| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21240795
Identifier: 21240795
GI number: 21240795
Start: 22773
End: 23093
Strand: Direct
Name: 21240795
Synonym: XAC0021
Alternate gene names: NA
Gene position: 22773-23093 (Clockwise)
Preceding gene: 21240794
Following gene: 21240796
Centisome position: 0.44
GC content: 60.12
Gene sequence:
>321_bases ATGTCCAAGTCTCTGTACAAAGTCACCTTCCTCAATCATGGCAAGGTGTACGAGCTCTACGCGCGTGAGGTCACCGGCAG CCATCTGTGGGGCTTCAACCAGATCGGCGAGCTGGTGTTCGACGTGCACGACGGGCTGGTGGTGGACCCCACCGAAGAAC GCCTGCGCGAGGAATTCGGCAATACCAGGACCTTGCACCTGCCGATGCAGAGCATCGTGCGGATCGAAGAAGTCGAGAAA AAGGGCCAGTCGGTGATTCGCGATGCCACCACCGGCGACAAGGTGGTCACCCCGTTCCCCTCGCCGATCAAGCCACGCTG A
Upstream 100 bases:
>100_bases GCGCACCGGCTGTACCCGCAGGCCGCAACCCGGGCGTGGCCCAGTTACCGGCACGATGCCGCGCATGTCGCTGTCCAGGC GCGCGCCTATAATCGTGGGC
Downstream 100 bases:
>100_bases TGCGCATTGTGGTGCCCGACGACTACCAGGGCGCCGTTGCGCAGCTGCCCTGCCTGCAGCAACTGCAGGACCACCAGGTG CAGGTGCTGGGCGCGTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Conserved In Bacteria
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSKSLYKVTFLNHGKVYELYAREVTGSHLWGFNQIGELVFDVHDGLVVDPTEERLREEFGNTRTLHLPMQSIVRIEEVEK KGQSVIRDATTGDKVVTPFPSPIKPR
Sequences:
>Translated_106_residues MSKSLYKVTFLNHGKVYELYAREVTGSHLWGFNQIGELVFDVHDGLVVDPTEERLREEFGNTRTLHLPMQSIVRIEEVEK KGQSVIRDATTGDKVVTPFPSPIKPR >Mature_105_residues SKSLYKVTFLNHGKVYELYAREVTGSHLWGFNQIGELVFDVHDGLVVDPTEERLREEFGNTRTLHLPMQSIVRIEEVEKK GQSVIRDATTGDKVVTPFPSPIKPR
Specific function: Unknown
COG id: COG4517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12111; Mature: 11980
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSLYKVTFLNHGKVYELYAREVTGSHLWGFNQIGELVFDVHDGLVVDPTEERLREEFG CCCCEEEEEEECCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHC NTRTLHLPMQSIVRIEEVEKKGQSVIRDATTGDKVVTPFPSPIKPR CCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC >Mature Secondary Structure SKSLYKVTFLNHGKVYELYAREVTGSHLWGFNQIGELVFDVHDGLVVDPTEERLREEFG CCCEEEEEEECCCCEEEEEEHHCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHC NTRTLHLPMQSIVRIEEVEKKGQSVIRDATTGDKVVTPFPSPIKPR CCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA