| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240827
Identifier: 21240827
GI number: 21240827
Start: 65102
End: 65941
Strand: Reverse
Name: 21240827
Synonym: XAC0053
Alternate gene names: NA
Gene position: 65941-65102 (Counterclockwise)
Preceding gene: 21240828
Following gene: 21240826
Centisome position: 1.27
GC content: 62.98
Gene sequence:
>840_bases TTGTCTGTATGGAAAGTGCTGCCTGCAATTGCGTTAGCGCGTCCCCAGCCCGGATACTCCCACTGCGGTCTCCCCGTTCT TGCGAAGGTGTCTGGCTTGTCTGCGACGACCATTGAACGCCTCAAGTTCGCCTATCGTCGGTTGCGCGTCGGCGCGAACC TGCACCGTAACGATGCGCTCGGCGCGCTGTTTCGGGCATGGGCGTATACACATGCCACGCAGCTGACGGGCGACTACTAC GAGTTCGGCGTCTATCGCGGCAACAGTCTCGCTCACGCGTGGCTGTGCTACCGCCATCACCGACGCCATCTCGAGCGCAG TGCGCGATTGCCCTACCGTCGGCAGGGAACGGTGTCGGCGTTTCTGGCGCAGCGTCCACGGTTCTACGGTTTCGATACGT TTGCCGGGATGCCGGCCAATCTGGAAGGCGAAGACAGCTTGGCGGGCGGCAGCTTTCTCGCCTCACTGGCCCAGGCCCAG GCACGCTGTGCCGCCGTTGGTTTGAAAGCACCGGATCTGCAGCTGGTGCAAGGCTTGTTCGCCGACAATGCTGCAGCCAT CGGCCACACGCACGCAGCAATCGTGCATGTGGATTGCGATCTCTACAGCTCGGCACACGACGCACTGACCTTGATCGCAC CGCGTCTGGTGCAGGGCAGTGTGCTGCTGTGCGACGACTACGATCTGTTTCGCGCCGACAACCGACAGGGCGAACGCCGG GCGCTACAGGAATGCGCGGACCACGTCGGCATCGCATTTGAGCCCTGGTTTGCCTATGGCGCCGCCTCGCGCGCTTTTCT GTGCCATGTACCGACGCCTGCATCCGCCGCGCAGCCATGA
Upstream 100 bases:
>100_bases GGTCTGCTCAGTGCGTAAATCCGGCGCCATACCGACCAGGCATTCACCGCCGCATAGGCGCTGCAGCCCCTTAGCTTTGG CGCTGGCCAAATGCGCCCGA
Downstream 100 bases:
>100_bases TCGCCGCGCAACGCATGCGCGCGGGGTTCGTTGCCGGCGCAGTGCTGTATGCGCTCGGTCAGGGCTGCGCGCTGCTATTC CAGTGGCCGTTGCTACGTCG
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSVWKVLPAIALARPQPGYSHCGLPVLAKVSGLSATTIERLKFAYRRLRVGANLHRNDALGALFRAWAYTHATQLTGDYY EFGVYRGNSLAHAWLCYRHHRRHLERSARLPYRRQGTVSAFLAQRPRFYGFDTFAGMPANLEGEDSLAGGSFLASLAQAQ ARCAAVGLKAPDLQLVQGLFADNAAAIGHTHAAIVHVDCDLYSSAHDALTLIAPRLVQGSVLLCDDYDLFRADNRQGERR ALQECADHVGIAFEPWFAYGAASRAFLCHVPTPASAAQP
Sequences:
>Translated_279_residues MSVWKVLPAIALARPQPGYSHCGLPVLAKVSGLSATTIERLKFAYRRLRVGANLHRNDALGALFRAWAYTHATQLTGDYY EFGVYRGNSLAHAWLCYRHHRRHLERSARLPYRRQGTVSAFLAQRPRFYGFDTFAGMPANLEGEDSLAGGSFLASLAQAQ ARCAAVGLKAPDLQLVQGLFADNAAAIGHTHAAIVHVDCDLYSSAHDALTLIAPRLVQGSVLLCDDYDLFRADNRQGERR ALQECADHVGIAFEPWFAYGAASRAFLCHVPTPASAAQP >Mature_278_residues SVWKVLPAIALARPQPGYSHCGLPVLAKVSGLSATTIERLKFAYRRLRVGANLHRNDALGALFRAWAYTHATQLTGDYYE FGVYRGNSLAHAWLCYRHHRRHLERSARLPYRRQGTVSAFLAQRPRFYGFDTFAGMPANLEGEDSLAGGSFLASLAQAQA RCAAVGLKAPDLQLVQGLFADNAAAIGHTHAAIVHVDCDLYSSAHDALTLIAPRLVQGSVLLCDDYDLFRADNRQGERRA LQECADHVGIAFEPWFAYGAASRAFLCHVPTPASAAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30548; Mature: 30417
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWKVLPAIALARPQPGYSHCGLPVLAKVSGLSATTIERLKFAYRRLRVGANLHRNDAL CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH GALFRAWAYTHATQLTGDYYEFGVYRGNSLAHAWLCYRHHRRHLERSARLPYRRQGTVSA HHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH FLAQRPRFYGFDTFAGMPANLEGEDSLAGGSFLASLAQAQARCAAVGLKAPDLQLVQGLF HHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ADNAAAIGHTHAAIVHVDCDLYSSAHDALTLIAPRLVQGSVLLCDDYDLFRADNRQGERR HCCCHHCCCCEEEEEEEECHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHCCCCCCHHHH ALQECADHVGIAFEPWFAYGAASRAFLCHVPTPASAAQP HHHHHHHHCCCEECHHHHHCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure SVWKVLPAIALARPQPGYSHCGLPVLAKVSGLSATTIERLKFAYRRLRVGANLHRNDAL CHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH GALFRAWAYTHATQLTGDYYEFGVYRGNSLAHAWLCYRHHRRHLERSARLPYRRQGTVSA HHHHHHHHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH FLAQRPRFYGFDTFAGMPANLEGEDSLAGGSFLASLAQAQARCAAVGLKAPDLQLVQGLF HHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ADNAAAIGHTHAAIVHVDCDLYSSAHDALTLIAPRLVQGSVLLCDDYDLFRADNRQGERR HCCCHHCCCCEEEEEEEECHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHCCCCCCHHHH ALQECADHVGIAFEPWFAYGAASRAFLCHVPTPASAAQP HHHHHHHHCCCEECHHHHHCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA