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The map label for this gene is yebA [H]

Identifier: 57238087

GI number: 57238087

Start: 1264644

End: 1265804

Strand: Direct

Name: yebA [H]

Synonym: CJE1350

Alternate gene names: 57238087

Gene position: 1264644-1265804 (Clockwise)

Preceding gene: 57238722

Following gene: 57238092

Centisome position: 71.13

GC content: 32.13

Gene sequence:

>1161_bases
ATGAAAAAATTATTGCTTTTATTTATTTTTGTTGTTCAAAGTTTTGCAGCTTTAAGTGTTGAAGAGCTAACTTGGGATAA
TGGAGATACCTTGCTTAAATTCTTACAAAGAAATTCCATACCTATGTCGCTTTATTATGGACTTGATAGAGAAGATCAAG
AACTTGCTTCTGATATAGCCTATAAAATAAAATATCAAGTTTTAAAAGATGAAAACAACAACATAGAACAAGTTTTAATT
CCAATTAGTGATGATTTACAAATTCATATCTATAAAGATAAAGATAGACAATACACTCTTGCTTTTACTCCTGTATCTTA
TCAAAAAGAAGATAGAATTTTACATTTAACCATTAAAAGCTCTGCTTATCAAGATGTCTATGAAGAAAGTGGTAGCAGTA
CTTTAGCTCGTGCTATGGTTCGTGCTTTTCGAGGAAGTATAAATTTTCGCAATATCCAAAAAGGTGATGAAGTAACCCTA
TATTATGAACAAAAAAGACGCATGGGTAAACTTTGGGGTGATATAAATATAAAAATGGCAATGGTAGAAATCAATAAAAG
CGCTAGAGAAGTCTTTTCTTATAATGATATATTCTATGATCGTGATGGCAAAGAATTAGAATCTTTTTTACTTACAAAAC
CTGTGAATTACACTAGAATTTCTTCTCCTTTTACAACAGCAAGATATCATCCTATATTAAAACGCTATCGTGCCCATCTT
GGTATAGACTATGCTGCACCTACTGGAACTCCTGTGAAAAGTGCTGGCAAAGGAATAGTAACCTTTATAGGCACAAAAGG
TGGTTATGGAAATGTAATTCAAATCAAGCATGACTCAGGTTATATGACTTTATATGCTCATCTTAGTCGTTTTGCAAAAA
TTAAAAACGGACAAAAGGTAAATCAAGGACAAGTAATTGCATATGTTGGTTCAACAGGTATGAGCACAGGGCCTCATTTG
CATTTTGGAGTATATTTAAACAATAAAGCTATAAATCCTGCATCTGTTGTAAAAATCGCCAAATCAGAACTTAGTGGAAA
AGCAAAAGAGAATTTTAAACATATCATAGCTGGATACGAGCAGGTTGTTAAAGAAGCCCTAGCCTCGAATCAACCTAATC
CCCCAAAAGAAGAAGATTTTGAAAACTATATAGAATTTTAA

Upstream 100 bases:

>100_bases
TTATAGAATTATAATCCTTTTTTGTTAAGCAATTGTAAGAAAAATAAAGTAAAATATAGCTTTCAAATTTCAAAATTCTT
TTAAAAATTAAGGTTATCTC

Downstream 100 bases:

>100_bases
TTACTCAACAACGCTTTATCTTTTGCATTGATTAAAGAATTTAGAAGAGTTGCAAGCTCTTCTTTTTCTTTTTCACTAAT
TTCACAAAAATCTGCATCAA

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSLYYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLI
PISDDLQIHIYKDKDRQYTLAFTPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYTRISSPFTTARYHPILKRYRAHL
GIDYAAPTGTPVKSAGKGIVTFIGTKGGYGNVIQIKHDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHL
HFGVYLNNKAINPASVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF

Sequences:

>Translated_386_residues
MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSLYYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLI
PISDDLQIHIYKDKDRQYTLAFTPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYTRISSPFTTARYHPILKRYRAHL
GIDYAAPTGTPVKSAGKGIVTFIGTKGGYGNVIQIKHDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHL
HFGVYLNNKAINPASVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF
>Mature_386_residues
MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSLYYGLDREDQELASDIAYKIKYQVLKDENNNIEQVLI
PISDDLQIHIYKDKDRQYTLAFTPVSYQKEDRILHLTIKSSAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTL
YYEQKRRMGKLWGDINIKMAMVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYTRISSPFTTARYHPILKRYRAHL
GIDYAAPTGTPVKSAGKGIVTFIGTKGGYGNVIQIKHDSGYMTLYAHLSRFAKIKNGQKVNQGQVIAYVGSTGMSTGPHL
HFGVYLNNKAINPASVVKIAKSELSGKAKENFKHIIAGYEQVVKEALASNQPNPPKEEDFENYIEF

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=340, Percent_Identity=30, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI87082174, Length=94, Percent_Identity=45.7446808510638, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 43941; Mature: 43941

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSLYYGLDREDQELASDIA
CHHHHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
YKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDRQYTLAFTPVSYQKEDRILHLTIKS
HEEEEEEEECCCCCEEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECC
SAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTLYYEQKRRMGKLWGDINIKMA
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEE
MVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYTRISSPFTTARYHPILKRYRAHL
EEEECHHHHHHHHHCCEEECCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHC
GIDYAAPTGTPVKSAGKGIVTFIGTKGGYGNVIQIKHDSGYMTLYAHLSRFAKIKNGQKV
CCEECCCCCCCHHHCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
NQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPASVVKIAKSELSGKAKENFKHIIAGYE
CCCCEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QVVKEALASNQPNPPKEEDFENYIEF
HHHHHHHHCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKKLLLLFIFVVQSFAALSVEELTWDNGDTLLKFLQRNSIPMSLYYGLDREDQELASDIA
CHHHHHHHHHHHHHHHHCCHHHEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
YKIKYQVLKDENNNIEQVLIPISDDLQIHIYKDKDRQYTLAFTPVSYQKEDRILHLTIKS
HEEEEEEEECCCCCEEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECC
SAYQDVYEESGSSTLARAMVRAFRGSINFRNIQKGDEVTLYYEQKRRMGKLWGDINIKMA
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEEE
MVEINKSAREVFSYNDIFYDRDGKELESFLLTKPVNYTRISSPFTTARYHPILKRYRAHL
EEEECHHHHHHHHHCCEEECCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHC
GIDYAAPTGTPVKSAGKGIVTFIGTKGGYGNVIQIKHDSGYMTLYAHLSRFAKIKNGQKV
CCEECCCCCCCHHHCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
NQGQVIAYVGSTGMSTGPHLHFGVYLNNKAINPASVVKIAKSELSGKAKENFKHIIAGYE
CCCCEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QVVKEALASNQPNPPKEEDFENYIEF
HHHHHHHHCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]