| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is hisA [H]
Identifier: 57238614
GI number: 57238614
Start: 1670435
End: 1671166
Strand: Direct
Name: hisA [H]
Synonym: CJE1773
Alternate gene names: 57238614
Gene position: 1670435-1671166 (Clockwise)
Preceding gene: 57238613
Following gene: 57238615
Centisome position: 93.96
GC content: 34.56
Gene sequence:
>732_bases ATGACTCAAATCATACCCGCACTCGATCTTATAGATGGCGAAGTGGTGCGTCTTGTAAAAGGGGATTACGAACAAAAAAA AGTATATAAATACAATCCCTTAAAGAAATTTAAAGAATACGAAAAAGCAGGAGCGAAAGAACTTCATCTTGTAGATCTTA CAGGTGCAAAAGATCCTAGCAAAAGACAATTTGCTTTGATAGAAAAATTAGCCAAAGAAGTCAGTGTCAATTTGCAAGTA GGTGGAGGTATACGCTCTAAAGCAGAAGCTAGAGCTTTGCTTGATTGTGGAGTAAAAAGAGTAGTTATAGGATCTATGGC AATTAAAGATGCGACTTTATGTCTTGAAATTTTAAAAGAATTTGGTAGTGAAGCTATAGTTTTAGCCTTAGATACGATTT TAAAAGAAGATTATGTTGTGGCTGTAAATGCTTGGCAAGAAGCAAGCGATAAAAAGCTTATGGAAGTTTTAGATTTTTAT AGCAATAAAGGCTTAAAACACATACTTTGCACAGATATTTCAAAAGATGGCACCATGCAAGGAGTAAATGCAAGACTTTA TAAACTTATCCATGAAATTTTTCCTCATATTTGCATTCAGGCAAGTGGTGGAGTAGCAAGCTTAAAAGACCTTGAAAACT TAAAAGGAATTTGTAGTGGGGTTATCGTAGGAAAAGCTTTATTAGACGGAGTTTTTAGTGTAGAAGAAGGGATAAGATGT CTGGAAAATTGA
Upstream 100 bases:
>100_bases CAAGCGTAATGAAAGATAATTTTTACGGAGTGCAATTTCACCCTGAAAGAAGTAGCGAGGCTGGGGAAATTTTAATTTCA AATTTTATTAAGGATATAGG
Downstream 100 bases:
>100_bases CCTATAAAGAATTAATTATAGAAGTTTTAAAACAAACTAAAAAGCCTTTAAATGTGAGTGAAATTTGGCAAAAAGCTCTT GAAAAAGGCTTAGATAAAAA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQV GGGIRSKAEARALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY SNKGLKHILCTDISKDGTMQGVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGICSGVIVGKALLDGVFSVEEGIRC LEN
Sequences:
>Translated_243_residues MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQV GGGIRSKAEARALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFY SNKGLKHILCTDISKDGTMQGVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGICSGVIVGKALLDGVFSVEEGIRC LEN >Mature_242_residues TQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQVG GGIRSKAEARALLDCGVKRVVIGSMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYS NKGLKHILCTDISKDGTMQGVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGICSGVIVGKALLDGVFSVEEGIRCL EN
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=49.3827160493827, Blast_Score=237, Evalue=6e-64, Organism=Escherichia coli, GI1788336, Length=214, Percent_Identity=28.0373831775701, Blast_Score=75, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26680; Mature: 26548
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPS CCCCCCHHHHHCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCC KRQFALIEKLAKEVSVNLQVGGGIRSKAEARALLDCGVKRVVIGSMAIKDATLCLEILKE HHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQ HCCCEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC GVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGICSGVIVGKALLDGVFSVEEGIRC CHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEN HCC >Mature Secondary Structure TQIIPALDLIDGEVVRLVKGDYEQKKVYKYNPLKKFKEYEKAGAKELHLVDLTGAKDPS CCCCCHHHHHCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCC KRQFALIEKLAKEVSVNLQVGGGIRSKAEARALLDCGVKRVVIGSMAIKDATLCLEILKE HHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH FGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQ HCCCEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC GVNARLYKLIHEIFPHICIQASGGVASLKDLENLKGICSGVIVGKALLDGVFSVEEGIRC CHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEN HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA