Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21240810

Identifier: 21240810

GI number: 21240810

Start: 45728

End: 46072

Strand: Reverse

Name: 21240810

Synonym: XAC0036

Alternate gene names: NA

Gene position: 46072-45728 (Counterclockwise)

Preceding gene: 21240812

Following gene: 21240808

Centisome position: 0.89

GC content: 66.96

Gene sequence:

>345_bases
ATGATCCGTATCCTCGCCCCACTCGCTGCCGCTGCGTTGTTGTCGGCCTGTGCCTCCAACCAGGTCGCGCAGATACAGCC
CATCGATGGCGCCATCTCCGGCCAGTGCCATAGCGACAAGGTGCGTGGTGCGGTAGGTCTGGCGGCAGCCGCGCAGACCA
TCGAACGTGCGCGCGTGGATAGCGACAGCCAGACGGTCATCGTCCGTCGCGGCGAGCGCGCAACCGGTGGCACCACCGCC
AGCGGCCTGGCCGATCCGGCCCAGGGCGCCAGCGAAAGCGGCGGCGATCAGCTCACCATCGAAACCGGCCCGAACAACAG
CATCACGGCGATCTATTGCGGTTGA

Upstream 100 bases:

>100_bases
GCGGCGATGTCTGTTTCTGAAAGGCTGTGGCGCAGCATCTTCATGCCATCCCGACAACGCCACCTTCACGCTTGCGGCAT
TCTTGCCCTGGAGATTCCCG

Downstream 100 bases:

>100_bases
TTGTTGCGACTCGGGATTCGGGAAAGCATTGCGGATTTCCGGCTCCCGGGTCTGCCGTTGCATTGACTGACAACGATATC
GAGCGATCGCCGGCGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIRILAPLAAAALLSACASNQVAQIQPIDGAISGQCHSDKVRGAVGLAAAAQTIERARVDSDSQTVIVRRGERATGGTTA
SGLADPAQGASESGGDQLTIETGPNNSITAIYCG

Sequences:

>Translated_114_residues
MIRILAPLAAAALLSACASNQVAQIQPIDGAISGQCHSDKVRGAVGLAAAAQTIERARVDSDSQTVIVRRGERATGGTTA
SGLADPAQGASESGGDQLTIETGPNNSITAIYCG
>Mature_114_residues
MIRILAPLAAAALLSACASNQVAQIQPIDGAISGQCHSDKVRGAVGLAAAAQTIERARVDSDSQTVIVRRGERATGGTTA
SGLADPAQGASESGGDQLTIETGPNNSITAIYCG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11376; Mature: 11376

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRILAPLAAAALLSACASNQVAQIQPIDGAISGQCHSDKVRGAVGLAAAAQTIERARVD
CEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
SDSQTVIVRRGERATGGTTASGLADPAQGASESGGDQLTIETGPNNSITAIYCG
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEC
>Mature Secondary Structure
MIRILAPLAAAALLSACASNQVAQIQPIDGAISGQCHSDKVRGAVGLAAAAQTIERARVD
CEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
SDSQTVIVRRGERATGGTTASGLADPAQGASESGGDQLTIETGPNNSITAIYCG
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA