCGGTGCGGCGTGCGTATGAGGCCTTGCCGCCGCGGTGA
Upstream 100 bases:
>100_bases CAGGGTCCAGTTCGCTTGTGCGGCACTCACATCGCGCTGGGTACCATCGGCCAGGTCCCAACCATGATGAGCAGGCATGA CAACGCTTCCGATACCGGTG
Downstream 100 bases:
>100_bases TGCGTACCGCTGCATGCGAAGGTCAGGATAGCTGCGAGGTCATCGTGCAGTGGGTGCGCAGCCATGGATGACGCTCGCAA CGCAGTGCGGGCGAAGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MDAAAQRDLATAHALLENPGVAAQLANALGAPIESLITKRLPKVVTRSIDGVTRRALQVAMKSALLSLRGKTDAQQPAST TRHTLAVAVSGGAGGFFGLPGLMVELPVTTTVMLRSIADIARAEGESLHDPETALACLEVLAHGGRSASDDGAESGYFAV RAAMAQQLSAAASYVAAHGFASKGAPALVSLVSRIAAKFSVNVGEKLAVQAVPLVGAVSGATLNTVFMRHFQAMARGHFI VRRLERRFGEEAVRRAYEALPPR
Sequences:
>Translated_263_residues MDAAAQRDLATAHALLENPGVAAQLANALGAPIESLITKRLPKVVTRSIDGVTRRALQVAMKSALLSLRGKTDAQQPAST TRHTLAVAVSGGAGGFFGLPGLMVELPVTTTVMLRSIADIARAEGESLHDPETALACLEVLAHGGRSASDDGAESGYFAV RAAMAQQLSAAASYVAAHGFASKGAPALVSLVSRIAAKFSVNVGEKLAVQAVPLVGAVSGATLNTVFMRHFQAMARGHFI VRRLERRFGEEAVRRAYEALPPR >Mature_263_residues MDAAAQRDLATAHALLENPGVAAQLANALGAPIESLITKRLPKVVTRSIDGVTRRALQVAMKSALLSLRGKTDAQQPAST TRHTLAVAVSGGAGGFFGLPGLMVELPVTTTVMLRSIADIARAEGESLHDPETALACLEVLAHGGRSASDDGAESGYFAV RAAMAQQLSAAASYVAAHGFASKGAPALVSLVSRIAAKFSVNVGEKLAVQAVPLVGAVSGATLNTVFMRHFQAMARGHFI VRRLERRFGEEAVRRAYEALPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27400; Mature: 27400
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAAQRDLATAHALLENPGVAAQLANALGAPIESLITKRLPKVVTRSIDGVTRRALQVA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKSALLSLRGKTDAQQPASTTRHTLAVAVSGGAGGFFGLPGLMVELPVTTTVMLRSIADI HHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHH ARAEGESLHDPETALACLEVLAHGGRSASDDGAESGYFAVRAAMAQQLSAAASYVAAHGF HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ASKGAPALVSLVSRIAAKFSVNVGEKLAVQAVPLVGAVSGATLNTVFMRHFQAMARGHFI CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VRRLERRFGEEAVRRAYEALPPR HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDAAAQRDLATAHALLENPGVAAQLANALGAPIESLITKRLPKVVTRSIDGVTRRALQVA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKSALLSLRGKTDAQQPASTTRHTLAVAVSGGAGGFFGLPGLMVELPVTTTVMLRSIADI HHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHH ARAEGESLHDPETALACLEVLAHGGRSASDDGAESGYFAVRAAMAQQLSAAASYVAAHGF HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ASKGAPALVSLVSRIAAKFSVNVGEKLAVQAVPLVGAVSGATLNTVFMRHFQAMARGHFI CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VRRLERRFGEEAVRRAYEALPPR HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA