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The map label for this gene is yhfK [H]

Identifier: 21240879

GI number: 21240879

Start: 120169

End: 120825

Strand: Reverse

Name: yhfK [H]

Synonym: XAC0105

Alternate gene names: 21240879

Gene position: 120825-120169 (Counterclockwise)

Preceding gene: 21240885

Following gene: 21240878

Centisome position: 2.33

GC content: 68.95

Gene sequence:

>657_bases
ATGTCGCGAATTCTCGTCATCGGCGGCCACGGCAAGGTGGCGCGCCTGCTCACGCCGCTGTTGGTGCAGGGCGGGCATCA
GGTCACTGCGTTGTTCCGTAACCCCGCACACGAAGACGATGTGATTGCCGATGGCGCCACGCCGGTGGTATTGGACACCG
AACGCGCGCAGACCGACGCCATCGCCGCGCAACTGGCCGGTCACGATGCGGTGGTGTGGTCGGCCGGGGCGGGCGGCGGC
GATGCAGCGCGCACCTATGCGGTGGATCGCGATGCGGCCATTCGCGCCATGCACGCAGCCGAGCAGGCACGCGTGCGTCG
CTATGTGATGGTGTCCTATCTCGGCGCCGGGCTGGAACACGGTATCGGGCCAGACGATGCGTTCTTCGCCTATGCGCAGG
CCAAGGCCGCTGCCGATGCGCACCTGCGCAGTACCACGCTGGACTGGACCGTGCTCGGCCCTGGCCGGCTCACGCTGGAC
CCGCCCTCGGGCCGCATCACCCGCGACCCGGGCAGCGATGCCGACGGCGGCGTCTCGCGTGCCAACGTGGCGCGGGTGAT
CGCCGCCGCACTGGCAACGCCGGGCAGCATCGGCAAAACGATGGGCTTCATCGACGGACAGACTCCCATTGCGCAGGCGC
TGTCGCAGCTGGAATGA

Upstream 100 bases:

>100_bases
GTTATGGCAGCGCTGGTGCCCGATGACACCGCCTTATCACCGCATTGGCGAGGATGGCCTCCTTACGCGCCATGCTGGCG
CGCGGCTGTTGGAGAGGTCC

Downstream 100 bases:

>100_bases
ACGCAACACCCCGCGCGATCCGCACTGCACGCGGCAATTGGCTCCGGCTAACGAATTCCTAAAGCCGGCGCCCGCATAGT
CGCCAGCGCAGCCCATTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSRILVIGGHGKVARLLTPLLVQGGHQVTALFRNPAHEDDVIADGATPVVLDTERAQTDAIAAQLAGHDAVVWSAGAGGG
DAARTYAVDRDAAIRAMHAAEQARVRRYVMVSYLGAGLEHGIGPDDAFFAYAQAKAAADAHLRSTTLDWTVLGPGRLTLD
PPSGRITRDPGSDADGGVSRANVARVIAAALATPGSIGKTMGFIDGQTPIAQALSQLE

Sequences:

>Translated_218_residues
MSRILVIGGHGKVARLLTPLLVQGGHQVTALFRNPAHEDDVIADGATPVVLDTERAQTDAIAAQLAGHDAVVWSAGAGGG
DAARTYAVDRDAAIRAMHAAEQARVRRYVMVSYLGAGLEHGIGPDDAFFAYAQAKAAADAHLRSTTLDWTVLGPGRLTLD
PPSGRITRDPGSDADGGVSRANVARVIAAALATPGSIGKTMGFIDGQTPIAQALSQLE
>Mature_217_residues
SRILVIGGHGKVARLLTPLLVQGGHQVTALFRNPAHEDDVIADGATPVVLDTERAQTDAIAAQLAGHDAVVWSAGAGGGD
AARTYAVDRDAAIRAMHAAEQARVRRYVMVSYLGAGLEHGIGPDDAFFAYAQAKAAADAHLRSTTLDWTVLGPGRLTLDP
PSGRITRDPGSDADGGVSRANVARVIAAALATPGSIGKTMGFIDGQTPIAQALSQLE

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=231, Percent_Identity=29.4372294372294, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22506; Mature: 22374

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRILVIGGHGKVARLLTPLLVQGGHQVTALFRNPAHEDDVIADGATPVVLDTERAQTDA
CCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCEEEEECCHHHHHH
IAAQLAGHDAVVWSAGAGGGDAARTYAVDRDAAIRAMHAAEQARVRRYVMVSYLGAGLEH
HHHHHCCCCEEEEECCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIGPDDAFFAYAQAKAAADAHLRSTTLDWTVLGPGRLTLDPPSGRITRDPGSDADGGVSR
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEECCCCCCCCCCCHH
ANVARVIAAALATPGSIGKTMGFIDGQTPIAQALSQLE
HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SRILVIGGHGKVARLLTPLLVQGGHQVTALFRNPAHEDDVIADGATPVVLDTERAQTDA
CEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCEEEEECCHHHHHH
IAAQLAGHDAVVWSAGAGGGDAARTYAVDRDAAIRAMHAAEQARVRRYVMVSYLGAGLEH
HHHHHCCCCEEEEECCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIGPDDAFFAYAQAKAAADAHLRSTTLDWTVLGPGRLTLDPPSGRITRDPGSDADGGVSR
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCEECCCCCCCCCCCHH
ANVARVIAAALATPGSIGKTMGFIDGQTPIAQALSQLE
HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]