| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240826
Identifier: 21240826
GI number: 21240826
Start: 63759
End: 65141
Strand: Reverse
Name: 21240826
Synonym: XAC0052
Alternate gene names: NA
Gene position: 65141-63759 (Counterclockwise)
Preceding gene: 21240827
Following gene: 21240825
Centisome position: 1.26
GC content: 68.62
Gene sequence:
>1383_bases GTGCCATGTACCGACGCCTGCATCCGCCGCGCAGCCATGATCGCCGCGCAACGCATGCGCGCGGGGTTCGTTGCCGGCGC AGTGCTGTATGCGCTCGGTCAGGGCTGCGCGCTGCTATTCCAGTGGCCGTTGCTACGTCGGTTCGGCCTGCAGGGCTATG GCGACGTAGGGCTGGCGCATCTTGGCTTGGTCACTGTGCTGTTCCTGGCCGATCTGGGCTATGCCTCGCTCTTTCTGCGC GAGGATCCTGCGGCACCTGGCTGGAACGCGCGTTGGCGCCAGGCGCTGTGGCACCGCTTGCTCGCCACCTTGGTGCTGGA TCTGCTGTGGATCGCCGGCGTCTGGTGGTCCGGTCGCGGCCAAGGCGAAGGGTTCCGCTATCTGCTGGCGGCGCTCTCGG CGACGGTGTTTGGCTTGGTGGGCTATTCGGCGCCGCTGCTCGCCCGCGGGCGGATGCTGGCCGGATTCATCGTGCAGCAG GTGGCGATGCCGGCGACGATCCTCGCCTGGTTCGTGCTGCAACAGCTGCCAGGCTGGGACGGCGGGCTTGGCGCCGGGCT GGCTGTCAGCTTGGGCTATCTACTGCAGGCCCTGGTCAACATCGCCGTGTTCGGTGCACCGCTGCAGTTGCTATGGCCGC GTCGCGGTGGCGGCCGGCGCATGCTGCGCCCCGCGCTGCAACTGTCCTTGCTGAGCATCGCCGGCACCTTGCACGATCGG TTGACACCGCTCTTGCTGGCGTCGGTCGCGCCGGCATTTTTGCCGGTGTATTTGTTCCTGAACTATCTGCTCAATGGGGC CAGTGGTGTATTCAACCAGTTCAACCGCCTTTTGGTGGCCGACGCGCGCGGCCCGGCCGGGGAACACTGGGCAGGCGCGC TGGTCTCGTTGGTGCTGGGCGCAGCCGCTGTGGGCGCGTTGGCGCTGCTGGTGGTTGCAGCCGCCTGGGGCAGCGCCGAG CAGCGCGCGTGGCTGCCATGGGTCACCCCGGTACTGGCCGCAGGCGCGACCACACTACTCAGCAGCGTGCTGGCGGCCTT GCTGATCGGACGCCATCGCGAAGCGACGATGGTTCCGTTGTTGTTGGGCGGCGCGCTCTGCAGCGCGCTCCTGCAGGTCG CGGCAGCGGCGGCGCATGCACCACAGTGGATGCTATGGCTGCGATTCCTGTGCGTGCTCGCCATGGCGGCGGCGAGTCTG CACCTGTGCGGGCTGCGCTTGAACGCCGGCGGCTACGCGGCCCTGCTGTCGGCGGTGCTCGCGGTCTCGCTCGGTGGCGG CCCGGTGACCATGACACTGGCGGCGTTGTTGCTGGTGCCGGTGGCGTGGACGGTATGGCAGCGCCGCAGCCTGCTGCACA CCACGTTGTCAGCGCGCGCGTGA
Upstream 100 bases:
>100_bases ACCGACAGGGCGAACGCCGGGCGCTACAGGAATGCGCGGACCACGTCGGCATCGCATTTGAGCCCTGGTTTGCCTATGGC GCCGCCTCGCGCGCTTTTCT
Downstream 100 bases:
>100_bases TGCATGATTGCGCCTTGATTGCGATGTTCTGCTTTCGGCATCGGGGGCCATCATGTGCGGCATAGTCGCGCTGCGCAGCT TCGTTGCGGAGGCGCCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MPCTDACIRRAAMIAAQRMRAGFVAGAVLYALGQGCALLFQWPLLRRFGLQGYGDVGLAHLGLVTVLFLADLGYASLFLR EDPAAPGWNARWRQALWHRLLATLVLDLLWIAGVWWSGRGQGEGFRYLLAALSATVFGLVGYSAPLLARGRMLAGFIVQQ VAMPATILAWFVLQQLPGWDGGLGAGLAVSLGYLLQALVNIAVFGAPLQLLWPRRGGGRRMLRPALQLSLLSIAGTLHDR LTPLLLASVAPAFLPVYLFLNYLLNGASGVFNQFNRLLVADARGPAGEHWAGALVSLVLGAAAVGALALLVVAAAWGSAE QRAWLPWVTPVLAAGATTLLSSVLAALLIGRHREATMVPLLLGGALCSALLQVAAAAAHAPQWMLWLRFLCVLAMAAASL HLCGLRLNAGGYAALLSAVLAVSLGGGPVTMTLAALLLVPVAWTVWQRRSLLHTTLSARA
Sequences:
>Translated_460_residues MPCTDACIRRAAMIAAQRMRAGFVAGAVLYALGQGCALLFQWPLLRRFGLQGYGDVGLAHLGLVTVLFLADLGYASLFLR EDPAAPGWNARWRQALWHRLLATLVLDLLWIAGVWWSGRGQGEGFRYLLAALSATVFGLVGYSAPLLARGRMLAGFIVQQ VAMPATILAWFVLQQLPGWDGGLGAGLAVSLGYLLQALVNIAVFGAPLQLLWPRRGGGRRMLRPALQLSLLSIAGTLHDR LTPLLLASVAPAFLPVYLFLNYLLNGASGVFNQFNRLLVADARGPAGEHWAGALVSLVLGAAAVGALALLVVAAAWGSAE QRAWLPWVTPVLAAGATTLLSSVLAALLIGRHREATMVPLLLGGALCSALLQVAAAAAHAPQWMLWLRFLCVLAMAAASL HLCGLRLNAGGYAALLSAVLAVSLGGGPVTMTLAALLLVPVAWTVWQRRSLLHTTLSARA >Mature_459_residues PCTDACIRRAAMIAAQRMRAGFVAGAVLYALGQGCALLFQWPLLRRFGLQGYGDVGLAHLGLVTVLFLADLGYASLFLRE DPAAPGWNARWRQALWHRLLATLVLDLLWIAGVWWSGRGQGEGFRYLLAALSATVFGLVGYSAPLLARGRMLAGFIVQQV AMPATILAWFVLQQLPGWDGGLGAGLAVSLGYLLQALVNIAVFGAPLQLLWPRRGGGRRMLRPALQLSLLSIAGTLHDRL TPLLLASVAPAFLPVYLFLNYLLNGASGVFNQFNRLLVADARGPAGEHWAGALVSLVLGAAAVGALALLVVAAAWGSAEQ RAWLPWVTPVLAAGATTLLSSVLAALLIGRHREATMVPLLLGGALCSALLQVAAAAAHAPQWMLWLRFLCVLAMAAASLH LCGLRLNAGGYAALLSAVLAVSLGGGPVTMTLAALLLVPVAWTVWQRRSLLHTTLSARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48607; Mature: 48476
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCTDACIRRAAMIAAQRMRAGFVAGAVLYALGQGCALLFQWPLLRRFGLQGYGDVGLAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH LGLVTVLFLADLGYASLFLREDPAAPGWNARWRQALWHRLLATLVLDLLWIAGVWWSGRG HHHHHHHHHHHCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QGEGFRYLLAALSATVFGLVGYSAPLLARGRMLAGFIVQQVAMPATILAWFVLQQLPGWD CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGLGAGLAVSLGYLLQALVNIAVFGAPLQLLWPRRGGGRRMLRPALQLSLLSIAGTLHDR CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LTPLLLASVAPAFLPVYLFLNYLLNGASGVFNQFNRLLVADARGPAGEHWAGALVSLVLG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHH AAAVGALALLVVAAAWGSAEQRAWLPWVTPVLAAGATTLLSSVLAALLIGRHREATMVPL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLGGALCSALLQVAAAAAHAPQWMLWLRFLCVLAMAAASLHLCGLRLNAGGYAALLSAVL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHH AVSLGGGPVTMTLAALLLVPVAWTVWQRRSLLHTTLSARA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PCTDACIRRAAMIAAQRMRAGFVAGAVLYALGQGCALLFQWPLLRRFGLQGYGDVGLAH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH LGLVTVLFLADLGYASLFLREDPAAPGWNARWRQALWHRLLATLVLDLLWIAGVWWSGRG HHHHHHHHHHHCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QGEGFRYLLAALSATVFGLVGYSAPLLARGRMLAGFIVQQVAMPATILAWFVLQQLPGWD CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GGLGAGLAVSLGYLLQALVNIAVFGAPLQLLWPRRGGGRRMLRPALQLSLLSIAGTLHDR CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LTPLLLASVAPAFLPVYLFLNYLLNGASGVFNQFNRLLVADARGPAGEHWAGALVSLVLG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHH AAAVGALALLVVAAAWGSAEQRAWLPWVTPVLAAGATTLLSSVLAALLIGRHREATMVPL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLGGALCSALLQVAAAAAHAPQWMLWLRFLCVLAMAAASLHLCGLRLNAGGYAALLSAVL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHH AVSLGGGPVTMTLAALLLVPVAWTVWQRRSLLHTTLSARA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA