| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238722
Identifier: 57238722
GI number: 57238722
Start: 1260399
End: 1261658
Strand: Direct
Name: 57238722
Synonym: CJE1345
Alternate gene names: NA
Gene position: 1260399-1261658 (Clockwise)
Preceding gene: 57238082
Following gene: 57238087
Centisome position: 70.9
GC content: 23.57
Gene sequence:
>1260_bases ATGTCTCTATGGAATTCTTTTTCTTACTCTTTTAAAGAATTTCATTATTTATTTTTCTCTGTTGTTGTTATTTTTATTTT TAATATCCTTTTAGAATATAATAATTTTTTAAACTTTAAAAACCAAAAACATTACCTTATAGACAACGCTCTATTAACGC ACCAATATATAAAATATAATAAAAAAAATAAAAAATACTGGGTTTTAAAGTTACAAACTGAAAACTTCACTTTTTATACT ACAAGTTTTAAGGATTTAAATTTAAGCAAGAATCAATTTTTAAGCCTTAGAATTATCACCCATAATATTAACTTTAAAGA CTATCTGAGTAAAAGTTTTTACGCACCTTCTTATGATTTTGAAAAATTAAAAGAAAAAGAATACAATCCCATTATATCTT ACTTCTTAAATCAACATACAAATGAAAAGATTAAAGAATTTTATGGTGCTTTATTTTTTGCACTGCCCATATCTTTAGAG CTTAGAAACGATGTAAATTACTACGGTATAGCACACCTTATAGCAATTAGCGGTTATCACATAGGCTTACTTTTTAGTTT AATTTTCTTTATTTTAGCTCCAATCTATAGTTTTTTCCAAAAAAGATATTTTCCTTATAGAAATTTACGTTTAGATTTAA GTATTTTAATTTTTGCACTACTTTTAGCTTATGCTTGTTTAATAGGATTTGTCCCTTCTTTTGTGCGCTCCTTGATTATG GCTTTTTGGATTTTTTATCTATTGTGTAAAAATATAAAAATCATTAATTTCGTTACGCTTTTTTGTAGTATTTTATTGTG CATTTCTCTTTACCCTAGACTTTTATTTAGTATTGGATTTTTATTTTCTATTTTAGGTGTTTTTTATATTTTTTTATATA TGCATCATTTTGCAAATAAATTTAATAATCTTATAAATATTATTTTGCTTAATATTTGGACTTTTTTTGCTATGGTTTTA CCTGTGCTTTATTTTTTTCCACTTATAAGCTACCAACAAATTTTAGGTATTATTTTGAGTGGAATTTTTGTAATATTTTA TCCTTTAGTATTATTTTTGCATCTTATAAACTATGGAGATTTGCTCAATTTTATCTTAGATGAATTTTTTAAATTTAAAA TTTATGGAACTAATATCCATATCCCATTTTGGATTTTTATAAGTTATCTTATTGCTTCTTTAATCTCTGTGCGATTTAAA TATCTAGCTTTTCTTTGTATTTTTGCGAATTTTATTCCCTTCATTATGATTGTGATTTAG
Upstream 100 bases:
>100_bases TTTTTGATAAACTGAGTTTATATCCTTATGCTGCTCCTTTATTTTTATTATTTTTAGCCGGAATAATTTGGCTTTATTTA AGTAAATTTTCTAAAAAATA
Downstream 100 bases:
>100_bases AAAATAATAGAGTTTAAGCCCAAAAAGATAAATAATCCAAGAAATATAAATCCAAATAAAAAAGAATAAAATAGTAGAAA AAGATCCATAAACGCTAGCG
Product: ComEC/Rec2 family protein
Products: NA
Alternate protein names: ComEC/Rec2-Related Protein; DNA Transfer Protein ComE; Integral Membrane Protein; DNA Uptake Protein; ComEC/Rec2 Family Protein; Comec/Rec2-Related Protein; Competence Locus E; Inner Membrane Protein OxaA; Competence Protein
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSLWNSFSYSFKEFHYLFFSVVVIFIFNILLEYNNFLNFKNQKHYLIDNALLTHQYIKYNKKNKKYWVLKLQTENFTFYT TSFKDLNLSKNQFLSLRIITHNINFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLE LRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIFALLLAYACLIGFVPSFVRSLIM AFWIFYLLCKNIKIINFVTLFCSILLCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVL PVLYFFPLISYQQILGIILSGIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIHIPFWIFISYLIASLISVRFK YLAFLCIFANFIPFIMIVI
Sequences:
>Translated_419_residues MSLWNSFSYSFKEFHYLFFSVVVIFIFNILLEYNNFLNFKNQKHYLIDNALLTHQYIKYNKKNKKYWVLKLQTENFTFYT TSFKDLNLSKNQFLSLRIITHNINFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLE LRNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIFALLLAYACLIGFVPSFVRSLIM AFWIFYLLCKNIKIINFVTLFCSILLCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVL PVLYFFPLISYQQILGIILSGIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIHIPFWIFISYLIASLISVRFK YLAFLCIFANFIPFIMIVI >Mature_418_residues SLWNSFSYSFKEFHYLFFSVVVIFIFNILLEYNNFLNFKNQKHYLIDNALLTHQYIKYNKKNKKYWVLKLQTENFTFYTT SFKDLNLSKNQFLSLRIITHNINFKDYLSKSFYAPSYDFEKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLEL RNDVNYYGIAHLIAISGYHIGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIFALLLAYACLIGFVPSFVRSLIMA FWIFYLLCKNIKIINFVTLFCSILLCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANKFNNLINIILLNIWTFFAMVLP VLYFFPLISYQQILGIILSGIFVIFYPLVLFLHLINYGDLLNFILDEFFKFKIYGTNIHIPFWIFISYLIASLISVRFKY LAFLCIFANFIPFIMIVI
Specific function: Unknown
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50175; Mature: 50043
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWNSFSYSFKEFHYLFFSVVVIFIFNILLEYNNFLNFKNQKHYLIDNALLTHQYIKYN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC KKNKKYWVLKLQTENFTFYTTSFKDLNLSKNQFLSLRIITHNINFKDYLSKSFYAPSYDF CCCCEEEEEEEEECCEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCH EKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLELRNDVNYYGIAHLIAISGYH HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHH IGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIFALLLAYACLIGFVPSFVRSLIM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWIFYLLCKNIKIINFVTLFCSILLCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNNLINIILLNIWTFFAMVLPVLYFFPLISYQQILGIILSGIFVIFYPLVLFLHLINYGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNFILDEFFKFKIYGTNIHIPFWIFISYLIASLISVRFKYLAFLCIFANFIPFIMIVI HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SLWNSFSYSFKEFHYLFFSVVVIFIFNILLEYNNFLNFKNQKHYLIDNALLTHQYIKYN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC KKNKKYWVLKLQTENFTFYTTSFKDLNLSKNQFLSLRIITHNINFKDYLSKSFYAPSYDF CCCCEEEEEEEEECCEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCCH EKLKEKEYNPIISYFLNQHTNEKIKEFYGALFFALPISLELRNDVNYYGIAHLIAISGYH HHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHH IGLLFSLIFFILAPIYSFFQKRYFPYRNLRLDLSILIFALLLAYACLIGFVPSFVRSLIM HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFWIFYLLCKNIKIINFVTLFCSILLCISLYPRLLFSIGFLFSILGVFYIFLYMHHFANK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNNLINIILLNIWTFFAMVLPVLYFFPLISYQQILGIILSGIFVIFYPLVLFLHLINYGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNFILDEFFKFKIYGTNIHIPFWIFISYLIASLISVRFKYLAFLCIFANFIPFIMIVI HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA