| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is thrB [H]
Identifier: 161485716
GI number: 161485716
Start: 2116674
End: 2117687
Strand: Direct
Name: thrB [H]
Synonym: XAC1821
Alternate gene names: 161485716
Gene position: 2116674-2117687 (Clockwise)
Preceding gene: 21242564
Following gene: 77748613
Centisome position: 40.9
GC content: 66.57
Gene sequence:
>1014_bases GTGACGCATGCTGTTGTCAGCCAGGCCGGCGTGAGCCAGGCGGCGGTGGCGCAGGGGCAGGGCAGCGATCACGCTTCCCT GGGCAAGCACGGCTTGCACGAAGCGCGCGCCTTCGCGCCGGCATCGGTTGCGAATGTCGCGGTGGGATTCGATCTGCTCG GCTATCCGATCGATGGAGTCGGCGACACAGTGACCGTGCGCCGTATCGACGCGCCAGTGGTGCGCATCGCTGCGATTCGC GGCACGACGGTGGCGCTGCCACTGGATGCCGAGCGCAACACTGCAGGCGCTGCACTCATTTCGCTGCGTGCCGCCTTGCA ACTGCCTTATGGATTCGAAATCGAGATCGACAAAGGCATCGCGTTGAGCTCGGGCATGGGCGGGTCTGCCGCGTCATGCG TCGCGGCGTTGGTGGCGGCAAACGCGCTGCTGGCCTCGCCGTTGGATCACCACCAGCTCTACCAATACGCGCTCGATGGC GAAGCGGTGGCCAGCGGCAGCTGCCACGGCGACAACCTGGGGCCGCTGTTTGTCGGTGGCTTGGTGCTGTGCACGCTGGA GCGCCTGGTACCGATCGCGGTGCCGCCAGCGTGGCATAGCCTGCTGGTGCATCCGGATGCAGTGCTGGAAACGCGGCGCG CGCGCGAAGCCTTGGCAGGAAACTATCAATTGCGCGAATTCGTCGCGCAGAGCACCAATCTGGCGTTGGTGTTGGCCGGT TGCCATGGCGGCGATGCAGACCTGGTACGCGCAGGCTTGCGTGATGTGCTGATCGAACCGCGTCGCGCCCCATTGATCGC CGGCTTCGCCGAAGCCAAACAGGCAGCGCTGGACCACAACGCCTTCGGCGCCAGCATTTCCGGCGCCGGGCCGAGCGTGT TTGCCTGGTTCGAATCGCGCGCCGCGGCCGAAGCTGCGGCACCGGCAGTGCAGGCCGGGTTTGCGGCCGTAGGGTTCGAT AGCCAGGCCTGGGTCTCGCCGATCGCAAGTCCTGCGGCGCGGTTGCTCGAATGA
Upstream 100 bases:
>100_bases ACCCGTTGGTGGTGCAGGGCCCGGGTGCCGGTCCGGAAGTGACCGCGGCAGGCGTGTTCGCCGATCTGCTGCGCGTGGCG GCAGGCGAGGGCGCGCGGCT
Downstream 100 bases:
>100_bases ATCGGGACGCACGCAATGACAACGCGCCGCAGGCAGCCGGTAGCAGGTCTGGCCTGCAGCTTGCCACACGTCATTTAGTC GACGACGACTTCGCTGATCT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTHAVVSQAGVSQAAVAQGQGSDHASLGKHGLHEARAFAPASVANVAVGFDLLGYPIDGVGDTVTVRRIDAPVVRIAAIR GTTVALPLDAERNTAGAALISLRAALQLPYGFEIEIDKGIALSSGMGGSAASCVAALVAANALLASPLDHHQLYQYALDG EAVASGSCHGDNLGPLFVGGLVLCTLERLVPIAVPPAWHSLLVHPDAVLETRRAREALAGNYQLREFVAQSTNLALVLAG CHGGDADLVRAGLRDVLIEPRRAPLIAGFAEAKQAALDHNAFGASISGAGPSVFAWFESRAAAEAAAPAVQAGFAAVGFD SQAWVSPIASPAARLLE
Sequences:
>Translated_337_residues MTHAVVSQAGVSQAAVAQGQGSDHASLGKHGLHEARAFAPASVANVAVGFDLLGYPIDGVGDTVTVRRIDAPVVRIAAIR GTTVALPLDAERNTAGAALISLRAALQLPYGFEIEIDKGIALSSGMGGSAASCVAALVAANALLASPLDHHQLYQYALDG EAVASGSCHGDNLGPLFVGGLVLCTLERLVPIAVPPAWHSLLVHPDAVLETRRAREALAGNYQLREFVAQSTNLALVLAG CHGGDADLVRAGLRDVLIEPRRAPLIAGFAEAKQAALDHNAFGASISGAGPSVFAWFESRAAAEAAAPAVQAGFAAVGFD SQAWVSPIASPAARLLE >Mature_336_residues THAVVSQAGVSQAAVAQGQGSDHASLGKHGLHEARAFAPASVANVAVGFDLLGYPIDGVGDTVTVRRIDAPVVRIAAIRG TTVALPLDAERNTAGAALISLRAALQLPYGFEIEIDKGIALSSGMGGSAASCVAALVAANALLASPLDHHQLYQYALDGE AVASGSCHGDNLGPLFVGGLVLCTLERLVPIAVPPAWHSLLVHPDAVLETRRAREALAGNYQLREFVAQSTNLALVLAGC HGGDADLVRAGLRDVLIEPRRAPLIAGFAEAKQAALDHNAFGASISGAGPSVFAWFESRAAAEAAAPAVQAGFAAVGFDS QAWVSPIASPAARLLE
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=282, Percent_Identity=32.9787234042553, Blast_Score=128, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 34385; Mature: 34254
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAVVSQAGVSQAAVAQGQGSDHASLGKHGLHEARAFAPASVANVAVGFDLLGYPIDGV CCCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC GDTVTVRRIDAPVVRIAAIRGTTVALPLDAERNTAGAALISLRAALQLPYGFEIEIDKGI CCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCE ALSSGMGGSAASCVAALVAANALLASPLDHHQLYQYALDGEAVASGSCHGDNLGPLFVGG EEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCCCCCCHHHHHH LVLCTLERLVPIAVPPAWHSLLVHPDAVLETRRAREALAGNYQLREFVAQSTNLALVLAG HHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEE CHGGDADLVRAGLRDVLIEPRRAPLIAGFAEAKQAALDHNAFGASISGAGPSVFAWFESR CCCCCHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHH AAAEAAAPAVQAGFAAVGFDSQAWVSPIASPAARLLE HHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure THAVVSQAGVSQAAVAQGQGSDHASLGKHGLHEARAFAPASVANVAVGFDLLGYPIDGV CCHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC GDTVTVRRIDAPVVRIAAIRGTTVALPLDAERNTAGAALISLRAALQLPYGFEIEIDKGI CCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCE ALSSGMGGSAASCVAALVAANALLASPLDHHQLYQYALDGEAVASGSCHGDNLGPLFVGG EEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCCCCCCHHHHHH LVLCTLERLVPIAVPPAWHSLLVHPDAVLETRRAREALAGNYQLREFVAQSTNLALVLAG HHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEE CHGGDADLVRAGLRDVLIEPRRAPLIAGFAEAKQAALDHNAFGASISGAGPSVFAWFESR CCCCCHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHH AAAEAAAPAVQAGFAAVGFDSQAWVSPIASPAARLLE HHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA