| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238728
Identifier: 57238728
GI number: 57238728
Start: 1366008
End: 1366550
Strand: Reverse
Name: 57238728
Synonym: CJE1468
Alternate gene names: NA
Gene position: 1366550-1366008 (Counterclockwise)
Preceding gene: 57238327
Following gene: 57238326
Centisome position: 76.87
GC content: 30.02
Gene sequence:
>543_bases ATGATAGAAGTAAAAGGCTTGAACGAATTAATGAAAGATTTGCAAAGCATAAGTAAAAAAGCTTTGCCAAATGCGGCTAA AAAAGGAGCTTTAGAAGTAGCAAAAGAAATCACAAATGATTATAAAAAGAATATTCCTAAACAAAGTGGACTTTTAAAGC AAAGTGTTAAGGCAGTTTCTAGTTATACTTTAGAAAAAGGTGTTTATCGTGCTGCTTCGGTTGTTTTTAGAATGAAAAAA GTAGGTATAAAAAGATTTGAAAAATTAAAAAATGCTAAAAAATGGACACAAGCAAAGAAAAATGAGAGAAAACAAAGAAT GGATTATTTTGCGAGTGCGTATTATGCTCATTTTATAGAGTATGGATTTTTTCATAAAGGCGGAGTGAAAAAAAGTGCAA AAGGAAAACCAAATATAAGCGGAAAAAACACTTTTGTAAAAGGCACTTATACCATGCAAAAAGCAAAAGAGAAAATAGAC CCAAAAATGCAAAGCTTGGTTACAACAAAACTAAATGCTGAGTTAGACAAATTAGGATTTTAA
Upstream 100 bases:
>100_bases GAGCCTTGGAAGAAATGAACCCAATTGATAATGGAAACGATCATTTAATACCGCTTAATCTCGCCAAAATAGATGAAAAA GACACACAAAAAGGCAATCA
Downstream 100 bases:
>100_bases ATGAAGGAATTTTTAAGCGATTTTTTAATGGGACTAAGCAAGGAATTAAATATAGAAATTTACCCACTTTCAAGGCAAAA AACAAAGCTAGAAAAAGCAT
Product: HK97 family phage protein
Products: NA
Alternate protein names: HK97 Family Phage Protein
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MIEVKGLNELMKDLQSISKKALPNAAKKGALEVAKEITNDYKKNIPKQSGLLKQSVKAVSSYTLEKGVYRAASVVFRMKK VGIKRFEKLKNAKKWTQAKKNERKQRMDYFASAYYAHFIEYGFFHKGGVKKSAKGKPNISGKNTFVKGTYTMQKAKEKID PKMQSLVTTKLNAELDKLGF
Sequences:
>Translated_180_residues MIEVKGLNELMKDLQSISKKALPNAAKKGALEVAKEITNDYKKNIPKQSGLLKQSVKAVSSYTLEKGVYRAASVVFRMKK VGIKRFEKLKNAKKWTQAKKNERKQRMDYFASAYYAHFIEYGFFHKGGVKKSAKGKPNISGKNTFVKGTYTMQKAKEKID PKMQSLVTTKLNAELDKLGF >Mature_180_residues MIEVKGLNELMKDLQSISKKALPNAAKKGALEVAKEITNDYKKNIPKQSGLLKQSVKAVSSYTLEKGVYRAASVVFRMKK VGIKRFEKLKNAKKWTQAKKNERKQRMDYFASAYYAHFIEYGFFHKGGVKKSAKGKPNISGKNTFVKGTYTMQKAKEKID PKMQSLVTTKLNAELDKLGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20378; Mature: 20378
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVKGLNELMKDLQSISKKALPNAAKKGALEVAKEITNDYKKNIPKQSGLLKQSVKAVS CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SYTLEKGVYRAASVVFRMKKVGIKRFEKLKNAKKWTQAKKNERKQRMDYFASAYYAHFIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGFFHKGGVKKSAKGKPNISGKNTFVKGTYTMQKAKEKIDPKMQSLVTTKLNAELDKLGF HHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIEVKGLNELMKDLQSISKKALPNAAKKGALEVAKEITNDYKKNIPKQSGLLKQSVKAVS CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SYTLEKGVYRAASVVFRMKKVGIKRFEKLKNAKKWTQAKKNERKQRMDYFASAYYAHFIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGFFHKGGVKKSAKGKPNISGKNTFVKGTYTMQKAKEKIDPKMQSLVTTKLNAELDKLGF HHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA