| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21240814
Identifier: 21240814
GI number: 21240814
Start: 49519
End: 50031
Strand: Reverse
Name: 21240814
Synonym: XAC0040
Alternate gene names: NA
Gene position: 50031-49519 (Counterclockwise)
Preceding gene: 21240819
Following gene: 21240812
Centisome position: 0.97
GC content: 66.08
Gene sequence:
>513_bases ATGCTCCTCGTAGCGACCAGCTCAGTCTACCCGCTGCCGGAGACCGCGGCGACCGAAGCGATCTCCGTGGCCACGCCGAC GTCCATCCATGCAGGCTGCGCGGTATCTTCACCCAAGGAGCGCGTCGGTCATGGAAAAAATCCATCCGGCCGGCGCAGCG ACCAACGTCAGGGCCGCGCGTGGAGCAATCCGCTGCATTGCACAACGGCGAGCCGGTCAACCTGCCGTCTGTGCTTATCG GCGCATGTCGGCGCGCTAGCTCACTCGGACATGCGTGCGGCTGCCGGACAACGCCGGCAGCCCGGTGGCCTTGCCCGTAG CCAGGCGATGCTGTCAGGCAGCCTGGCCGATCCGGCCCAGGGCGCCAGCGAAAACGGCAGTCATCAGTTCATCGTCGGGA CCGGGCCGAACGATCGCGGCCCCGCAATGTATCGCGGCCACGTAGTGGCAGATGGCCTCGCTCCACACCCGTGCTGCCGC CTGGATTTGTCGATACTTCATCGGCGATCGTAA
Upstream 100 bases:
>100_bases ATCAGGGCCGGCGGCAGGCGTCAGCGCGGCTGCCCGGGGAGCGCTGTGGCATAGGCCATCTAGCGATACCTGGATATAAC GACGGGCATCGGCCCATTCC
Downstream 100 bases:
>100_bases GGATCGCTATCGCCCTACCCCTTCAACACCAGCGACATGTCCGGATAGCGGGCGCAGATGAAATCCACGAAGGCACGCAC TTTCGGCGCTGCCAGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLLVATSSVYPLPETAATEAISVATPTSIHAGCAVSSPKERVGHGKNPSGRRSDQRQGRAWSNPLHCTTASRSTCRLCLS AHVGALAHSDMRAAAGQRRQPGGLARSQAMLSGSLADPAQGASENGSHQFIVGTGPNDRGPAMYRGHVVADGLAPHPCCR LDLSILHRRS
Sequences:
>Translated_170_residues MLLVATSSVYPLPETAATEAISVATPTSIHAGCAVSSPKERVGHGKNPSGRRSDQRQGRAWSNPLHCTTASRSTCRLCLS AHVGALAHSDMRAAAGQRRQPGGLARSQAMLSGSLADPAQGASENGSHQFIVGTGPNDRGPAMYRGHVVADGLAPHPCCR LDLSILHRRS >Mature_170_residues MLLVATSSVYPLPETAATEAISVATPTSIHAGCAVSSPKERVGHGKNPSGRRSDQRQGRAWSNPLHCTTASRSTCRLCLS AHVGALAHSDMRAAAGQRRQPGGLARSQAMLSGSLADPAQGASENGSHQFIVGTGPNDRGPAMYRGHVVADGLAPHPCCR LDLSILHRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17722; Mature: 17722
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVATSSVYPLPETAATEAISVATPTSIHAGCAVSSPKERVGHGKNPSGRRSDQRQGRA CEEEECCCCCCCCCCHHHCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCC WSNPLHCTTASRSTCRLCLSAHVGALAHSDMRAAAGQRRQPGGLARSQAMLSGSLADPAQ CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC GASENGSHQFIVGTGPNDRGPAMYRGHVVADGLAPHPCCRLDLSILHRRS CCCCCCCEEEEEECCCCCCCCCEEECEEEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLLVATSSVYPLPETAATEAISVATPTSIHAGCAVSSPKERVGHGKNPSGRRSDQRQGRA CEEEECCCCCCCCCCHHHCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCC WSNPLHCTTASRSTCRLCLSAHVGALAHSDMRAAAGQRRQPGGLARSQAMLSGSLADPAQ CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCC GASENGSHQFIVGTGPNDRGPAMYRGHVVADGLAPHPCCRLDLSILHRRS CCCCCCCEEEEEECCCCCCCCCEEECEEEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA