| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240832
Identifier: 21240832
GI number: 21240832
Start: 71477
End: 71965
Strand: Reverse
Name: 21240832
Synonym: XAC0058
Alternate gene names: NA
Gene position: 71965-71477 (Counterclockwise)
Preceding gene: 21240833
Following gene: 21240831
Centisome position: 1.39
GC content: 72.19
Gene sequence:
>489_bases ATGCCCCGCCTGCTCGTGCGCGGCTGCCGCATGCTTGCGGCCGTCGGCCGGCTGCCCCGGTTCGAACGGCTGCTGCTGGT GCCGGCCTGGGTTCTGTTGGGCCTGGTGCGTGCGGCAGTGCGCTGGCTTGGCTTCCGCCGCCTCGCGCCCTGGCTAGGCG ACCAGGTGTCCGTGCCACCGGCACTGCCAGGCCTGGATGCACGTGCTGAACGTCGCGCCCTGCAGATCGGCCGGACCGTC CGTCTGGCGGCCCGCTACACCTACTGGGACTCCAATTGTCTGGCGCAGGCGCTGGCCGCACATTACCTGCTGGGCTTGTT CCGGGTCGCCCATTTGCTGTGCCTGGGGGTGACGCGCAGCGACGATGGCGCGCAACTGCAGGCGCATGCCTGGGTGCTCG CTGGTAGCGCGCGCGTCACCGGGGGCCGCGCGAGCGAGCGGTTCACCCGCGTCGGCTGCTTCGTGCCGCGCGCACGGCAG GCCCGATGA
Upstream 100 bases:
>100_bases AGGCACCGCAGCCGCGTCTGCTCGCGCGCACCGCCATCGACGCCGAGACCGCCGTGCTGCGCCAGCGGTCCGCAGCGCGC GCGGACCGCTGGCAGTGAGC
Downstream 100 bases:
>100_bases GGGTCGTGCACGGCATGGCGCGCCTGTTGCGGTGGGCGCCAGGTCGCCAGCGACTCGGGCTGTTCGTGCTGATGGTGCTG GCCGGCGCGACGGAGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPRLLVRGCRMLAAVGRLPRFERLLLVPAWVLLGLVRAAVRWLGFRRLAPWLGDQVSVPPALPGLDARAERRALQIGRTV RLAARYTYWDSNCLAQALAAHYLLGLFRVAHLLCLGVTRSDDGAQLQAHAWVLAGSARVTGGRASERFTRVGCFVPRARQ AR
Sequences:
>Translated_162_residues MPRLLVRGCRMLAAVGRLPRFERLLLVPAWVLLGLVRAAVRWLGFRRLAPWLGDQVSVPPALPGLDARAERRALQIGRTV RLAARYTYWDSNCLAQALAAHYLLGLFRVAHLLCLGVTRSDDGAQLQAHAWVLAGSARVTGGRASERFTRVGCFVPRARQ AR >Mature_161_residues PRLLVRGCRMLAAVGRLPRFERLLLVPAWVLLGLVRAAVRWLGFRRLAPWLGDQVSVPPALPGLDARAERRALQIGRTVR LAARYTYWDSNCLAQALAAHYLLGLFRVAHLLCLGVTRSDDGAQLQAHAWVLAGSARVTGGRASERFTRVGCFVPRARQA R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17960; Mature: 17829
Theoretical pI: Translated: 12.25; Mature: 12.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLLVRGCRMLAAVGRLPRFERLLLVPAWVLLGLVRAAVRWLGFRRLAPWLGDQVSVPP CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ALPGLDARAERRALQIGRTVRLAARYTYWDSNCLAQALAAHYLLGLFRVAHLLCLGVTRS CCCCCCHHHHHHHHHHCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDGAQLQAHAWVLAGSARVTGGRASERFTRVGCFVPRARQAR CCCCEEEHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PRLLVRGCRMLAAVGRLPRFERLLLVPAWVLLGLVRAAVRWLGFRRLAPWLGDQVSVPP CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ALPGLDARAERRALQIGRTVRLAARYTYWDSNCLAQALAAHYLLGLFRVAHLLCLGVTRS CCCCCCHHHHHHHHHHCHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DDGAQLQAHAWVLAGSARVTGGRASERFTRVGCFVPRARQAR CCCCEEEHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA