| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240846
Identifier: 21240846
GI number: 21240846
Start: 85767
End: 86897
Strand: Direct
Name: 21240846
Synonym: XAC0072
Alternate gene names: NA
Gene position: 85767-86897 (Clockwise)
Preceding gene: 21240845
Following gene: 21240849
Centisome position: 1.66
GC content: 68.7
Gene sequence:
>1131_bases ATGACGTATCGGGTAGTGGTATTGGGCGGCTTCGGCCACTTCGGTGCACGCATCGTGCGTGCGTTGGCTGCAACCGCGCA GATCCACGTCATTGCCGCGGGCCGGCGTCCGGGCGATGCAGCGACCACCTGGCCGGGTGTCGCACCCGGCCGCATCTCCA CCTGCCGCCTGGACATCGATGCAAGCGACTTTTCCGCGCAACTGGCGGCCACCGGCGCCGATGCGGTGGTGCATACCGCC GGGCCGTTCCAGGGACAGCAGTACGCGGTGGCCCGCTGCTGCCTGCAGGCCGGCATGCACTACATCGATCTGGCCGATGG CCGCGCCTTCGTCCGCGATTTCGCCGCGGCGATGGACCCCGCCGCGCGCCAGGCCCAGCGCGTGGCGATCAGCGGTGCCA GTACCTTGCCGGCGTTGTCCAGCGCGGTGATCGATGCGCTGTTGCCGCGCTTTTCGGCATTGCACGAGATCGGCATCGTC ATCGCGCCCGCACAGGGCACGCCGTTGGGTCTGGCCACCGTGCGTGCGGTGCTGTCGTACTGCGGCACGCCTTTCAACTG GTGGCAGGCTGGCCGCTGGCAGCAGGTGGTGGGTTGGGCGCGCCCCACGCGCGTGCAGTTCGCGCAGCTCGCCCCACGCC TGGCCTCGCCGTGCGATGTGCCCGATCACGACCTGTTGCCGCAGCGCTATCCCGGCGTGCAGACCGTGCAATTTCGTGCG GCGCTGGAAGTGCCGTTCCTGCAGCGCTGCCTTGCCGGCGTCGCCTGGCTACGTCGACGCGGCGTGCCGCTACCGATGCA GCGCCTGGCCGATGTGTTTGCCAACGCCGGACGCTGGTTCGACCGCTTCGGTACCGACCTGGGCGGCATGCGGGTGGAGC TGCGCGGCACCTGCGATGGTAGAGACGGGACAAGCCGCCCGCTGGTGTTGCACTGGGACCTCACCGCCGCGATGCTGCAC GGCCCGGAAATTCCGTGTTTCGCCGCTGTTTTGCTGATACGCAAACTCGCTGCCGGGCATCGGTTGCCGATCGGTGCGCA TGCCTGCATGGGGCTGCTGACGCTGGCCGAGTTCGAGCAGGAGTTTGCCGCATGGCAGATGAGCACGGCGGTGACGCAAG CGCACCGGTAA
Upstream 100 bases:
>100_bases CGCGTATCGACGGTTAGCCGGACTGCGCCGGTCGCGTGCATGTGCGTGCATCGTGGTGCGCTCGCCGATACTGTGCACAG ACACAGGCGGCGAGCAGGCC
Downstream 100 bases:
>100_bases TCGGGCGAGGCGCAAGACCAGCGCAGCGCCAGGCCTTTGCCGACCACACCAGGCGGGAAACCAAGCTCTCTGTACGCGGC GGGGAGTTCCGAAACCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Potassium Efflux System Protein; Saccharopine Dehydrogenase Domain Protein; Secreted Protein
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MTYRVVVLGGFGHFGARIVRALAATAQIHVIAAGRRPGDAATTWPGVAPGRISTCRLDIDASDFSAQLAATGADAVVHTA GPFQGQQYAVARCCLQAGMHYIDLADGRAFVRDFAAAMDPAARQAQRVAISGASTLPALSSAVIDALLPRFSALHEIGIV IAPAQGTPLGLATVRAVLSYCGTPFNWWQAGRWQQVVGWARPTRVQFAQLAPRLASPCDVPDHDLLPQRYPGVQTVQFRA ALEVPFLQRCLAGVAWLRRRGVPLPMQRLADVFANAGRWFDRFGTDLGGMRVELRGTCDGRDGTSRPLVLHWDLTAAMLH GPEIPCFAAVLLIRKLAAGHRLPIGAHACMGLLTLAEFEQEFAAWQMSTAVTQAHR
Sequences:
>Translated_376_residues MTYRVVVLGGFGHFGARIVRALAATAQIHVIAAGRRPGDAATTWPGVAPGRISTCRLDIDASDFSAQLAATGADAVVHTA GPFQGQQYAVARCCLQAGMHYIDLADGRAFVRDFAAAMDPAARQAQRVAISGASTLPALSSAVIDALLPRFSALHEIGIV IAPAQGTPLGLATVRAVLSYCGTPFNWWQAGRWQQVVGWARPTRVQFAQLAPRLASPCDVPDHDLLPQRYPGVQTVQFRA ALEVPFLQRCLAGVAWLRRRGVPLPMQRLADVFANAGRWFDRFGTDLGGMRVELRGTCDGRDGTSRPLVLHWDLTAAMLH GPEIPCFAAVLLIRKLAAGHRLPIGAHACMGLLTLAEFEQEFAAWQMSTAVTQAHR >Mature_375_residues TYRVVVLGGFGHFGARIVRALAATAQIHVIAAGRRPGDAATTWPGVAPGRISTCRLDIDASDFSAQLAATGADAVVHTAG PFQGQQYAVARCCLQAGMHYIDLADGRAFVRDFAAAMDPAARQAQRVAISGASTLPALSSAVIDALLPRFSALHEIGIVI APAQGTPLGLATVRAVLSYCGTPFNWWQAGRWQQVVGWARPTRVQFAQLAPRLASPCDVPDHDLLPQRYPGVQTVQFRAA LEVPFLQRCLAGVAWLRRRGVPLPMQRLADVFANAGRWFDRFGTDLGGMRVELRGTCDGRDGTSRPLVLHWDLTAAMLHG PEIPCFAAVLLIRKLAAGHRLPIGAHACMGLLTLAEFEQEFAAWQMSTAVTQAHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40439; Mature: 40308
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRVVVLGGFGHFGARIVRALAATAQIHVIAAGRRPGDAATTWPGVAPGRISTCRLDID CEEEEEEEECCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC ASDFSAQLAATGADAVVHTAGPFQGQQYAVARCCLQAGMHYIDLADGRAFVRDFAAAMDP CCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCH AARQAQRVAISGASTLPALSSAVIDALLPRFSALHEIGIVIAPAQGTPLGLATVRAVLSY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHH CGTPFNWWQAGRWQQVVGWARPTRVQFAQLAPRLASPCDVPDHDLLPQRYPGVQTVQFRA CCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHH ALEVPFLQRCLAGVAWLRRRGVPLPMQRLADVFANAGRWFDRFGTDLGGMRVELRGTCDG HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCC RDGTSRPLVLHWDLTAAMLHGPEIPCFAAVLLIRKLAAGHRLPIGAHACMGLLTLAEFEQ CCCCCCCEEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH EFAAWQMSTAVTQAHR HHHHHHHHHHHHHCCC >Mature Secondary Structure TYRVVVLGGFGHFGARIVRALAATAQIHVIAAGRRPGDAATTWPGVAPGRISTCRLDID EEEEEEEECCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC ASDFSAQLAATGADAVVHTAGPFQGQQYAVARCCLQAGMHYIDLADGRAFVRDFAAAMDP CCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCH AARQAQRVAISGASTLPALSSAVIDALLPRFSALHEIGIVIAPAQGTPLGLATVRAVLSY HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHH CGTPFNWWQAGRWQQVVGWARPTRVQFAQLAPRLASPCDVPDHDLLPQRYPGVQTVQFRA CCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHH ALEVPFLQRCLAGVAWLRRRGVPLPMQRLADVFANAGRWFDRFGTDLGGMRVELRGTCDG HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCC RDGTSRPLVLHWDLTAAMLHGPEIPCFAAVLLIRKLAAGHRLPIGAHACMGLLTLAEFEQ CCCCCCCEEEEECHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH EFAAWQMSTAVTQAHR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA