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The map label for this gene is xylR [C]

Identifier: 21240849

GI number: 21240849

Start: 90593

End: 91750

Strand: Direct

Name: xylR [C]

Synonym: XAC0075

Alternate gene names: 21240849

Gene position: 90593-91750 (Clockwise)

Preceding gene: 21240846

Following gene: 21240850

Centisome position: 1.75

GC content: 68.31

Gene sequence:

>1158_bases
ATGCCCTCTTTGTTCGCAAACGCAGCCATTCGTTCGCATTACCGTCGTCGCAGCGATGGGCAGGCCGCCGGGTCCAGCGA
GCGCCTGCTGCTGGATCTGATCCGCAGGGCCGGGCAGTTCGAGCGTGCGGATCTGCCGCGCGCCAGCGGGCTCAGCGTGC
CCGGCATCAAGGGCATCGTCGACCCGCTGGTGGCGCACGGCCTGCTGCAGCTGCGGCCCTCGTTGCGGCGTGGCCGCGGC
CAACCGAGCGCGCAGGTGAGCCTGGTGCCGGGGTATGCATACAGCGTGGGGGTGTCGGTGATGGTCGATGGCTTCGCGGT
GGTGCTGATCGACTTCGCCGGCCAGGTCCGTGGCATGCGCCAGCTCACGGCCTTCCCGCTGACGCTGGCGGTGGTGCGTG
CACGCCTGCCGGCCTTGGTGGAGGCGCTGCTACGGACGGCCGGCGTGGATCGGCAGCATGTGTTCGGCGTCGGTCTGAGC
ATGACCGGCCCGCGCATCGGCGATGGCACCCGGGTCAATCCGCCCTTGTCGCTGGCAGCGGAATGGATGCAGGTGGAGCT
GGACCGGTTTGTCGCCGATTGCCTGCAGCTACCGGTCTGGATGGACAACGACGCCCATTGCGCCGCCCTGGCCGAGGCCG
TGTACGGCATTGGCCGCCAATCGCCGGACCTGGTCTATCTGTCGATCTCCGACGGCTTTGCTGCCGGCGTGATTGCTGCC
GGCAACGTGCGCCGCGGCGCGCACGGCAATGTGGGCGAACTGGGGCGCATCTCGGCCATCACCGGCATGGCGCGGCCAAC
GCTGGAAAGCCTGCGCCAGGCGCTGGTCGCCGATGGCCACGCGCTGCCGGACCTGTACACCATGCTGCAGCATTACGATG
CGGCGTGGCCGCAGATCGACGCGTGGCTGGATGCAGTGCAACCGACCGTGACGCTTGCGGTGGCGGCGATCATTGCGTTG
ATCGATCCGCGTGTGATTGTTTTTGGCGCGCGCCTGCCAACCGATCTTGCGCAACGGCTGATCGCCCGCATCGCCTTCGA
ACCTGCGCCGCGGCGTGGCGTTGCATTGCCGTATCCGACCCTGCAGGTCGGGCAGGTGACGGCGCATGCCACCGTGCTGG
GCGCGGCCATGCTGCCGTTCAAGGAAACGCTGTTCTAG

Upstream 100 bases:

>100_bases
CACGATACCAACGTCGGTGGCCCCAACGCAGGGCCGCGGACGGATTAAATTAAGCTGCTTAATTAAAGCGATTATGACAA
CGACGGACGTTTCGCCCTGC

Downstream 100 bases:

>100_bases
CGCGCGTCATGCGCGGCGATGTGCGCGCCAAGCGCTGTGCAACGCGTCCAAACGAGGCATGCGCTGCCCGCCTGCACCAC
CCGCACAACGCAGGCATCGT

Product: xylose repressor-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MPSLFANAAIRSHYRRRSDGQAAGSSERLLLDLIRRAGQFERADLPRASGLSVPGIKGIVDPLVAHGLLQLRPSLRRGRG
QPSAQVSLVPGYAYSVGVSVMVDGFAVVLIDFAGQVRGMRQLTAFPLTLAVVRARLPALVEALLRTAGVDRQHVFGVGLS
MTGPRIGDGTRVNPPLSLAAEWMQVELDRFVADCLQLPVWMDNDAHCAALAEAVYGIGRQSPDLVYLSISDGFAAGVIAA
GNVRRGAHGNVGELGRISAITGMARPTLESLRQALVADGHALPDLYTMLQHYDAAWPQIDAWLDAVQPTVTLAVAAIIAL
IDPRVIVFGARLPTDLAQRLIARIAFEPAPRRGVALPYPTLQVGQVTAHATVLGAAMLPFKETLF

Sequences:

>Translated_385_residues
MPSLFANAAIRSHYRRRSDGQAAGSSERLLLDLIRRAGQFERADLPRASGLSVPGIKGIVDPLVAHGLLQLRPSLRRGRG
QPSAQVSLVPGYAYSVGVSVMVDGFAVVLIDFAGQVRGMRQLTAFPLTLAVVRARLPALVEALLRTAGVDRQHVFGVGLS
MTGPRIGDGTRVNPPLSLAAEWMQVELDRFVADCLQLPVWMDNDAHCAALAEAVYGIGRQSPDLVYLSISDGFAAGVIAA
GNVRRGAHGNVGELGRISAITGMARPTLESLRQALVADGHALPDLYTMLQHYDAAWPQIDAWLDAVQPTVTLAVAAIIAL
IDPRVIVFGARLPTDLAQRLIARIAFEPAPRRGVALPYPTLQVGQVTAHATVLGAAMLPFKETLF
>Mature_384_residues
PSLFANAAIRSHYRRRSDGQAAGSSERLLLDLIRRAGQFERADLPRASGLSVPGIKGIVDPLVAHGLLQLRPSLRRGRGQ
PSAQVSLVPGYAYSVGVSVMVDGFAVVLIDFAGQVRGMRQLTAFPLTLAVVRARLPALVEALLRTAGVDRQHVFGVGLSM
TGPRIGDGTRVNPPLSLAAEWMQVELDRFVADCLQLPVWMDNDAHCAALAEAVYGIGRQSPDLVYLSISDGFAAGVIAAG
NVRRGAHGNVGELGRISAITGMARPTLESLRQALVADGHALPDLYTMLQHYDAAWPQIDAWLDAVQPTVTLAVAAIIALI
DPRVIVFGARLPTDLAQRLIARIAFEPAPRRGVALPYPTLQVGQVTAHATVLGAAMLPFKETLF

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 41112; Mature: 40981

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLFANAAIRSHYRRRSDGQAAGSSERLLLDLIRRAGQFERADLPRASGLSVPGIKGIV
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
DPLVAHGLLQLRPSLRRGRGQPSAQVSLVPGYAYSVGVSVMVDGFAVVLIDFAGQVRGMR
HHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLTAFPLTLAVVRARLPALVEALLRTAGVDRQHVFGVGLSMTGPRIGDGTRVNPPLSLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHH
EWMQVELDRFVADCLQLPVWMDNDAHCAALAEAVYGIGRQSPDLVYLSISDGFAAGVIAA
HHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEC
GNVRRGAHGNVGELGRISAITGMARPTLESLRQALVADGHALPDLYTMLQHYDAAWPQID
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
AWLDAVQPTVTLAVAAIIALIDPRVIVFGARLPTDLAQRLIARIAFEPAPRRGVALPYPT
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LQVGQVTAHATVLGAAMLPFKETLF
CCCCHHHHHHHHHHHHHHCHHHHCC
>Mature Secondary Structure 
PSLFANAAIRSHYRRRSDGQAAGSSERLLLDLIRRAGQFERADLPRASGLSVPGIKGIV
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
DPLVAHGLLQLRPSLRRGRGQPSAQVSLVPGYAYSVGVSVMVDGFAVVLIDFAGQVRGMR
HHHHHHHHHHHCHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLTAFPLTLAVVRARLPALVEALLRTAGVDRQHVFGVGLSMTGPRIGDGTRVNPPLSLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHH
EWMQVELDRFVADCLQLPVWMDNDAHCAALAEAVYGIGRQSPDLVYLSISDGFAAGVIAA
HHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEC
GNVRRGAHGNVGELGRISAITGMARPTLESLRQALVADGHALPDLYTMLQHYDAAWPQID
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
AWLDAVQPTVTLAVAAIIALIDPRVIVFGARLPTDLAQRLIARIAFEPAPRRGVALPYPT
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LQVGQVTAHATVLGAAMLPFKETLF
CCCCHHHHHHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]