| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is asn [H]
Identifier: 21240833
GI number: 21240833
Start: 72303
End: 74228
Strand: Reverse
Name: asn [H]
Synonym: XAC0059
Alternate gene names: 21240833
Gene position: 74228-72303 (Counterclockwise)
Preceding gene: 21240838
Following gene: 21240832
Centisome position: 1.43
GC content: 69.37
Gene sequence:
>1926_bases ATGAGTGATTTCGCCGGCGTCTGGCGGCTGGATGGCGCGCCAGTTGCGCCGGGCGACATCCAGCGTTTGGGCCAGGCGCT GGACGCGCGCGGGATAGGCCCGGTGCGTGTCTGGCAGGATGGGCCGGTCGCAATCGTGCATCGTCAACATGTCTTTACCC CGCAGGATGCCGATGAGGCGATGCCCTGGGTGGGGGCATCCGGCGCGGTCCTGGCGGCCGACGTCAGGCTGGCCGCGCGC CAGGAACTTGCGTCTGCGCTGCAGCACCCCGCCAACGTCACCCTGCCCGATGGTGTGCTGCTGCTGGAGGCCTTGCAGTG CTGGGATACCGCGGCGCTGCCGCGCCTGCACGGGTGTTATGCACTGGCGCTGTATCGGCCGGACCGGCATCGCCTCTTGC TGGCCCGCGATCCGATTGGCTTGCGTTCGCTGTTCGTGCATCGCGGACCGCACCTGATCGCATTCGCCACTCGCCTGCGG GCGCTACTGGCACTTCCGCAGGTGCCGAAAGACCTGGACGAGCGCGCCCTGGCCGACAAACTGATCATGGACCGTGCTCG ACCGGAGCGCACCATCTACCGCGCGATCGACCGGGTACCAATGGCGCATGCGGTCGTGCTGACCCCGGAGGCGACACACT GCCAGCGCTGGTGGTCGCCGCCCGAGGCCGGATCGCTGCGCTTGCGCAACGATGCCGAAGTGGAAGCTGCGGCAGCCGAG GTACTGGACCGTGCCGTGGCCGATGCGCTGCGCGCACGCGGACCGGTGGCCACCTGTCTGACCGGCGGACTGGACAGCGG TTCGATCACGCTGTCGGCAGCGCGGCAACAGGCGCCGTCGCCGTTGCTGGTGCTCACGCGTCAACCGCTGCCTGCGACTG CCGCTGCCACTGCGACCCACTACTACGACGAGTCGCCGCGCGCGCGGCGGCTGGCCGCCAGCCATCCAGGCATCGACTGG CACCTGGTCGGCGACGACGACGCGGACTGGGGCGAACACGATCCGGCATGCTGGTGGCGCGAGGGTGCGCAGCCGGTCCG TTCGCCCTCGAACATGGCCTGGTTCTTCCCGCTGTACCGGTTCCTGCACGCACGCGGGAGCCAGGTGATGCTGGGCGGCG AACTGGGCAACGCCTTCTTCAGCTACGACGGCCTGTTGCGTCTGCCGCAGCTGGCGCGTCAGCGGCAATGGCGTGTGCTG GCCGGACAGGTCGGTGCACTTGCCGGCAGCCTCGGCCTGAGTCGGCGCAAGACCGTGCAGCGCTATCTGCTGCGCCCTTT CGCGCCGGTTGCGCTGCTGCGCCTGTGGCATGGCCTGCCTGCCGCGGTCTGGGAAGCGCAGGCTGCATTGCAGCCGGCAC TGGCGCAGTCGCTTGGGATGCAGCAGTCGCTGGATCGGTCCAGATACCGGTTGCGCCTCGGCGGCGGCCACACGTCCCTG CCGACCTTCCGCGAGTGGATGCTGGGCGATGCCGGTCCGATGGACCTGGTCAACACGCTGCGCGCGGTGTCCGGGGTCGA CACGCGTTATCCGCTTGCAGACCGACGGGTGATCGAATTCTTCGGCAGCCTGCCGTTGGATCAATTCCTGCGCGATGGTG TCAGCCGGTCGTTGCCACGCCGCTTGCTGGCCGCACGCGGCGCGCCGCCGGAGATCCACGCCAACCGTGCGGTCGGCGTG CAACAAGGCGACTGGTTCGCGCGGTTGAATGCGCAGCGCGATGCGCTGCACGCGCAACTGAGCCAAGCGCGCACTTCGCC GCTGGCCAATCGGGTCGTGGACCTGCAGCGCTTGCAGGCGCTGCTGGACCACTGGCCGCAGGATGCCGCAGCGGCCGAAG CGCGCCGCTTTGAGTACTTGCAGCTGCTGGCGTCCGGCTTGCAGATGGCGGGTTTCCTGGCCTGGCACGAGCGCGGCGGC GCGTGA
Upstream 100 bases:
>100_bases CTTCCTGTCGATCGATGAAACGGCGAGCAACGCAACCGTGGGCGACGACGGCAACGGTACGTTTACCGGCTCCTGAGCCT GATCGGCATCACCTGGCGTC
Downstream 100 bases:
>100_bases GTACGGTGCATGCCCGAGCCAGCAGCAGCTGGATCCTGGTGGACGATGCGCCGTGATCGAAGCCACACCCGCACGCCCGG CTTGCCCGCGCTGGCGTTTG
Product: asparagine synthetase like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MSDFAGVWRLDGAPVAPGDIQRLGQALDARGIGPVRVWQDGPVAIVHRQHVFTPQDADEAMPWVGASGAVLAADVRLAAR QELASALQHPANVTLPDGVLLLEALQCWDTAALPRLHGCYALALYRPDRHRLLLARDPIGLRSLFVHRGPHLIAFATRLR ALLALPQVPKDLDERALADKLIMDRARPERTIYRAIDRVPMAHAVVLTPEATHCQRWWSPPEAGSLRLRNDAEVEAAAAE VLDRAVADALRARGPVATCLTGGLDSGSITLSAARQQAPSPLLVLTRQPLPATAAATATHYYDESPRARRLAASHPGIDW HLVGDDDADWGEHDPACWWREGAQPVRSPSNMAWFFPLYRFLHARGSQVMLGGELGNAFFSYDGLLRLPQLARQRQWRVL AGQVGALAGSLGLSRRKTVQRYLLRPFAPVALLRLWHGLPAAVWEAQAALQPALAQSLGMQQSLDRSRYRLRLGGGHTSL PTFREWMLGDAGPMDLVNTLRAVSGVDTRYPLADRRVIEFFGSLPLDQFLRDGVSRSLPRRLLAARGAPPEIHANRAVGV QQGDWFARLNAQRDALHAQLSQARTSPLANRVVDLQRLQALLDHWPQDAAAAEARRFEYLQLLASGLQMAGFLAWHERGG A
Sequences:
>Translated_641_residues MSDFAGVWRLDGAPVAPGDIQRLGQALDARGIGPVRVWQDGPVAIVHRQHVFTPQDADEAMPWVGASGAVLAADVRLAAR QELASALQHPANVTLPDGVLLLEALQCWDTAALPRLHGCYALALYRPDRHRLLLARDPIGLRSLFVHRGPHLIAFATRLR ALLALPQVPKDLDERALADKLIMDRARPERTIYRAIDRVPMAHAVVLTPEATHCQRWWSPPEAGSLRLRNDAEVEAAAAE VLDRAVADALRARGPVATCLTGGLDSGSITLSAARQQAPSPLLVLTRQPLPATAAATATHYYDESPRARRLAASHPGIDW HLVGDDDADWGEHDPACWWREGAQPVRSPSNMAWFFPLYRFLHARGSQVMLGGELGNAFFSYDGLLRLPQLARQRQWRVL AGQVGALAGSLGLSRRKTVQRYLLRPFAPVALLRLWHGLPAAVWEAQAALQPALAQSLGMQQSLDRSRYRLRLGGGHTSL PTFREWMLGDAGPMDLVNTLRAVSGVDTRYPLADRRVIEFFGSLPLDQFLRDGVSRSLPRRLLAARGAPPEIHANRAVGV QQGDWFARLNAQRDALHAQLSQARTSPLANRVVDLQRLQALLDHWPQDAAAAEARRFEYLQLLASGLQMAGFLAWHERGG A >Mature_640_residues SDFAGVWRLDGAPVAPGDIQRLGQALDARGIGPVRVWQDGPVAIVHRQHVFTPQDADEAMPWVGASGAVLAADVRLAARQ ELASALQHPANVTLPDGVLLLEALQCWDTAALPRLHGCYALALYRPDRHRLLLARDPIGLRSLFVHRGPHLIAFATRLRA LLALPQVPKDLDERALADKLIMDRARPERTIYRAIDRVPMAHAVVLTPEATHCQRWWSPPEAGSLRLRNDAEVEAAAAEV LDRAVADALRARGPVATCLTGGLDSGSITLSAARQQAPSPLLVLTRQPLPATAAATATHYYDESPRARRLAASHPGIDWH LVGDDDADWGEHDPACWWREGAQPVRSPSNMAWFFPLYRFLHARGSQVMLGGELGNAFFSYDGLLRLPQLARQRQWRVLA GQVGALAGSLGLSRRKTVQRYLLRPFAPVALLRLWHGLPAAVWEAQAALQPALAQSLGMQQSLDRSRYRLRLGGGHTSLP TFREWMLGDAGPMDLVNTLRAVSGVDTRYPLADRRVIEFFGSLPLDQFLRDGVSRSLPRRLLAARGAPPEIHANRAVGVQ QGDWFARLNAQRDALHAQLSQARTSPLANRVVDLQRLQALLDHWPQDAAAAEARRFEYLQLLASGLQMAGFLAWHERGGA
Specific function: Asparagine synthetase involved in sporulation [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 70472; Mature: 70341
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFAGVWRLDGAPVAPGDIQRLGQALDARGIGPVRVWQDGPVAIVHRQHVFTPQDADEA CCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCCHHHC MPWVGASGAVLAADVRLAARQELASALQHPANVTLPDGVLLLEALQCWDTAALPRLHGCY CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCEE ALALYRPDRHRLLLARDPIGLRSLFVHRGPHLIAFATRLRALLALPQVPKDLDERALADK EEEEECCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LIMDRARPERTIYRAIDRVPMAHAVVLTPEATHCQRWWSPPEAGSLRLRNDAEVEAAAAE HHHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHH VLDRAVADALRARGPVATCLTGGLDSGSITLSAARQQAPSPLLVLTRQPLPATAAATATH HHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHCCCCCEEEEECCCCCCHHHHHHHH YYDESPRARRLAASHPGIDWHLVGDDDADWGEHDPACWWREGAQPVRSPSNMAWFFPLYR HCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHH FLHARGSQVMLGGELGNAFFSYDGLLRLPQLARQRQWRVLAGQVGALAGSLGLSRRKTVQ HHHCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RYLLRPFAPVALLRLWHGLPAAVWEAQAALQPALAQSLGMQQSLDRSRYRLRLGGGHTSL HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEECCCCCCC PTFREWMLGDAGPMDLVNTLRAVSGVDTRYPLADRRVIEFFGSLPLDQFLRDGVSRSLPR HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLLAARGAPPEIHANRAVGVQQGDWFARLNAQRDALHAQLSQARTSPLANRVVDLQRLQA HHHHHCCCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LLDHWPQDAAAAEARRFEYLQLLASGLQMAGFLAWHERGGA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDFAGVWRLDGAPVAPGDIQRLGQALDARGIGPVRVWQDGPVAIVHRQHVFTPQDADEA CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCCHHHC MPWVGASGAVLAADVRLAARQELASALQHPANVTLPDGVLLLEALQCWDTAALPRLHGCY CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCEE ALALYRPDRHRLLLARDPIGLRSLFVHRGPHLIAFATRLRALLALPQVPKDLDERALADK EEEEECCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LIMDRARPERTIYRAIDRVPMAHAVVLTPEATHCQRWWSPPEAGSLRLRNDAEVEAAAAE HHHHHCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHH VLDRAVADALRARGPVATCLTGGLDSGSITLSAARQQAPSPLLVLTRQPLPATAAATATH HHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEHHHCCCCCEEEEECCCCCCHHHHHHHH YYDESPRARRLAASHPGIDWHLVGDDDADWGEHDPACWWREGAQPVRSPSNMAWFFPLYR HCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHH FLHARGSQVMLGGELGNAFFSYDGLLRLPQLARQRQWRVLAGQVGALAGSLGLSRRKTVQ HHHCCCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RYLLRPFAPVALLRLWHGLPAAVWEAQAALQPALAQSLGMQQSLDRSRYRLRLGGGHTSL HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCEEEEECCCCCCC PTFREWMLGDAGPMDLVNTLRAVSGVDTRYPLADRRVIEFFGSLPLDQFLRDGVSRSLPR HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH RLLAARGAPPEIHANRAVGVQQGDWFARLNAQRDALHAQLSQARTSPLANRVVDLQRLQA HHHHHCCCCCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LLDHWPQDAAAAEARRFEYLQLLASGLQMAGFLAWHERGGA HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377; 10498721 [H]