Click here to switch to the map view.

The map label for this gene is wcaJ [H]

Identifier: 21240817

GI number: 21240817

Start: 52524

End: 53933

Strand: Direct

Name: wcaJ [H]

Synonym: XAC0043

Alternate gene names: 21240817

Gene position: 52524-53933 (Clockwise)

Preceding gene: 21240816

Following gene: 21240818

Centisome position: 1.01

GC content: 66.52

Gene sequence:

>1410_bases
ATGAGCGCGCTCGATCCACTGCTGCCGCGTGTCGCCATCGCGCCCAGGCGCTCCGGCGATCTGCTTGGGTCGGTTGCCGG
TCTGGCGAAGATCGCCGACATGGGCGTCGTGGTCGGCAGCGGCTTGCTTGCCTATGCCATGCGGGTCGGTCGACCTGCGT
GGCCGGAGGCGCCCCGCTATGCCGACGCGCTGCTCGCCGCCGCAGCACTTACGCTACTGGTGTTCGGGCGCCTCTCGCTC
TACCGGCAACGGCCGCACCTGGCAGCGACGATGGTGGCCGGGCGCGTGTTGACCGGGTGGGCAATCGTGCTGAGCGTGTT
GATGTCGATCGGCTTTCTGAGCGCAACCGGTGCGGGATTCTCGCGGCTGTGGTTTCTGTACTGGGCTGGATGCGGCGGTG
CCGGTCTGCTCTGCGTGCGGTCTGCAATGAAGGGGGCGCTTGCCTGGCTGCATCGACACGGTATCGGGCGCCGGCGCATC
GCGCTACTCGGGCCACCCGAACGCAGCGACGCGTTGGTGGCAAGCGTCCAGCAGCACCCATGTGCGGGGGTCGAACTAGT
GCAGGTGCCATCCGAACTGGCGCTTGGTGGCACGGCCGGGCTGTCCTGCTGGCTGGAAGCTCGGCACGTCGGCGAAGTGT
GGGTGACATGGCCGATGCGCGAAGAGGCCCAACTTCGCTCCAGCATCGCGCAACTGGATGCCTGCTGCGTGGACGCCTGC
TGGATTCCGGACCTGTTCGCATTTCGCCCGGGGGAGTCCTGCCTGGAGGAGATGACCGGCCTGCCGATGGTGGCATTGTC
TGTGCGCCCGCTGACGGGCCTGTCGCGCGTGCTGAAGGAGGCGACCGAGCGTGTGCTGGCTTGCGCCATCGTGCTAGCGA
GCGCACCGCTCATGCTGGCCCTGGCCGCGGGCGTCAAGCTCTCCGGTCCTGGACCGGTGTTATTCCGGCAGATACGGCAG
GGTTGGGATGGCCGCCCGTTCGAATTGTGGAAGTTCCGCAGCATGCAGGTCCACGATGCGGCGACCGCCGCACCGCAGAC
CAGCCGCGGGGATCAACGAGTCACGCGCTTCGGCGCCTTCCTGCGACGCACCAGCCTGGACGAATTGCCGCAATTCCTCA
ACGTGCTTCAGGGGCACATGGCCATCGTCGGGCCGCGCCCGCATGCGCTGGCGCACAACGCTCAATATCAGGAATTGGTG
CCGAACTACCTGCAACGCCAGCGGGTCAAGCCGGGCATCACCGGCTGGGCGCAGGTCAATGGCCTGCGCGGCGAGACCGA
TACGCTGGAAAAGATGCGCAGCCGCGTTCAACACGATCTCGCTTACATCCAGCATTGGTCGCTTTGGCTGGATATGAGCA
TCATCGCGCAGACCTGCGTGATCGTGCTGTTCGACCGCGACGCCTACTGA

Upstream 100 bases:

>100_bases
CGGAGCTGCCACTCTTGGAGAAAAGCAGGGATGAAGGGAGAGGGATGCTGATCGACCCATTCGCAGGCGTGCCGGTCCAC
CTCCGCGCTGCGGTCGACGA

Downstream 100 bases:

>100_bases
ACTCGGATCCGGAAGTCCCATGCACATCACTTATGTCCTCGGTACCCGCCCGGAAATCATCAAGCTGGCATCGCTGATCG
CGGCCAGTCTGCGCGATGGA

Product: UDP-glucose lipid carrier transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSALDPLLPRVAIAPRRSGDLLGSVAGLAKIADMGVVVGSGLLAYAMRVGRPAWPEAPRYADALLAAAALTLLVFGRLSL
YRQRPHLAATMVAGRVLTGWAIVLSVLMSIGFLSATGAGFSRLWFLYWAGCGGAGLLCVRSAMKGALAWLHRHGIGRRRI
ALLGPPERSDALVASVQQHPCAGVELVQVPSELALGGTAGLSCWLEARHVGEVWVTWPMREEAQLRSSIAQLDACCVDAC
WIPDLFAFRPGESCLEEMTGLPMVALSVRPLTGLSRVLKEATERVLACAIVLASAPLMLALAAGVKLSGPGPVLFRQIRQ
GWDGRPFELWKFRSMQVHDAATAAPQTSRGDQRVTRFGAFLRRTSLDELPQFLNVLQGHMAIVGPRPHALAHNAQYQELV
PNYLQRQRVKPGITGWAQVNGLRGETDTLEKMRSRVQHDLAYIQHWSLWLDMSIIAQTCVIVLFDRDAY

Sequences:

>Translated_469_residues
MSALDPLLPRVAIAPRRSGDLLGSVAGLAKIADMGVVVGSGLLAYAMRVGRPAWPEAPRYADALLAAAALTLLVFGRLSL
YRQRPHLAATMVAGRVLTGWAIVLSVLMSIGFLSATGAGFSRLWFLYWAGCGGAGLLCVRSAMKGALAWLHRHGIGRRRI
ALLGPPERSDALVASVQQHPCAGVELVQVPSELALGGTAGLSCWLEARHVGEVWVTWPMREEAQLRSSIAQLDACCVDAC
WIPDLFAFRPGESCLEEMTGLPMVALSVRPLTGLSRVLKEATERVLACAIVLASAPLMLALAAGVKLSGPGPVLFRQIRQ
GWDGRPFELWKFRSMQVHDAATAAPQTSRGDQRVTRFGAFLRRTSLDELPQFLNVLQGHMAIVGPRPHALAHNAQYQELV
PNYLQRQRVKPGITGWAQVNGLRGETDTLEKMRSRVQHDLAYIQHWSLWLDMSIIAQTCVIVLFDRDAY
>Mature_468_residues
SALDPLLPRVAIAPRRSGDLLGSVAGLAKIADMGVVVGSGLLAYAMRVGRPAWPEAPRYADALLAAAALTLLVFGRLSLY
RQRPHLAATMVAGRVLTGWAIVLSVLMSIGFLSATGAGFSRLWFLYWAGCGGAGLLCVRSAMKGALAWLHRHGIGRRRIA
LLGPPERSDALVASVQQHPCAGVELVQVPSELALGGTAGLSCWLEARHVGEVWVTWPMREEAQLRSSIAQLDACCVDACW
IPDLFAFRPGESCLEEMTGLPMVALSVRPLTGLSRVLKEATERVLACAIVLASAPLMLALAAGVKLSGPGPVLFRQIRQG
WDGRPFELWKFRSMQVHDAATAAPQTSRGDQRVTRFGAFLRRTSLDELPQFLNVLQGHMAIVGPRPHALAHNAQYQELVP
NYLQRQRVKPGITGWAQVNGLRGETDTLEKMRSRVQHDLAYIQHWSLWLDMSIIAQTCVIVLFDRDAY

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=420, Percent_Identity=42.3809523809524, Blast_Score=316, Evalue=2e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 51053; Mature: 50922

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALDPLLPRVAIAPRRSGDLLGSVAGLAKIADMGVVVGSGLLAYAMRVGRPAWPEAPRY
CCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ADALLAAAALTLLVFGRLSLYRQRPHLAATMVAGRVLTGWAIVLSVLMSIGFLSATGAGF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SRLWFLYWAGCGGAGLLCVRSAMKGALAWLHRHGIGRRRIALLGPPERSDALVASVQQHP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCC
CAGVELVQVPSELALGGTAGLSCWLEARHVGEVWVTWPMREEAQLRSSIAQLDACCVDAC
CCCCCCEECCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
WIPDLFAFRPGESCLEEMTGLPMVALSVRPLTGLSRVLKEATERVLACAIVLASAPLMLA
CCCHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAGVKLSGPGPVLFRQIRQGWDGRPFELWKFRSMQVHDAATAAPQTSRGDQRVTRFGAF
HHCCCEECCCCHHHHHHHHCCCCCCCCHHHHHCCCEEHHHHHCCCCCCCCHHHHHHHHHH
LRRTSLDELPQFLNVLQGHMAIVGPRPHALAHNAQYQELVPNYLQRQRVKPGITGWAQVN
HHHCCHHHHHHHHHHHHCCEEEECCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCC
GLRGETDTLEKMRSRVQHDLAYIQHWSLWLDMSIIAQTCVIVLFDRDAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
SALDPLLPRVAIAPRRSGDLLGSVAGLAKIADMGVVVGSGLLAYAMRVGRPAWPEAPRY
CCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ADALLAAAALTLLVFGRLSLYRQRPHLAATMVAGRVLTGWAIVLSVLMSIGFLSATGAGF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SRLWFLYWAGCGGAGLLCVRSAMKGALAWLHRHGIGRRRIALLGPPERSDALVASVQQHP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCC
CAGVELVQVPSELALGGTAGLSCWLEARHVGEVWVTWPMREEAQLRSSIAQLDACCVDAC
CCCCCCEECCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
WIPDLFAFRPGESCLEEMTGLPMVALSVRPLTGLSRVLKEATERVLACAIVLASAPLMLA
CCCHHHHCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAGVKLSGPGPVLFRQIRQGWDGRPFELWKFRSMQVHDAATAAPQTSRGDQRVTRFGAF
HHCCCEECCCCHHHHHHHHCCCCCCCCHHHHHCCCEEHHHHHCCCCCCCCHHHHHHHHHH
LRRTSLDELPQFLNVLQGHMAIVGPRPHALAHNAQYQELVPNYLQRQRVKPGITGWAQVN
HHHCCHHHHHHHHHHHHCCEEEECCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCC
GLRGETDTLEKMRSRVQHDLAYIQHWSLWLDMSIIAQTCVIVLFDRDAY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]