| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is quiP [H]
Identifier: 21240811
GI number: 21240811
Start: 46368
End: 47507
Strand: Direct
Name: quiP [H]
Synonym: XAC0037
Alternate gene names: 21240811
Gene position: 46368-47507 (Clockwise)
Preceding gene: 21240809
Following gene: 21240813
Centisome position: 0.9
GC content: 64.91
Gene sequence:
>1140_bases TTGACCGCTGGGGCGTGGCGCACCTCTATGCAAAGACCGACAACGACGCGTTCTTCGTGCAAGGCTTCAATGTGGCGCGC GACCGCTTGGTTCAGCTGGATCTGCTGCGTCGCAAAGGCCTGGGCCACCTGTCGGAAGCGTTCGGGCCAACCTATGTGGC GCAGGATCGTGCCGCGCGGCTGTTTCTGTATCAGCACCGCATTGCCGTGGTCGGAGAATCCCAAAGCCGGCTTCATCACC ACGTCCAACGAAATGAATCTGCCCCGCGACGATCCGGTTGCGCAGCGCAAACTCGGTTTCGAGTGGGCCAACGACGCACG CCATGCGCGCATCATCCAGGTGCTTTCGCAGCTGCCCAAGCCAAGGTTGGAGGATTCGGAAAAGTTGCAGAACGATCAGG TCTCGTTGCCCGCGCAGCGCCTGGTCGCGTTGCTGCAACCGCTGCAGTCGCACGACCCTGACACCAGCGCCGCGCTCGCG TTGCTGCGTCCCTGGAATGGCGACGCCAGCGCCGCGTCTGCCGCAGCCGCGCTGGAGGAAGTCTGGTTCAGTCGCTATCT CGGCGATGCCTACAAGGCGTTGCGATTGCGCCCATCGGAAGCCGCCAGCTTCGGCGCGCCGGATGCTGCGGCCATGCTGG ATGCGCTGGAACATCCCGGCGCGGCGTTCGGCGCCACTCCGGCCGCACGCCGCGACCAACTGCTGCTGGAGTCGTTGCGC AACGCGTATCACGCATTGGGCTCCCTGCAAGGCCCCGATACCAGGCAGTGGCAGTGGGGCAACTTGCATACCAACAAGAT CGCGCATGCGATGAGCGCGGTGGCCGGTGCCGACCGCGCCTTGCTCGATGTCGGCCCGTTTGCCAAGGGCGGTAGCCCGT ACACGCCCAATCAATCCAGCTACGACCCTGCCGACTTTCGCCAGACCATCGGCCCGTCCGCACGCCTGATCATCGACCTG AGCAACTGGGACAACGCGCGCGCCATGAATTTCCCAGGCCAGTCCGGCGACCCGGCCAGCCCGCACTATCGCGACCTCGC ACCGCTCTGGCTAAACGGCAGCTACTTCCCGCTGCTGTATACGCGCGCTGCGGTGGATGCGGCAACCGAACAGATCTTCG ACCTGGTGCCGGCGCAGTAG
Upstream 100 bases:
>100_bases CCCCGCACTGCGCTGGCGCCGACAGCTGGGCGTGCAGCGGCCGCACCCAACCAGGCCACCCTGACGGTGGCAGGTCTCGG GCAGCCGGCGCAGATCCGCA
Downstream 100 bases:
>100_bases CGCAACGTCGAGTGACCCGAGGCAACGCACATTGCGCAGCAAGTACCAAAACGTCTCCGCGCTTGCTGCACCGCATGCAA TCACGCTTTCGCGGTCGCCT
Product: penicillin acylase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTAGAWRTSMQRPTTTRSSCKASMWRATAWFSWICCVAKAWATCRKRSGQPMWRRIVPRGCFCISTALPWSENPKAGFIT TSNEMNLPRDDPVAQRKLGFEWANDARHARIIQVLSQLPKPRLEDSEKLQNDQVSLPAQRLVALLQPLQSHDPDTSAALA LLRPWNGDASAASAAAALEEVWFSRYLGDAYKALRLRPSEAASFGAPDAAAMLDALEHPGAAFGATPAARRDQLLLESLR NAYHALGSLQGPDTRQWQWGNLHTNKIAHAMSAVAGADRALLDVGPFAKGGSPYTPNQSSYDPADFRQTIGPSARLIIDL SNWDNARAMNFPGQSGDPASPHYRDLAPLWLNGSYFPLLYTRAAVDAATEQIFDLVPAQ
Sequences:
>Translated_379_residues MTAGAWRTSMQRPTTTRSSCKASMWRATAWFSWICCVAKAWATCRKRSGQPMWRRIVPRGCFCISTALPWSENPKAGFIT TSNEMNLPRDDPVAQRKLGFEWANDARHARIIQVLSQLPKPRLEDSEKLQNDQVSLPAQRLVALLQPLQSHDPDTSAALA LLRPWNGDASAASAAAALEEVWFSRYLGDAYKALRLRPSEAASFGAPDAAAMLDALEHPGAAFGATPAARRDQLLLESLR NAYHALGSLQGPDTRQWQWGNLHTNKIAHAMSAVAGADRALLDVGPFAKGGSPYTPNQSSYDPADFRQTIGPSARLIIDL SNWDNARAMNFPGQSGDPASPHYRDLAPLWLNGSYFPLLYTRAAVDAATEQIFDLVPAQ >Mature_378_residues TAGAWRTSMQRPTTTRSSCKASMWRATAWFSWICCVAKAWATCRKRSGQPMWRRIVPRGCFCISTALPWSENPKAGFITT SNEMNLPRDDPVAQRKLGFEWANDARHARIIQVLSQLPKPRLEDSEKLQNDQVSLPAQRLVALLQPLQSHDPDTSAALAL LRPWNGDASAASAAAALEEVWFSRYLGDAYKALRLRPSEAASFGAPDAAAMLDALEHPGAAFGATPAARRDQLLLESLRN AYHALGSLQGPDTRQWQWGNLHTNKIAHAMSAVAGADRALLDVGPFAKGGSPYTPNQSSYDPADFRQTIGPSARLIIDLS NWDNARAMNFPGQSGDPASPHYRDLAPLWLNGSYFPLLYTRAAVDAATEQIFDLVPAQ
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 41582; Mature: 41451
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGAWRTSMQRPTTTRSSCKASMWRATAWFSWICCVAKAWATCRKRSGQPMWRRIVPRG CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC CFCISTALPWSENPKAGFITTSNEMNLPRDDPVAQRKLGFEWANDARHARIIQVLSQLPK CEEEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCC PRLEDSEKLQNDQVSLPAQRLVALLQPLQSHDPDTSAALALLRPWNGDASAASAAAALEE CCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHHHH VWFSRYLGDAYKALRLRPSEAASFGAPDAAAMLDALEHPGAAFGATPAARRDQLLLESLR HHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH NAYHALGSLQGPDTRQWQWGNLHTNKIAHAMSAVAGADRALLDVGPFAKGGSPYTPNQSS HHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC YDPADFRQTIGPSARLIIDLSNWDNARAMNFPGQSGDPASPHYRDLAPLWLNGSYFPLLY CCHHHHHHHCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCHHCCCCEEECCCCHHHHH TRAAVDAATEQIFDLVPAQ HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAGAWRTSMQRPTTTRSSCKASMWRATAWFSWICCVAKAWATCRKRSGQPMWRRIVPRG CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC CFCISTALPWSENPKAGFITTSNEMNLPRDDPVAQRKLGFEWANDARHARIIQVLSQLPK CEEEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCC PRLEDSEKLQNDQVSLPAQRLVALLQPLQSHDPDTSAALALLRPWNGDASAASAAAALEE CCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCHHHHHHHHHHHH VWFSRYLGDAYKALRLRPSEAASFGAPDAAAMLDALEHPGAAFGATPAARRDQLLLESLR HHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH NAYHALGSLQGPDTRQWQWGNLHTNKIAHAMSAVAGADRALLDVGPFAKGGSPYTPNQSS HHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC YDPADFRQTIGPSARLIIDLSNWDNARAMNFPGQSGDPASPHYRDLAPLWLNGSYFPLLY CCHHHHHHHCCCCEEEEEEECCCCCCCEECCCCCCCCCCCCCHHCCCCEEECCCCHHHHH TRAAVDAATEQIFDLVPAQ HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]