Click here to switch to the map view.

The map label for this gene is cas1

Identifier: 57238545

GI number: 57238545

Start: 1594905

End: 1595795

Strand: Reverse

Name: cas1

Synonym: CJE1695

Alternate gene names: NA

Gene position: 1595795-1594905 (Counterclockwise)

Preceding gene: 57238547

Following gene: 57238544

Centisome position: 89.76

GC content: 30.75

Gene sequence:

>891_bases
ATGAGTTACGATGAAGCTTTTAAAACACTGCTTATTAGCTCTAATGCCAAGCTAAATTTAGAGCTAAATCATCTTGTGAT
TAAGCAAGATGAAAATATAGCCAAATTGTTTTTAAAAGATATAAATATCATCGTTTTAGAAAGCTTACAAGTAAGCATTA
GTTCCGCACTTTTTAACGCTTTTGCAAGGCATAAAATCATCTTGCTAACCTGCGATGAAACTCATAGTATAAATGGTGTT
TTTACTCCTTTTTTAGGGCATTTTCAAAGTGCAAAAATCGCAAAAGAGCAAATGAATGTAAGTGCTCAAAAAAAGGCTAT
TTTATGGCAAAAAATCATTAAAAATAAAATCCTAAATCAAGCCTTTATCTTAAAAAAATACAATAAAATAGAGCAAAGCA
ATGAGCTTATAAATTTGGCTAAAAAAGTAAGCTTAAATGATAGTAAAAATATTGAAGCTGTTGCGGCGGCGCTTTATTTT
AAAACTTTGTTTGGGACTTCTTTTTCAAGAGATGAGCTTTGCTTTGAAAATTCTGCTTTAAATTATGGCTATGCAATCAT
TAGGGCTTGTATTATTAGAGCAGTTTGTATAAGTGGGCTTTTGCCTTGGCTTGGCATTAAGCACGATAATATTTATAATT
CTTTTGCGCTTTGTGATGATTTGATAGAAGTGTTTAGGGCTAGTGTTGATGATTGTGTTTTAAAGCTTAAGGGTGAAAGT
GAGTTTTTAAGCAAAGATGACAAAAGAGCGTTGATTGGCAATTTACAAAGCAAAATCAATTTTGATGGGCAAAATTATCC
TTTAAACAGAGCGATAAATCATTATGTGGCAAATTTTAAAAATGCTTTATTGTATGAAGATGAACTAAAGATAGTGAAAT
TTGATGATTGA

Upstream 100 bases:

>100_bases
GCATAGGAATTCAAAATCTAAAAGTATTTGAAAAATACATAGTTTCAGCACTTGGGGAAGTTACAAAGGCTGAGTTTAGA
CAAAGAGAAGATTTTAAAAA

Downstream 100 bases:

>100_bases
AGATAAATTTATGCGCGTGCTTTTGATGTTTGATGTACCTACTAAAAGTAAAAAAGAGCAAAAACTAGCAAGTAAATTTA
GAAACAATCTTATAAAATTA

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein; Crispr-; CRISPR-Associated Protein Cas1 Family; Cytoplasmic Protein; CRISPR-Associated -Like; CRISPR Associated Protein

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNAFARHKIILLTCDETHSINGV
FTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFILKKYNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
KTLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGES
EFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD

Sequences:

>Translated_296_residues
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNAFARHKIILLTCDETHSINGV
FTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFILKKYNKIEQSNELINLAKKVSLNDSKNIEAVAAALYF
KTLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGES
EFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>Mature_295_residues
SYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNAFARHKIILLTCDETHSINGVF
TPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFILKKYNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFK
TLFGTSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESE
FLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33565; Mature: 33434

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNA
CCHHHHHHHHHEECCCEEEEEEEEEEEECCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
FARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQ
HHHCEEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AFILKKYNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGTSFSRDELCFENSAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
NYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHEEEECCCH
EFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
HHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCEEEEEECC
>Mature Secondary Structure 
SYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSISSALFNA
CHHHHHHHHHEECCCEEEEEEEEEEEECCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
FARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQ
HHHCEEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AFILKKYNKIEQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGTSFSRDELCFENSAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCC
NYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHEEEECCCH
EFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
HHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA