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The map label for this gene is ymfO [C]

Identifier: 57238327

GI number: 57238327

Start: 1366547

End: 1367719

Strand: Reverse

Name: ymfO [C]

Synonym: CJE1469

Alternate gene names: 57238327

Gene position: 1367719-1366547 (Counterclockwise)

Preceding gene: 57238328

Following gene: 57238728

Centisome position: 76.93

GC content: 31.12

Gene sequence:

>1173_bases
ATGTTCAATAAAATAAGATCATTATTTACAAAAAAAGCACGAAATAATGAATTTGTTAATAGCTTAGAAATTTTATTAGA
AGATAAAATAAAAGCTGAGGAACTTTCAGCAGTAATTGCCGCAATCTCAAATATTAGCGAGACCATAGCATCTTTGCCAT
TAAATTTATATCAAAGAACAACTGATGGATCAAAACTAGCCTCTAATCACCCCTTATATGAACTCATCAAAATCGCACCA
AATGAAACAATGACACCTTTTACACTCTTTGAGGCTTTTATGGTACAAATGTTAATTTATGGCAATGGTTTTTTATATCC
TGTTAAAAAAAGAAACGGGGTGATTAATTCTATAGAACTCATAGAAAATAAAGACATTAATATCTTTAAAATGAATGGAA
AGTATTTTTATCAAGCTTACTCAAAAAATGGCAGTATTGTTTTAAATTATGATGAGGTTTTAAATGTGCCTTATCATACT
AAAGATGGAGTAAAAGGTATCGCACCGCTTAGAAAAAGCAAAAATACCACAGAACTTGCAACAGCTATAGAACAGCACGG
ACTTAGCTTTTTTAAAAATGGAAGTTTTACAAGTGGCGTTATATCTGTACCAAATGAATTAAGCGAAGAGGCATATTCGA
GATTAAAACAATCCTTTAAAGAAAATTATAGCCAAAAAAAAGCTTATAATATTTCTATTTTAGAGGGTGGAGCAAGTTAT
GCACAAACTACAAGTGCGAATAAAAATAGCCAGTTTTTAGAAAGCAAACAATTTCAAGTGATAGAAATCGCAAGACTTTT
TAATATCCCACCGCACAAACTTGGAGATTTAAGTCGTGCGACTTTTTCAAATATCGAACAACAAGAGACAAATTATATGG
TGCAAACCATAACACCTCTAACAACTAAAATCGAACAAGCCCTAAATCGCTTTTTATTAAACCAAAATGAAAGAAAAGAA
TTTTATTTTAAATTCAATATCAACGCTATTTTAAGAGCTGATAGTTCTTCAAGGTGGGAAAGCTATGTAAAAGCTTTAAG
TAATGGCGTGATGAGTATAAACGAAGTAAGAGCCTTGGAAGAAATGAACCCAATTGATAATGGAAACGATCATTTAATAC
CGCTTAATCTCGCCAAAATAGATGAAAAAGACACACAAAAAGGCAATCAATGA

Upstream 100 bases:

>100_bases
ACAATTCTTATGATCACTGAGAAATTATATCATTTTTTTTATAAAACGCACTTTAACGCCTCAAACTTTTTTTAAAATAA
GTAAAAAATAAAGGTTTTGC

Downstream 100 bases:

>100_bases
TAGAAGTAAAAGGCTTGAACGAATTAATGAAAGATTTGCAAAGCATAAGTAAAAAAGCTTTGCCAAATGCGGCTAAAAAA
GGAGCTTTAGAAGTAGCAAA

Product: HK97 family portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MFNKIRSLFTKKARNNEFVNSLEILLEDKIKAEELSAVIAAISNISETIASLPLNLYQRTTDGSKLASNHPLYELIKIAP
NETMTPFTLFEAFMVQMLIYGNGFLYPVKKRNGVINSIELIENKDINIFKMNGKYFYQAYSKNGSIVLNYDEVLNVPYHT
KDGVKGIAPLRKSKNTTELATAIEQHGLSFFKNGSFTSGVISVPNELSEEAYSRLKQSFKENYSQKKAYNISILEGGASY
AQTTSANKNSQFLESKQFQVIEIARLFNIPPHKLGDLSRATFSNIEQQETNYMVQTITPLTTKIEQALNRFLLNQNERKE
FYFKFNINAILRADSSSRWESYVKALSNGVMSINEVRALEEMNPIDNGNDHLIPLNLAKIDEKDTQKGNQ

Sequences:

>Translated_390_residues
MFNKIRSLFTKKARNNEFVNSLEILLEDKIKAEELSAVIAAISNISETIASLPLNLYQRTTDGSKLASNHPLYELIKIAP
NETMTPFTLFEAFMVQMLIYGNGFLYPVKKRNGVINSIELIENKDINIFKMNGKYFYQAYSKNGSIVLNYDEVLNVPYHT
KDGVKGIAPLRKSKNTTELATAIEQHGLSFFKNGSFTSGVISVPNELSEEAYSRLKQSFKENYSQKKAYNISILEGGASY
AQTTSANKNSQFLESKQFQVIEIARLFNIPPHKLGDLSRATFSNIEQQETNYMVQTITPLTTKIEQALNRFLLNQNERKE
FYFKFNINAILRADSSSRWESYVKALSNGVMSINEVRALEEMNPIDNGNDHLIPLNLAKIDEKDTQKGNQ
>Mature_390_residues
MFNKIRSLFTKKARNNEFVNSLEILLEDKIKAEELSAVIAAISNISETIASLPLNLYQRTTDGSKLASNHPLYELIKIAP
NETMTPFTLFEAFMVQMLIYGNGFLYPVKKRNGVINSIELIENKDINIFKMNGKYFYQAYSKNGSIVLNYDEVLNVPYHT
KDGVKGIAPLRKSKNTTELATAIEQHGLSFFKNGSFTSGVISVPNELSEEAYSRLKQSFKENYSQKKAYNISILEGGASY
AQTTSANKNSQFLESKQFQVIEIARLFNIPPHKLGDLSRATFSNIEQQETNYMVQTITPLTTKIEQALNRFLLNQNERKE
FYFKFNINAILRADSSSRWESYVKALSNGVMSINEVRALEEMNPIDNGNDHLIPLNLAKIDEKDTQKGNQ

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 44255; Mature: 44255

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNKIRSLFTKKARNNEFVNSLEILLEDKIKAEELSAVIAAISNISETIASLPLNLYQRT
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
TDGSKLASNHPLYELIKIAPNETMTPFTLFEAFMVQMLIYGNGFLYPVKKRNGVINSIEL
CCCCHHCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHE
IENKDINIFKMNGKYFYQAYSKNGSIVLNYDEVLNVPYHTKDGVKGIAPLRKSKNTTELA
ECCCCCEEEEECCEEEEEEECCCCCEEEEHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHH
TAIEQHGLSFFKNGSFTSGVISVPNELSEEAYSRLKQSFKENYSQKKAYNISILEGGASY
HHHHHHCHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCH
AQTTSANKNSQFLESKQFQVIEIARLFNIPPHKLGDLSRATFSNIEQQETNYMVQTITPL
HHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCEEEEHHHHH
TTKIEQALNRFLLNQNERKEFYFKFNINAILRADSSSRWESYVKALSNGVMSINEVRALE
HHHHHHHHHHHHCCCCCCCEEEEEEECEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHH
EMNPIDNGNDHLIPLNLAKIDEKDTQKGNQ
HCCCCCCCCCCEEEEEHHHCCCHHHCCCCC
>Mature Secondary Structure
MFNKIRSLFTKKARNNEFVNSLEILLEDKIKAEELSAVIAAISNISETIASLPLNLYQRT
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
TDGSKLASNHPLYELIKIAPNETMTPFTLFEAFMVQMLIYGNGFLYPVKKRNGVINSIEL
CCCCHHCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHE
IENKDINIFKMNGKYFYQAYSKNGSIVLNYDEVLNVPYHTKDGVKGIAPLRKSKNTTELA
ECCCCCEEEEECCEEEEEEECCCCCEEEEHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHH
TAIEQHGLSFFKNGSFTSGVISVPNELSEEAYSRLKQSFKENYSQKKAYNISILEGGASY
HHHHHHCHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCH
AQTTSANKNSQFLESKQFQVIEIARLFNIPPHKLGDLSRATFSNIEQQETNYMVQTITPL
HHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCEEEEHHHHH
TTKIEQALNRFLLNQNERKEFYFKFNINAILRADSSSRWESYVKALSNGVMSINEVRALE
HHHHHHHHHHHHCCCCCCCEEEEEEECEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHH
EMNPIDNGNDHLIPLNLAKIDEKDTQKGNQ
HCCCCCCCCCCEEEEEHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA