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The map label for this gene is prt1 [H]

Identifier: 21240878

GI number: 21240878

Start: 118988

End: 120058

Strand: Reverse

Name: prt1 [H]

Synonym: XAC0104

Alternate gene names: 21240878

Gene position: 120058-118988 (Counterclockwise)

Preceding gene: 21240879

Following gene: 21240877

Centisome position: 2.32

GC content: 69.28

Gene sequence:

>1071_bases
ATGTCCACGTTCGTCAGCCCGCGCCGCGCCGGGATCCTGCCGCCGTATCTGCTCGAACACGTGGCGCAGGCCGCGCCCGC
ACACGCGCGCCAGTGCGCGCTGCTGTCGCGGCAGATCACCGCGCAGCTACGGCAGCAGCGCGCGCTGGGCTTGCTGGCAC
GCGCCGATGCGCCGGCGGCAGACGCCAAGGCGCAGCAGACCGCCCAGGCGGTGCAGCGGCGCATCTACGATGCCCAGCAA
GGCACCACCCTGCCTGGCACCCTGGCGCGTGACGAAGGTGCCCCCGCGACCCAGGACGTGGCGGTGACCGAAGCCTACGA
CTACCTGGGCGCCACCCACGATTTCTTCCAGACCGTGTACGGGCGCGATTCGATCGACGCGGCGGGCATGCCGCTGATCG
GCACCGTGCATTACGAGCGCGGCTACGACAACGCGTTCTGGAACGGCGAGCAGATGGTGTTCGGCGATGGCGACGGCGAG
GTGTTCAACCGCTTCACCATCGCCATCGATGTGGTCGGGCACGAGCTCACCCACGGCGTCACCGAGCGCACCGCCAACCT
GATCTATCAAGGCCAGTCCGGCGCCTTGAATGAATCGATTTCGGACGTGTTCGGCGTGCTGATCAAGCAATACACGCTGG
GCCAGAGCGCCGACCAGGCCGACTGGATCATCGGCGCCGGCTTGCTGATGCCCGGCATCCAGGGCGTGGGCCTGCGCTCG
ATGCAGGCGCCCGGCAGCGCGTACGATGACCCGGCCCTGGGCAAGGATCCGCAGCCGGCGACCATGGCCGGCTATGTCGA
CACGCAAGAGGACGATGGCGGCGTGCACTACAACTCCGGCATTCCCAACCACGCGTTCTATCGCGCCGCCGTCGCGATCG
GTGGGGCGGCGTGGGAGAAGACCGGGCGCATCTGGTATCGCGCGCTCACCGGTGGCGAGCTGGCCGCCAGCGCGGACTTC
GCCACGTTCGCCGACCTGACCGCCAGCGTGGCCAGCGCCGACTACGGCGCCAACAGCAGCGAAGCTGTGGCCCTCCGGCA
AGCCTGGCGCGACGTGGGCGTGCTCGCATGA

Upstream 100 bases:

>100_bases
CCGCGCGATCCGCACTGCACGCGGCAATTGGCTCCGGCTAACGAATTCCTAAAGCCGGCGCCCGCATAGTCGCCAGCGCA
GCCCATTGTGGAGGTCGCTT

Downstream 100 bases:

>100_bases
GCCCACAACGGCCACCAGTGGAAACGGGCGTGACCTTGCGGCTGGCGCGCGAAGGCGGGGTGGCGGCGTTTCCGGCCATG
CGCCGCGAGCGCCAGTTGGC

Product: metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSTFVSPRRAGILPPYLLEHVAQAAPAHARQCALLSRQITAQLRQQRALGLLARADAPAADAKAQQTAQAVQRRIYDAQQ
GTTLPGTLARDEGAPATQDVAVTEAYDYLGATHDFFQTVYGRDSIDAAGMPLIGTVHYERGYDNAFWNGEQMVFGDGDGE
VFNRFTIAIDVVGHELTHGVTERTANLIYQGQSGALNESISDVFGVLIKQYTLGQSADQADWIIGAGLLMPGIQGVGLRS
MQAPGSAYDDPALGKDPQPATMAGYVDTQEDDGGVHYNSGIPNHAFYRAAVAIGGAAWEKTGRIWYRALTGGELAASADF
ATFADLTASVASADYGANSSEAVALRQAWRDVGVLA

Sequences:

>Translated_356_residues
MSTFVSPRRAGILPPYLLEHVAQAAPAHARQCALLSRQITAQLRQQRALGLLARADAPAADAKAQQTAQAVQRRIYDAQQ
GTTLPGTLARDEGAPATQDVAVTEAYDYLGATHDFFQTVYGRDSIDAAGMPLIGTVHYERGYDNAFWNGEQMVFGDGDGE
VFNRFTIAIDVVGHELTHGVTERTANLIYQGQSGALNESISDVFGVLIKQYTLGQSADQADWIIGAGLLMPGIQGVGLRS
MQAPGSAYDDPALGKDPQPATMAGYVDTQEDDGGVHYNSGIPNHAFYRAAVAIGGAAWEKTGRIWYRALTGGELAASADF
ATFADLTASVASADYGANSSEAVALRQAWRDVGVLA
>Mature_355_residues
STFVSPRRAGILPPYLLEHVAQAAPAHARQCALLSRQITAQLRQQRALGLLARADAPAADAKAQQTAQAVQRRIYDAQQG
TTLPGTLARDEGAPATQDVAVTEAYDYLGATHDFFQTVYGRDSIDAAGMPLIGTVHYERGYDNAFWNGEQMVFGDGDGEV
FNRFTIAIDVVGHELTHGVTERTANLIYQGQSGALNESISDVFGVLIKQYTLGQSADQADWIIGAGLLMPGIQGVGLRSM
QAPGSAYDDPALGKDPQPATMAGYVDTQEDDGGVHYNSGIPNHAFYRAAVAIGGAAWEKTGRIWYRALTGGELAASADFA
TFADLTASVASADYGANSSEAVALRQAWRDVGVLA

Specific function: Unknown

COG id: COG3227

COG function: function code E; Zinc metalloprotease (elastase)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013856
- InterPro:   IPR001570 [H]

Pfam domain/function: PF01447 Peptidase_M4; PF02868 Peptidase_M4_C [H]

EC number: NA

Molecular weight: Translated: 37812; Mature: 37681

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFVSPRRAGILPPYLLEHVAQAAPAHARQCALLSRQITAQLRQQRALGLLARADAPAA
CCCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DAKAQQTAQAVQRRIYDAQQGTTLPGTLARDEGAPATQDVAVTEAYDYLGATHDFFQTVY
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
GRDSIDAAGMPLIGTVHYERGYDNAFWNGEQMVFGDGDGEVFNRFTIAIDVVGHELTHGV
CCCCCCCCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCEEEEEEEEEEEHHHHHHHHH
TERTANLIYQGQSGALNESISDVFGVLIKQYTLGQSADQADWIIGAGLLMPGIQGVGLRS
HHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHCCCCCCCCCC
MQAPGSAYDDPALGKDPQPATMAGYVDTQEDDGGVHYNSGIPNHAFYRAAVAIGGAAWEK
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHH
TGRIWYRALTGGELAASADFATFADLTASVASADYGANSSEAVALRQAWRDVGVLA
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STFVSPRRAGILPPYLLEHVAQAAPAHARQCALLSRQITAQLRQQRALGLLARADAPAA
CCCCCCHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DAKAQQTAQAVQRRIYDAQQGTTLPGTLARDEGAPATQDVAVTEAYDYLGATHDFFQTVY
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
GRDSIDAAGMPLIGTVHYERGYDNAFWNGEQMVFGDGDGEVFNRFTIAIDVVGHELTHGV
CCCCCCCCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCEEEEEEEEEEEHHHHHHHHH
TERTANLIYQGQSGALNESISDVFGVLIKQYTLGQSADQADWIIGAGLLMPGIQGVGLRS
HHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHCCCCCCCCCC
MQAPGSAYDDPALGKDPQPATMAGYVDTQEDDGGVHYNSGIPNHAFYRAAVAIGGAAWEK
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHH
TGRIWYRALTGGELAASADFATFADLTASVASADYGANSSEAVALRQAWRDVGVLA
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1917878 [H]