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The map label for this gene is 21240809

Identifier: 21240809

GI number: 21240809

Start: 44433

End: 45521

Strand: Direct

Name: 21240809

Synonym: XAC0035

Alternate gene names: NA

Gene position: 44433-45521 (Clockwise)

Preceding gene: 21240805

Following gene: 21240811

Centisome position: 0.86

GC content: 65.01

Gene sequence:

>1089_bases
GTGGCAAGCGCGGCAGCGGTGGCGCAGGCCAAGGCGACCGCGCGAGCGGCCGGGCTGACCTATGTCAACGATCAACAGCC
CGGCATCAGCCGCCGCAAGGCCGGCAAGAGCTTCAGTTACCGCGATGCCGACGGGCAACGCATTGCCGATGCCGAGACCT
TGCAGCGCATCCGTTCGCTGGCGATTCCGCCGGCCTATACCGAAGTGTGGATCTGCGCCAAGCCCAATGGCCATCTGCAG
GCCACCGGGCGCGATGCGCGGCGGCGCAAGCAATACCGCTATCACGCCGATTGGGCGCTCGTGCGTGGCGAAGGCAAGTT
CGAACGCGTGATCGCCTTCGGCACCGCGCTGCCCAAACTGCGGCGGCGGTTGCGTCGCGATCTGCTGCTGCCGGGATTTC
CACGCGAAAAGGTGTTGGCGATCGTGGTGGCGTTGCTGGCCGACACCCTGGTGCGCGTCGGCAATGCCGAATACGCGCGC
AGCAATCGTTCGTACGGACTGACCACACTGCGCAACCGGCACATGGAATTTCTGAAAGGCGGACGCGCGCGGCTGAAGTT
CCGCGGCAAGAGCGGCCAGGACCACGATATCGAAGTGGACGACAAGCAGCTGGTCAAACTGATCCGGCAATGCCAGCAGC
TGCCGGGGCAATCGCTGTTCCAGTACCGCGACGACGATGGCCAGTTGCAGCCGGTGGATTCGGGTGAGGTCAACGACTAT
CTACGCGAGGCGATGGGCGAAGACTTCACCGCCAAGGATTTCCGCACCTGGGGCGGCACCTTGGCTGCATTGCAGCGGCT
GGCACGCCTGCCATTGCCCGAGCGTAGCAGCGAACGCGCGTTGACGCAGGTGCAGAACGATGTCATCCGTGAGGTAGCCG
ATGCCTTGGGCAACACGCCCTCGGTGTGTCGCAAGGCCTACATCGACCCATGCGTCTTCGAAGGCTGGCGTGCGGGCCAG
CTGCAGGCCATGGCCACCGGTGTGCGTGGCGAGCGCCAGTGGGAAGCGGCCACGCTGAGGTTCTTGAGCGCTTCGCGTAG
CAAGCTCAAGGCACAGGCAAAGCCGGCGTCGAAGCGGAAGTCCGCATAG

Upstream 100 bases:

>100_bases
AATGAAAGCAAAACGTGTTCTTCGCAATGCCACAGTGGCCGCCAGTACCGCCGGCAAGCTCGCGGCGGTCGCCACCGGCG
CGGCTGTCGCCACAGCCGCC

Downstream 100 bases:

>100_bases
AAGCGGAATCCGTAGAATTGCCGTCAACGACCACTGCGCTTGCCAGCAGATGAGCGCTGCCGCTGCTCGGTGCGATGTAC
TGCGCACGCCGCGCTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase I-Like Protein; DNA poisomerasei; -Like DNA poisomerase I; DNA poisomerase ; Type I DNA poisomerase; Eukaryotic-Like DNA poisomerase I

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIADAETLQRIRSLAIPPAYTEVWICAKPNGHLQ
ATGRDARRRKQYRYHADWALVRGEGKFERVIAFGTALPKLRRRLRRDLLLPGFPREKVLAIVVALLADTLVRVGNAEYAR
SNRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDY
LREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGQ
LQAMATGVRGERQWEAATLRFLSASRSKLKAQAKPASKRKSA

Sequences:

>Translated_362_residues
MASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIADAETLQRIRSLAIPPAYTEVWICAKPNGHLQ
ATGRDARRRKQYRYHADWALVRGEGKFERVIAFGTALPKLRRRLRRDLLLPGFPREKVLAIVVALLADTLVRVGNAEYAR
SNRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDY
LREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGQ
LQAMATGVRGERQWEAATLRFLSASRSKLKAQAKPASKRKSA
>Mature_361_residues
ASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIADAETLQRIRSLAIPPAYTEVWICAKPNGHLQA
TGRDARRRKQYRYHADWALVRGEGKFERVIAFGTALPKLRRRLRRDLLLPGFPREKVLAIVVALLADTLVRVGNAEYARS
NRSYGLTTLRNRHMEFLKGGRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDYL
REAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALTQVQNDVIREVADALGNTPSVCRKAYIDPCVFEGWRAGQL
QAMATGVRGERQWEAATLRFLSASRSKLKAQAKPASKRKSA

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40507; Mature: 40375

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIADAETLQRIRSL
CCCHHHHHHHHHHHHHHCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AIPPAYTEVWICAKPNGHLQATGRDARRRKQYRYHADWALVRGEGKFERVIAFGTALPKL
CCCCCCCEEEEEECCCCCEEECCHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHHHHH
RRRLRRDLLLPGFPREKVLAIVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEFLKG
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHC
GRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDY
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHH
LREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALTQVQNDVIREVADALGNTP
HHHHHCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
SVCRKAYIDPCVFEGWRAGQLQAMATGVRGERQWEAATLRFLSASRSKLKAQAKPASKRK
HHHHHHHCCHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SA
CC
>Mature Secondary Structure 
ASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIADAETLQRIRSL
CCHHHHHHHHHHHHHHCCEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
AIPPAYTEVWICAKPNGHLQATGRDARRRKQYRYHADWALVRGEGKFERVIAFGTALPKL
CCCCCCCEEEEEECCCCCEEECCHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHHHHH
RRRLRRDLLLPGFPREKVLAIVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEFLKG
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHC
GRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGEVNDY
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHH
LREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALTQVQNDVIREVADALGNTP
HHHHHCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
SVCRKAYIDPCVFEGWRAGQLQAMATGVRGERQWEAATLRFLSASRSKLKAQAKPASKRK
HHHHHHHCCHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA